freebsd-ports/biology/artemis/pkg-plist
Kevin Lo 30d7b16772 Initial import of artemis 4.0
Artemis is a  DNA sequence viewer and annotation tool.

PR: 32914
Submitted by: Camson <chuynh@biolateral.com.au>
2001-12-22 14:39:40 +00:00

1486 lines
66 KiB
Text

artemis-4.0/CVS/Root
artemis-4.0/CVS/Repository
artemis-4.0/CVS/Entries
artemis-4.0/.cvsignore
artemis-4.0/AppGlobal.java
artemis-4.0/COPYING
artemis-4.0/COPYING.JacORB
artemis-4.0/CorbaApplet.java
artemis-4.0/Diana.java
artemis-4.0/INSTALL
artemis-4.0/Makefile
artemis-4.0/README
artemis-4.0/art
artemis-4.0/art.bat
artemis-4.0/mart
artemis-4.0/results_to_netscape
artemis-4.0/run_blast
artemis-4.0/run_blastn
artemis-4.0/run_blastp
artemis-4.0/run_blastx
artemis-4.0/run_fasta
artemis-4.0/run_hth
artemis-4.0/run_jalview
artemis-4.0/run_sigcleave
artemis-4.0/run_tblastn
artemis-4.0/run_tblastx
artemis-4.0/META-INF/CVS/Root
artemis-4.0/META-INF/CVS/Repository
artemis-4.0/META-INF/CVS/Entries
artemis-4.0/META-INF/MANIFEST.MF
artemis-4.0/collections/CVS/Root
artemis-4.0/collections/CVS/Repository
artemis-4.0/collections/CVS/Entries
artemis-4.0/collections/ArrayEnumeration.java
artemis-4.0/collections/Assertable.java
artemis-4.0/collections/Bag.java
artemis-4.0/collections/BinaryFunction.java
artemis-4.0/collections/CEImpl.java
artemis-4.0/collections/CLCell.java
artemis-4.0/collections/CLEnumeration.java
artemis-4.0/collections/Cell.java
artemis-4.0/collections/CheckedBag.java
artemis-4.0/collections/CheckedCollection.java
artemis-4.0/collections/CheckedMap.java
artemis-4.0/collections/CheckedSeq.java
artemis-4.0/collections/CheckedSet.java
artemis-4.0/collections/Keyed.java
artemis-4.0/collections/CircularList.java
artemis-4.0/collections/Collection.java
artemis-4.0/collections/CollectionEnumeration.java
artemis-4.0/collections/Comparator.java
artemis-4.0/collections/Dynarray.java
artemis-4.0/collections/CorruptedEnumerationException.java
artemis-4.0/collections/DAEnumeration.java
artemis-4.0/collections/DefaultComparator.java
artemis-4.0/collections/DefaultImplementations.java
artemis-4.0/collections/ElementSortedCollection.java
artemis-4.0/collections/FilteringEnumeration.java
artemis-4.0/collections/Function.java
artemis-4.0/collections/HTEnumeration.java
artemis-4.0/collections/HTPairEnumeration.java
artemis-4.0/collections/HashTableParams.java
artemis-4.0/collections/HashedMap.java
artemis-4.0/collections/HashedSet.java
artemis-4.0/collections/IllegalElementException.java
artemis-4.0/collections/Immutable.java
artemis-4.0/collections/ImplementationCheckable.java
artemis-4.0/collections/IncrBag.java
artemis-4.0/collections/ImplementationError.java
artemis-4.0/collections/IncrCollectionEnumeration.java
artemis-4.0/collections/IncrImpl.java
artemis-4.0/collections/IncrMap.java
artemis-4.0/collections/IncrSeq.java
artemis-4.0/collections/IncrSet.java
artemis-4.0/collections/InterleavingEnumeration.java
artemis-4.0/collections/KeySortedCollection.java
artemis-4.0/collections/LBEnumeration.java
artemis-4.0/collections/LLCell.java
artemis-4.0/collections/LLCellEnumeration.java
artemis-4.0/collections/LLMap.java
artemis-4.0/collections/LLPair.java
artemis-4.0/collections/LLPairEnumeration.java
artemis-4.0/collections/LinkedBuffer.java
artemis-4.0/collections/LinkedList.java
artemis-4.0/collections/Map.java
artemis-4.0/collections/MappingEnumeration.java
artemis-4.0/collections/Pair.java
artemis-4.0/collections/Predicate.java
artemis-4.0/collections/Procedure.java
artemis-4.0/collections/RBCell.java
artemis-4.0/collections/RBCellEnumeration.java
artemis-4.0/collections/RBMap.java
artemis-4.0/collections/RBPair.java
artemis-4.0/collections/RBPairEnumeration.java
artemis-4.0/collections/RBTree.java
artemis-4.0/collections/Seq.java
artemis-4.0/collections/Set.java
artemis-4.0/collections/SimpleTest.java
artemis-4.0/collections/SortableCollection.java
artemis-4.0/collections/UpdatableBag.java
artemis-4.0/collections/UpdatableBagImpl.java
artemis-4.0/collections/UpdatableCollection.java
artemis-4.0/collections/UpdatableImpl.java
artemis-4.0/collections/UpdatableMap.java
artemis-4.0/collections/UpdatableMapImpl.java
artemis-4.0/collections/javaMake
artemis-4.0/collections/UpdatableSeq.java
artemis-4.0/collections/UpdatableSeqImpl.java
artemis-4.0/collections/UpdatableSet.java
artemis-4.0/collections/UpdatableSetImpl.java
artemis-4.0/collections/collections_Dynarray.h
artemis-4.0/collections/Dynarray.class
