53 lines
1.4 KiB
Text
53 lines
1.4 KiB
Text
--- Makefile.orig Thu Jan 25 13:59:21 2007
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+++ Makefile Thu Jan 25 14:02:58 2007
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@@ -1,11 +1,6 @@
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LIBS = -lm
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BINDIR = ./bin
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-#CFLAGS = -Wall -Wshadow -g
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-CFLAGS = -O -Wall -Wshadow -g
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-#CFLAGS = -fast -inline speed
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-#CFLAGS = -O3 -arch host -fast
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-CC = gcc $(CFLAGS)
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-#CC = cc $(CFLAGS)
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+CFLAGS += -g
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DCC = gcc -g -Wall -DDMALLOC_FUNC_CHECK -ansi -pedantic
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PLUSCC = g++ $(CFLAGS)
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LIBS = -lm -L/usr/local/lib
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@@ -18,29 +13,29 @@
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# The big banana
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recombine : recombine.o jdrop.o rec_modellike.o jworld.o getdata.o \
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traitlike.o getmsatdata.o
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- $(CC) -o recombine recombine.o jdrop.o rec_modellike.o \
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+ $(CC) $(CFLAGS) -o recombine recombine.o jdrop.o rec_modellike.o \
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jworld.o getdata.o traitlike.o getmsatdata.o $(LIBS)
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jworld.o : jworld.c
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- $(CC) -c jworld.c
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+ $(CC) $(CFLAGS) -c jworld.c
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jdrop.o : jdrop.c
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- $(CC) -c jdrop.c
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+ $(CC) $(CFLAGS) -c jdrop.c
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rec_modellike.o : rec_modellike.c
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- $(CC) -c rec_modellike.c
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+ $(CC) $(CFLAGS) -c rec_modellike.c
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recombine.o : recombine.c
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- $(CC) -c recombine.c
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+ $(CC) $(CFLAGS) -c recombine.c
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getdata.o : getdata.c
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- $(CC) -c getdata.c
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+ $(CC) $(CFLAGS) -c getdata.c
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getmsatdata.o : getmsatdata.c
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- $(CC) -c getmsatdata.c
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+ $(CC) $(CFLAGS) -c getmsatdata.c
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traitlike.o : traitlike.c
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- $(CC) -c traitlike.c
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+ $(CC) $(CFLAGS) -c traitlike.c
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rectreedna : rectreedna.c
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$(CC) -o rectreedna rectreedna.c $(LIBS)
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