artemis-4.0/collections/UpdatableSeqImpl.class
artemis-4.0/collections/UpdatableSeq.class
artemis-4.0/collections/SortableCollection.class
artemis-4.0/collections/Seq.class
artemis-4.0/collections/UpdatableImpl.class
artemis-4.0/collections/UpdatableCollection.class
artemis-4.0/collections/IllegalElementException.class
artemis-4.0/collections/CorruptedEnumerationException.class
artemis-4.0/collections/ImplementationError.class
artemis-4.0/collections/Collection.class
artemis-4.0/collections/Assertable.class
artemis-4.0/collections/ImplementationCheckable.class
artemis-4.0/collections/Comparator.class
artemis-4.0/collections/Predicate.class
artemis-4.0/collections/CollectionEnumeration.class
artemis-4.0/collections/DAEnumeration.class
artemis-4.0/collections/CEImpl.class
artemis-4.0/collections/KeySortedCollection.class
artemis-4.0/collections/Map.class
artemis-4.0/collections/ElementSortedCollection.class
artemis-4.0/collections/Bag.class
artemis-4.0/collections/Set.class
artemis-4.0/collections/RBTree.class
artemis-4.0/collections/UpdatableBagImpl.class
artemis-4.0/collections/UpdatableBag.class
artemis-4.0/collections/RBCell.class
artemis-4.0/collections/Cell.class
artemis-4.0/collections/DefaultComparator.class
artemis-4.0/collections/RBCellEnumeration.class
artemis-4.0/collections/Keyed.class
artemis-4.0/corba/CVS/Root
artemis-4.0/corba/CVS/Repository
artemis-4.0/corba/CVS/Entries
artemis-4.0/corba/apollo.idl
artemis-4.0/corba/ensembl.idl
artemis-4.0/corba/nsdb.idl
artemis-4.0/corba/nsdb_write.idl
artemis-4.0/corba/seqdb.idl
artemis-4.0/corba/types.idl
artemis-4.0/diana/CVS/Root
artemis-4.0/diana/CVS/Repository
artemis-4.0/diana/CVS/Entries
artemis-4.0/diana/AlignMatch.java
artemis-4.0/diana/AlignMatchVector.java
artemis-4.0/diana/ChangeEvent.java
artemis-4.0/diana/ChangeListener.java
artemis-4.0/diana/ClipBoard.java
artemis-4.0/diana/ComparisonData.java
artemis-4.0/diana/ComparisonDataFactory.java
artemis-4.0/diana/ComparisonDataParseException.java
artemis-4.0/diana/Entry.java
artemis-4.0/diana/EntryChangeEvent.java
artemis-4.0/diana/EntryChangeListener.java
artemis-4.0/diana/EntryGroup.java
artemis-4.0/diana/EntryGroupChangeEvent.java
artemis-4.0/diana/EntryGroupChangeListener.java
artemis-4.0/diana/EntrySource.java
artemis-4.0/diana/plot/CVS/Root
artemis-4.0/diana/plot/CVS/Repository
artemis-4.0/diana/plot/CVS/Entries
artemis-4.0/diana/plot/AGWindowAlgorithm.java
artemis-4.0/diana/plot/ATDeviationAlgorithm.java
artemis-4.0/diana/plot/Algorithm.java
artemis-4.0/diana/plot/BaseAlgorithm.java
artemis-4.0/diana/plot/Codon12CorrelationAlgorithm.java
artemis-4.0/diana/plot/CodonUsageAlgorithm.java
artemis-4.0/diana/plot/CodonUsageFormatException.java
artemis-4.0/diana/plot/CodonUsageWeight.java
artemis-4.0/diana/plot/CodonWeight.java
artemis-4.0/diana/plot/CoilFeatureAlgorithm.java
artemis-4.0/diana/plot/HydroAlgorithm.java
artemis-4.0/diana/plot/FeatureAlgorithm.java
artemis-4.0/diana/plot/GCDeviationAlgorithm.java
artemis-4.0/diana/plot/GCFrameAlgorithm.java
artemis-4.0/diana/plot/GCSDWindowAlgorithm.java
artemis-4.0/diana/plot/GCWindowAlgorithm.java
artemis-4.0/diana/plot/HydrophilicityAlgorithm.java
artemis-4.0/diana/plot/HydrophobicityAlgorithm.java
artemis-4.0/diana/plot/UserDataAlgorithm.java
artemis-4.0/diana/plot/CodonUsageAlgorithm.class
artemis-4.0/diana/plot/BaseAlgorithm.class
artemis-4.0/diana/plot/Algorithm.class
artemis-4.0/diana/plot/UserDataAlgorithm.class
artemis-4.0/diana/plot/CodonUsageWeight.class
artemis-4.0/diana/plot/CodonWeight.class
artemis-4.0/diana/plot/GCWindowAlgorithm.class
artemis-4.0/diana/plot/GCSDWindowAlgorithm.class
artemis-4.0/diana/plot/AGWindowAlgorithm.class
artemis-4.0/diana/plot/GCFrameAlgorithm.class
artemis-4.0/diana/plot/Codon12CorrelationAlgorithm.class
artemis-4.0/diana/plot/GCDeviationAlgorithm.class
artemis-4.0/diana/plot/ATDeviationAlgorithm.class
artemis-4.0/diana/plot/CodonUsageFormatException.class
artemis-4.0/diana/plot/FeatureAlgorithm.class
artemis-4.0/diana/plot/HydroAlgorithm.class
artemis-4.0/diana/plot/HydrophobicityAlgorithm.class
artemis-4.0/diana/plot/HydrophilicityAlgorithm.class
artemis-4.0/diana/plot/CoilFeatureAlgorithm.class
artemis-4.0/diana/EntrySourceVector.java
artemis-4.0/diana/EntryVector.java
artemis-4.0/diana/ExternalApplication.java
artemis-4.0/diana/ExternalProgram.java
artemis-4.0/diana/ExternalProgramException.java
artemis-4.0/diana/ExternalProgramVector.java
artemis-4.0/diana/ExternalSearchProgram.java
artemis-4.0/diana/Feature.java
artemis-4.0/diana/FeatureChangeEvent.java
artemis-4.0/diana/FeatureChangeListener.java
artemis-4.0/diana/FeatureEnumeration.java
artemis-4.0/diana/FeatureFromVectorPredicate.java
artemis-4.0/diana/FeatureKeyPredicate.java
artemis-4.0/diana/FeatureKeyQualifierPredicate.java
artemis-4.0/diana/FeatureSegment.java
artemis-4.0/diana/FeaturePredicate.java
artemis-4.0/diana/FeatureSegmentVector.java
artemis-4.0/diana/FeatureVector.java
artemis-4.0/diana/FilteredEntryGroup.java
artemis-4.0/diana/GotoEvent.java
artemis-4.0/diana/GotoEventSource.java
artemis-4.0/diana/GotoListener.java
artemis-4.0/diana/LastSegmentException.java
artemis-4.0/diana/Logger.java
artemis-4.0/diana/MSPcrunchComparisonData.java
artemis-4.0/diana/MUMmerComparisonData.java
artemis-4.0/diana/Options.java
artemis-4.0/diana/Selectable.java
artemis-4.0/diana/Selection.java
artemis-4.0/diana/SelectionChangeEvent.java
artemis-4.0/diana/SelectionChangeListener.java
artemis-4.0/diana/helix.gif
artemis-4.0/diana/SimpleComparisonData.java
artemis-4.0/diana/SimpleEntryGroup.java
artemis-4.0/diana/SimpleGotoEventSource.java
artemis-4.0/diana/sanger-centre.gif
artemis-4.0/diana/components/CVS/Root
artemis-4.0/diana/components/CVS/Repository
artemis-4.0/diana/components/CVS/Entries
artemis-4.0/diana/components/ActMain.java
artemis-4.0/diana/components/AddMenu.java
artemis-4.0/diana/components/AlignmentViewer.java
artemis-4.0/diana/components/ArtemisMain.java
artemis-4.0/diana/components/BasePlot.java
artemis-4.0/diana/components/BasePlotGroup.java
artemis-4.0/diana/components/CanvasPanel.java
artemis-4.0/diana/components/Comparator.java
artemis-4.0/diana/components/ComparatorDialog.java
artemis-4.0/diana/components/CorbaEntrySource.java
artemis-4.0/diana/components/DisplayAdjustmentEvent.java
artemis-4.0/diana/components/DisplayAdjustmentListener.java
artemis-4.0/diana/components/DisplayComponent.java
artemis-4.0/diana/components/EMBLCorbaEntrySource.java
artemis-4.0/diana/components/EditMenu.java
artemis-4.0/diana/components/EnsemblEntrySource.java
artemis-4.0/diana/components/EntryActionListener.java
artemis-4.0/diana/components/EntryEdit.java
artemis-4.0/diana/components/EntryEditVector.java
artemis-4.0/diana/components/EntryFileDialog.java
artemis-4.0/diana/components/EntryGroupDisplay.java
artemis-4.0/diana/components/EntryGroupInfoDisplay.java
artemis-4.0/diana/components/EntryGroupMenu.java
artemis-4.0/diana/components/EntryGroupPanel.java
artemis-4.0/diana/components/EntryHeaderEdit.java
artemis-4.0/diana/components/ExternalProgramOptions.java
artemis-4.0/diana/components/FeatureAminoAcidViewer.java
artemis-4.0/diana/components/FeatureBaseViewer.java
artemis-4.0/diana/components/FeatureDisplay.java
artemis-4.0/diana/components/FeatureDisplayOwner.java
artemis-4.0/diana/components/FeatureEdit.java
artemis-4.0/diana/components/FeatureInfo.java
artemis-4.0/diana/components/FeatureList.java
artemis-4.0/diana/components/FeatureListFrame.java
artemis-4.0/diana/components/FeaturePlot.java
artemis-4.0/diana/components/FeaturePlotGroup.java
artemis-4.0/diana/components/FeaturePopup.java
artemis-4.0/diana/components/FeatureViewer.java
artemis-4.0/diana/components/FileDialogEntrySource.java
artemis-4.0/diana/components/FileViewer.java
artemis-4.0/diana/components/GotoMenu.java
artemis-4.0/diana/components/KeyChoice.java
artemis-4.0/diana/components/KeyChooser.java
artemis-4.0/diana/components/ListDialog.java
artemis-4.0/diana/components/LogViewer.java
artemis-4.0/diana/components/MarkerRangeRequester.java
artemis-4.0/diana/components/MarkerRangeRequesterEvent.java
artemis-4.0/diana/components/MarkerRangeRequesterListener.java
artemis-4.0/diana/components/MessageDialog.java
artemis-4.0/diana/components/MessageFrame.java
artemis-4.0/diana/components/Navigator.java
artemis-4.0/diana/components/Plot.java
artemis-4.0/diana/components/PlotMouseListener.java
artemis-4.0/diana/components/ProcessWatcher.java
artemis-4.0/diana/components/ProcessWatcherEvent.java
artemis-4.0/diana/components/ProcessWatcherListener.java
artemis-4.0/diana/components/QualifierChoice.java
artemis-4.0/diana/components/RawFeatureEdit.java
artemis-4.0/diana/components/RunMenu.java
artemis-4.0/diana/components/ScoreChangeEvent.java
artemis-4.0/diana/components/ScoreChangeListener.java
artemis-4.0/diana/components/ScoreChanger.java
artemis-4.0/diana/components/ScoreScrollbar.java
artemis-4.0/diana/components/SearchResultViewer.java
artemis-4.0/diana/components/SelectMenu.java
artemis-4.0/diana/components/SelectionInfoDisplay.java
artemis-4.0/diana/components/SelectionMenu.java
artemis-4.0/diana/components/SelectionViewer.java
artemis-4.0/diana/components/Selector.java
artemis-4.0/diana/components/SequenceViewer.java
artemis-4.0/diana/components/Splash.java
artemis-4.0/diana/components/TextDialog.java
artemis-4.0/diana/components/TextRequester.java
artemis-4.0/diana/components/TextRequesterEvent.java
artemis-4.0/diana/components/TextRequesterListener.java
artemis-4.0/diana/components/ViewMenu.java
artemis-4.0/diana/components/WritableEMBLCorbaEntrySource.java
artemis-4.0/diana/components/WriteMenu.java
artemis-4.0/diana/components/Plot.class
artemis-4.0/diana/components/YesNoDialog.java
artemis-4.0/diana/components/ArtemisMain.class
artemis-4.0/diana/components/ArtemisMain$1.class
artemis-4.0/diana/components/ArtemisMain$2.class
artemis-4.0/diana/components/ArtemisMain$3.class
artemis-4.0/diana/components/ArtemisMain$4.class
artemis-4.0/diana/components/ArtemisMain$5.class
artemis-4.0/diana/components/ArtemisMain$6.class
artemis-4.0/diana/components/Splash.class
artemis-4.0/diana/components/Splash$1.class
artemis-4.0/diana/components/Splash$2.class
artemis-4.0/diana/components/Splash$3.class
artemis-4.0/diana/components/EntryEditVector.class
artemis-4.0/diana/components/LogViewer.class
artemis-4.0/diana/components/LogViewer$1.class
artemis-4.0/diana/components/EntryEdit.class
artemis-4.0/diana/components/EntryEdit$1.class
artemis-4.0/diana/components/EntryEdit$2.class
artemis-4.0/diana/components/EntryEdit$3.class
artemis-4.0/diana/components/EntryEdit$4.class
artemis-4.0/diana/components/EntryEdit$5.class
artemis-4.0/diana/components/EntryEdit$6.class
artemis-4.0/diana/components/EntryEdit$7.class
artemis-4.0/diana/components/EntryEdit$8.class
artemis-4.0/diana/components/EntryEdit$9.class
artemis-4.0/diana/components/EntryEdit$10.class
artemis-4.0/diana/components/EntryEdit$11.class
artemis-4.0/diana/components/EntryEdit$12.class
artemis-4.0/diana/components/EntryEdit$13.class
artemis-4.0/diana/components/EntryEdit$14.class
artemis-4.0/diana/components/EntryEdit$15.class
artemis-4.0/diana/components/ReadFeaturesActionListener.class
artemis-4.0/diana/components/SaveEntryActionListener.class
artemis-4.0/diana/components/SaveEntryAsActionListener.class
artemis-4.0/diana/components/SaveEntryAsEMBLActionListener.class
artemis-4.0/diana/components/SaveEntryAsGenbankActionListener.class
artemis-4.0/diana/components/SaveEntryAsGFFActionListener.class
artemis-4.0/diana/components/SaveEntryAsSubmissionActionListener.class
artemis-4.0/diana/components/MessageDialog.class
artemis-4.0/diana/components/FeatureDisplayOwner.class
artemis-4.0/diana/components/EntryFileDialog.class
artemis-4.0/diana/components/MessageDialog$1.class
artemis-4.0/diana/components/MessageDialog$2.class
artemis-4.0/diana/components/MessageDialog$3.class
artemis-4.0/diana/components/FileDialogEntrySource.class
artemis-4.0/diana/components/EMBLCorbaEntrySource.class
artemis-4.0/diana/components/CorbaEntrySource.class
artemis-4.0/diana/components/WritableEMBLCorbaEntrySource.class
artemis-4.0/diana/components/FileViewer.class
artemis-4.0/diana/components/FileViewer$1.class
artemis-4.0/diana/components/FileViewer$2.class
artemis-4.0/diana/components/FileViewer$3.class
artemis-4.0/diana/components/MessageFrame.class
artemis-4.0/diana/components/MessageFrame$1.class
artemis-4.0/diana/components/MessageFrame$2.class
artemis-4.0/diana/components/MessageFrame$3.class
artemis-4.0/diana/components/ViewMenu.class
artemis-4.0/diana/components/ViewMenu$1.class
artemis-4.0/diana/components/ViewMenu$2.class
artemis-4.0/diana/components/ViewMenu$3.class
artemis-4.0/diana/components/ViewMenu$4.class
artemis-4.0/diana/components/ViewMenu$5.class
artemis-4.0/diana/components/ViewMenu$6.class
artemis-4.0/diana/components/ViewMenu$7.class
artemis-4.0/diana/components/ViewMenu$8.class
artemis-4.0/diana/components/ViewMenu$9.class
artemis-4.0/diana/components/ViewMenu$10.class
artemis-4.0/diana/components/ViewMenu$11.class
artemis-4.0/diana/components/ViewMenu$12.class
artemis-4.0/diana/components/ViewMenu$13.class
artemis-4.0/diana/components/ViewMenu$14.class
artemis-4.0/diana/components/ViewMenu$15.class
artemis-4.0/diana/components/ViewMenu$16.class
artemis-4.0/diana/components/ViewMenu$17.class
artemis-4.0/diana/components/ViewMenu$18.class
artemis-4.0/diana/components/ViewMenu$19.class
artemis-4.0/diana/components/ViewMenu$20.class
artemis-4.0/diana/components/ViewMenu$21.class
artemis-4.0/diana/components/ViewMenu$22.class
artemis-4.0/diana/components/ViewMenu$23.class
artemis-4.0/diana/components/ViewMenu$24.class
artemis-4.0/diana/components/ViewMenu$25.class
artemis-4.0/diana/components/ViewMenu$26.class
artemis-4.0/diana/components/ViewMenu$27.class
artemis-4.0/diana/components/ViewMenu$28.class
artemis-4.0/diana/components/ViewMenu$29.class
artemis-4.0/diana/components/SelectionMenu.class
artemis-4.0/diana/components/AddMenu.class
artemis-4.0/diana/components/AddMenu$1.class
artemis-4.0/diana/components/AddMenu$2.class
artemis-4.0/diana/components/AddMenu$3.class
artemis-4.0/diana/components/AddMenu$4.class
artemis-4.0/diana/components/AddMenu$5.class
artemis-4.0/diana/components/AddMenu$6.class
artemis-4.0/diana/components/AddMenu$7.class
artemis-4.0/diana/components/AddMenu$8.class
artemis-4.0/diana/components/AddMenu$9.class
artemis-4.0/diana/components/AddMenu$10.class
artemis-4.0/diana/components/AddMenu$11.class
artemis-4.0/diana/components/AddMenu$12.class
artemis-4.0/diana/components/AddMenu$13.class
artemis-4.0/diana/components/AddMenu$14.class
artemis-4.0/diana/components/AddMenu$15.class
artemis-4.0/diana/components/EntryGroupDisplay.class
artemis-4.0/diana/components/EntryGroupDisplay$1.class
artemis-4.0/diana/components/EntryGroupDisplay$2.class
artemis-4.0/diana/components/FeatureDisplay.class
artemis-4.0/diana/components/GotoMenu.class
artemis-4.0/diana/components/FeatureDisplay$1.class
artemis-4.0/diana/components/FeatureDisplay$2.class
artemis-4.0/diana/components/EditMenu.class
artemis-4.0/diana/components/FeatureDisplay$3.class
artemis-4.0/diana/components/FeatureDisplay$4.class
artemis-4.0/diana/components/FeatureDisplay$5.class
artemis-4.0/diana/components/FeatureDisplay$6.class
artemis-4.0/diana/components/EntryGroupPanel.class
artemis-4.0/diana/components/DisplayComponent.class
artemis-4.0/diana/components/EntryGroupPanel$1.class
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artemis-4.0/diana/sequence/Marker.java
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artemis-4.0/uk/ac/sanger/pathogens/embl/EnsemblCorbaEntry.java
artemis-4.0/uk/ac/sanger/pathogens/embl/EnsemblCorbaFeature.java
artemis-4.0/uk/ac/sanger/pathogens/embl/EnsemblCorbaSequence.java
artemis-4.0/uk/ac/sanger/pathogens/embl/EntryInformation.java
artemis-4.0/uk/ac/sanger/pathogens/embl/EntryInformationException.java
artemis-4.0/uk/ac/sanger/pathogens/embl/FastaStreamSequence.java
artemis-4.0/uk/ac/sanger/pathogens/embl/Feature.java
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureComparator.java
artemis-4.0/uk/ac/sanger/pathogens/embl/Key.java
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureEnumeration.java
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureHeader.java
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureTable.java
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureTree.java
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureVector.java
artemis-4.0/uk/ac/sanger/pathogens/embl/FuzzyRange.java
artemis-4.0/uk/ac/sanger/pathogens/embl/GFFDocumentEntry.java
artemis-4.0/uk/ac/sanger/pathogens/embl/GFFMisc.java
artemis-4.0/uk/ac/sanger/pathogens/embl/GFFEntryInformation.java
artemis-4.0/uk/ac/sanger/pathogens/embl/GFFStreamFeature.java
artemis-4.0/uk/ac/sanger/pathogens/embl/GenbankDocumentEntry.java
artemis-4.0/uk/ac/sanger/pathogens/embl/GenbankMisc.java
artemis-4.0/uk/ac/sanger/pathogens/embl/GenbankStreamFeature.java
artemis-4.0/uk/ac/sanger/pathogens/embl/GenbankStreamSequence.java
artemis-4.0/uk/ac/sanger/pathogens/embl/InvalidKeyException.java
artemis-4.0/uk/ac/sanger/pathogens/embl/InvalidQualifierException.java
artemis-4.0/uk/ac/sanger/pathogens/embl/InvalidRelationException.java
artemis-4.0/uk/ac/sanger/pathogens/embl/KeyVector.java
artemis-4.0/uk/ac/sanger/pathogens/embl/LineGroup.java
artemis-4.0/uk/ac/sanger/pathogens/embl/LineGroupVector.java
artemis-4.0/uk/ac/sanger/pathogens/embl/LinePushBackReader.java
artemis-4.0/uk/ac/sanger/pathogens/embl/Location.java
artemis-4.0/uk/ac/sanger/pathogens/embl/LocationLexer.java
artemis-4.0/uk/ac/sanger/pathogens/embl/Qualifier.java
artemis-4.0/uk/ac/sanger/pathogens/embl/LocationParseException.java
artemis-4.0/uk/ac/sanger/pathogens/embl/LocationParseNode.java
artemis-4.0/uk/ac/sanger/pathogens/embl/LocationParseNodeVector.java
artemis-4.0/uk/ac/sanger/pathogens/embl/LowerInteger.java
artemis-4.0/uk/ac/sanger/pathogens/embl/MSPcrunchDocumentEntry.java
artemis-4.0/uk/ac/sanger/pathogens/embl/MSPcrunchEntryInformation.java
artemis-4.0/uk/ac/sanger/pathogens/embl/MSPcrunchStreamFeature.java
artemis-4.0/uk/ac/sanger/pathogens/embl/MiscLineGroup.java
artemis-4.0/uk/ac/sanger/pathogens/embl/OutOfDateException.java
artemis-4.0/uk/ac/sanger/pathogens/embl/PublicDBDocumentEntry.java
artemis-4.0/uk/ac/sanger/pathogens/embl/PublicDBStreamFeature.java
artemis-4.0/uk/ac/sanger/pathogens/embl/PushBackException.java
artemis-4.0/uk/ac/sanger/pathogens/embl/QualifierInfo.java
artemis-4.0/uk/ac/sanger/pathogens/embl/QualifierInfoException.java
artemis-4.0/uk/ac/sanger/pathogens/embl/QualifierInfoVector.java
artemis-4.0/uk/ac/sanger/pathogens/embl/QualifierParseException.java
artemis-4.0/uk/ac/sanger/pathogens/embl/QualifierVector.java
artemis-4.0/uk/ac/sanger/pathogens/embl/RWCorbaEntry.java
artemis-4.0/uk/ac/sanger/pathogens/embl/RWCorbaFeature.java
artemis-4.0/uk/ac/sanger/pathogens/embl/Range.java
artemis-4.0/uk/ac/sanger/pathogens/embl/RangeVector.java
artemis-4.0/uk/ac/sanger/pathogens/embl/RawStreamSequence.java
artemis-4.0/uk/ac/sanger/pathogens/embl/ReadFormatException.java
artemis-4.0/uk/ac/sanger/pathogens/embl/ReadOnlyEntry.java
artemis-4.0/uk/ac/sanger/pathogens/embl/Sequence.java
artemis-4.0/uk/ac/sanger/pathogens/embl/SimpleDocumentEntry.java
artemis-4.0/uk/ac/sanger/pathogens/embl/SimpleDocumentFeature.java
artemis-4.0/uk/ac/sanger/pathogens/embl/SimpleEntryInformation.java
artemis-4.0/uk/ac/sanger/pathogens/embl/StreamFeature.java
artemis-4.0/uk/ac/sanger/pathogens/embl/StreamFeatureTable.java
artemis-4.0/uk/ac/sanger/pathogens/embl/StreamQualifier.java
artemis-4.0/uk/ac/sanger/pathogens/embl/StreamSequence.java
artemis-4.0/uk/ac/sanger/pathogens/embl/UpperInteger.java
artemis-4.0/uk/ac/sanger/pathogens/embl/StreamSequenceFactory.java
artemis-4.0/uk/ac/sanger/pathogens/embl/embl.example
artemis-4.0/uk/ac/sanger/pathogens/embl/Key.class
artemis-4.0/uk/ac/sanger/pathogens/embl/KeyVector.class
artemis-4.0/uk/ac/sanger/pathogens/embl/EntryInformation.class
artemis-4.0/uk/ac/sanger/pathogens/embl/QualifierInfoException.class
artemis-4.0/uk/ac/sanger/pathogens/embl/SimpleEntryInformation.class
artemis-4.0/uk/ac/sanger/pathogens/embl/QualifierInfo.class
artemis-4.0/uk/ac/sanger/pathogens/embl/QualifierInfoVector.class
artemis-4.0/uk/ac/sanger/pathogens/embl/DocumentEntryFactory.class
artemis-4.0/uk/ac/sanger/pathogens/embl/EntryInformationException.class
artemis-4.0/uk/ac/sanger/pathogens/embl/InvalidKeyException.class
artemis-4.0/uk/ac/sanger/pathogens/embl/Entry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/ReadFormatException.class
artemis-4.0/uk/ac/sanger/pathogens/embl/InvalidRelationException.class
artemis-4.0/uk/ac/sanger/pathogens/embl/Qualifier.class
artemis-4.0/uk/ac/sanger/pathogens/embl/InvalidQualifierException.class
artemis-4.0/uk/ac/sanger/pathogens/embl/EmblStreamFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/PublicDBStreamFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/SimpleDocumentFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/DocumentFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/StreamFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/ComparableFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/LineGroup.class
artemis-4.0/uk/ac/sanger/pathogens/embl/Feature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/EMBLObject.class
artemis-4.0/uk/ac/sanger/pathogens/embl/QualifierParseException.class
artemis-4.0/uk/ac/sanger/pathogens/embl/DocumentEntry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/EmblDocumentEntry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/PublicDBDocumentEntry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/SimpleDocumentEntry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/Range.class
artemis-4.0/uk/ac/sanger/pathogens/embl/SimpleDocumentEntry$1.class
artemis-4.0/uk/ac/sanger/pathogens/embl/RangeVector.class
artemis-4.0/uk/ac/sanger/pathogens/embl/Location.class
artemis-4.0/uk/ac/sanger/pathogens/embl/LocationLexer.class
artemis-4.0/uk/ac/sanger/pathogens/embl/LocationLexer$TokenEnumeration.class
artemis-4.0/uk/ac/sanger/pathogens/embl/LocationParseException.class
artemis-4.0/uk/ac/sanger/pathogens/embl/QualifierVector.class
artemis-4.0/uk/ac/sanger/pathogens/embl/Sequence.class
artemis-4.0/uk/ac/sanger/pathogens/embl/EmblStreamSequence.class
artemis-4.0/uk/ac/sanger/pathogens/embl/StreamSequence.class
artemis-4.0/uk/ac/sanger/pathogens/embl/FastaStreamSequence.class
artemis-4.0/uk/ac/sanger/pathogens/embl/RawStreamSequence.class
artemis-4.0/uk/ac/sanger/pathogens/embl/StreamQualifier.class
artemis-4.0/uk/ac/sanger/pathogens/embl/OutOfDateException.class
artemis-4.0/uk/ac/sanger/pathogens/embl/LinePushBackReader.class
artemis-4.0/uk/ac/sanger/pathogens/embl/PushBackException.class
artemis-4.0/uk/ac/sanger/pathogens/embl/DateStampFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/GenbankStreamFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/GFFStreamFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/FuzzyRange.class
artemis-4.0/uk/ac/sanger/pathogens/embl/GenbankStreamSequence.class
artemis-4.0/uk/ac/sanger/pathogens/embl/StreamSequenceFactory.class
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureHeader.class
artemis-4.0/uk/ac/sanger/pathogens/embl/EmblMisc.class
artemis-4.0/uk/ac/sanger/pathogens/embl/MiscLineGroup.class
artemis-4.0/uk/ac/sanger/pathogens/embl/MSPcrunchStreamFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/GenbankMisc.class
artemis-4.0/uk/ac/sanger/pathogens/embl/GFFMisc.class
artemis-4.0/uk/ac/sanger/pathogens/embl/GFFDocumentEntry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/MSPcrunchDocumentEntry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/GenbankDocumentEntry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureVector.class
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureEnumeration.class
artemis-4.0/uk/ac/sanger/pathogens/embl/LocationParseNode.class
artemis-4.0/uk/ac/sanger/pathogens/embl/LineGroupVector.class
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureTable.class
artemis-4.0/uk/ac/sanger/pathogens/embl/StreamFeatureTable.class
artemis-4.0/uk/ac/sanger/pathogens/embl/DocumentEntryAutosaveThread.class
artemis-4.0/uk/ac/sanger/pathogens/embl/LowerInteger.class
artemis-4.0/uk/ac/sanger/pathogens/embl/UpperInteger.class
artemis-4.0/uk/ac/sanger/pathogens/embl/LocationParseNodeVector.class
artemis-4.0/uk/ac/sanger/pathogens/embl/BetweenRange.class
artemis-4.0/uk/ac/sanger/pathogens/embl/CorbaEntry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/ReadOnlyEntry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/RWCorbaEntry.class
artemis-4.0/uk/ac/sanger/pathogens/embl/RWCorbaEntry$1.class
artemis-4.0/uk/ac/sanger/pathogens/embl/NucFeatureHasher.class
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureTree.class
artemis-4.0/uk/ac/sanger/pathogens/embl/GFFEntryInformation.class
artemis-4.0/uk/ac/sanger/pathogens/embl/MSPcrunchEntryInformation.class
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureTree$FeatureEnumerator.class
artemis-4.0/uk/ac/sanger/pathogens/embl/FeatureComparator.class
artemis-4.0/uk/ac/sanger/pathogens/embl/CorbaSequence.class
artemis-4.0/uk/ac/sanger/pathogens/embl/CorbaFeature.class
artemis-4.0/uk/ac/sanger/pathogens/embl/RWCorbaFeature.class
artemis-4.0/uk/ac/sanger/pathogens/OutOfRangeException.class
artemis-4.0/uk/ac/sanger/pathogens/ReadOnlyException.class
artemis-4.0/uk/ac/sanger/pathogens/StringVector.class
artemis-4.0/uk/ac/sanger/pathogens/InputStreamProgressListener.class
artemis-4.0/uk/ac/sanger/pathogens/StringVector$1.class
artemis-4.0/uk/ac/sanger/pathogens/InputStreamProgressEvent.class
artemis-4.0/uk/ac/sanger/pathogens/Document.class
artemis-4.0/uk/ac/sanger/pathogens/FileDocument.class
artemis-4.0/uk/ac/sanger/pathogens/FastVector.class
artemis-4.0/uk/ac/sanger/pathogens/FileProgressDocument.class
artemis-4.0/uk/ac/sanger/pathogens/ProgressInputStream.class
artemis-4.0/type/stringListHolder.java
artemis-4.0/type/stringListHelper.java
artemis-4.0/type/longListHolder.java
artemis-4.0/type/longListHelper.java
artemis-4.0/type/ulongListHolder.java
artemis-4.0/type/ulongListHelper.java
artemis-4.0/type/NoResult.java
artemis-4.0/type/NoResultHolder.java
artemis-4.0/type/NoResultHelper.java
artemis-4.0/type/NoWritePermission.java
artemis-4.0/type/NoWritePermissionHolder.java
artemis-4.0/type/NoWritePermissionHelper.java
artemis-4.0/type/InvalidRelation.java
artemis-4.0/type/InvalidRelationHolder.java
artemis-4.0/type/InvalidRelationHelper.java
artemis-4.0/type/IndexOutOfRange.java
artemis-4.0/type/IndexOutOfRangeHolder.java
artemis-4.0/type/IndexOutOfRangeHelper.java
artemis-4.0/type/InvalidArgumentValue.java
artemis-4.0/type/InvalidArgumentValueHolder.java
artemis-4.0/type/InvalidArgumentValueHelper.java
artemis-4.0/type/ParseError.java
artemis-4.0/type/ParseErrorHolder.java
artemis-4.0/type/ParseErrorHelper.java
artemis-4.0/type/Date.java
artemis-4.0/type/DateHolder.java
artemis-4.0/type/DateHelper.java
artemis-4.0/type/DateListHolder.java
artemis-4.0/type/DateListHelper.java
artemis-4.0/type/Person.java
artemis-4.0/type/PersonHolder.java
artemis-4.0/type/PersonHelper.java
artemis-4.0/type/PersonListHolder.java
artemis-4.0/type/PersonListHelper.java
artemis-4.0/type/Revision.java
artemis-4.0/type/RevisionHolder.java
artemis-4.0/type/RevisionHelper.java
artemis-4.0/type/RevisionListHolder.java
artemis-4.0/type/RevisionListHelper.java
artemis-4.0/type/DbXref.java
artemis-4.0/type/DbXrefHolder.java
artemis-4.0/type/DbXrefHelper.java
artemis-4.0/type/DbXrefListHolder.java
artemis-4.0/type/DbXrefListHelper.java
artemis-4.0/type/AminoAcid.java
artemis-4.0/type/AminoAcidHolder.java
artemis-4.0/type/AminoAcidHelper.java
artemis-4.0/type/AminoAcidListHolder.java
artemis-4.0/type/AminoAcidListHelper.java
artemis-4.0/type/CodonTranslation.java
artemis-4.0/type/CodonTranslationHolder.java
artemis-4.0/type/CodonTranslationHelper.java
artemis-4.0/type/CodonTranslationListHolder.java
artemis-4.0/type/CodonTranslationListHelper.java
artemis-4.0/type/AntiCodon.java
artemis-4.0/type/AntiCodonHolder.java
artemis-4.0/type/AntiCodonHelper.java
artemis-4.0/type/AntiCodonListHolder.java
artemis-4.0/type/AntiCodonListHelper.java
artemis-4.0/type/TranslationException.java
artemis-4.0/type/TranslationExceptionHolder.java
artemis-4.0/type/TranslationExceptionHelper.java
artemis-4.0/type/RepeatUnit.java
artemis-4.0/type/Exact_ftc.java
artemis-4.0/type/TranslationExceptionListHolder.java
artemis-4.0/type/TranslationExceptionListHelper.java
artemis-4.0/type/SpliceConsensus.java
artemis-4.0/type/SpliceConsensusHolder.java
artemis-4.0/type/SpliceConsensusHelper.java
artemis-4.0/type/SpliceConsensusListHolder.java
artemis-4.0/type/SpliceConsensusListHelper.java
artemis-4.0/type/RepeatUnitHolder.java
artemis-4.0/type/RepeatUnitHelper.java
artemis-4.0/type/RepeatUnitListHolder.java
artemis-4.0/type/RepeatUnitListHelper.java
artemis-4.0/type/FuzzyTypeCodeHelper.java
artemis-4.0/type/In_ftc.java
artemis-4.0/type/Between_ftc.java
artemis-4.0/type/Less_ftc.java
artemis-4.0/type/Greater_ftc.java
artemis-4.0/type/Fuzzy.java
artemis-4.0/type/FuzzyHolder.java
artemis-4.0/type/FuzzyHelper.java
artemis-4.0/type/FuzzyListHolder.java
artemis-4.0/type/FuzzyListHelper.java
artemis-4.0/type/NoResult.class
artemis-4.0/type/InvalidRelation.class
artemis-4.0/type/InvalidArgumentValue.class
artemis-4.0/type/IndexOutOfRange.class
artemis-4.0/type/DbXref.class
artemis-4.0/type/Revision.class
artemis-4.0/type/InvalidRelationHelper.class
artemis-4.0/type/InvalidArgumentValueHelper.class
artemis-4.0/type/IndexOutOfRangeHelper.class
artemis-4.0/type/Date.class
artemis-4.0/type/stringListHelper.class
artemis-4.0/type/NoResultHelper.class
artemis-4.0/type/TranslationException.class
artemis-4.0/type/CodonTranslation.class
artemis-4.0/type/AntiCodon.class
artemis-4.0/type/SpliceConsensus.class
artemis-4.0/type/RepeatUnit.class
artemis-4.0/type/Fuzzy.class
artemis-4.0/type/AminoAcid.class
artemis-4.0/type/DbXrefListHelper.class
artemis-4.0/type/RevisionListHelper.class
artemis-4.0/type/DbXrefHelper.class
artemis-4.0/type/RevisionHelper.class
artemis-4.0/type/DateHelper.class
artemis-4.0/type/RepeatUnitHelper.class
artemis-4.0/type/SpliceConsensusHelper.class
artemis-4.0/type/AntiCodonHelper.class
artemis-4.0/type/CodonTranslationHelper.class
artemis-4.0/type/AminoAcidHelper.class
artemis-4.0/type/TranslationExceptionHelper.class
artemis-4.0/type/FuzzyHelper.class
artemis-4.0/nsdb/NucSeqListHolder.java
artemis-4.0/nsdb/NucSeqListHelper.java
artemis-4.0/nsdb/NucFeatureListHolder.java
artemis-4.0/nsdb/NucFeatureListHelper.java
artemis-4.0/nsdb/LocationListHolder.java
artemis-4.0/nsdb/LocationListHelper.java
artemis-4.0/nsdb/FeatureLocationListHolder.java
artemis-4.0/nsdb/FeatureLocationListHelper.java
artemis-4.0/nsdb/EntryInfoListHolder.java
artemis-4.0/nsdb/EntryInfoListHelper.java
artemis-4.0/nsdb/InexactLocation.java
artemis-4.0/nsdb/InexactLocationHolder.java
artemis-4.0/nsdb/InexactLocationHelper.java
artemis-4.0/nsdb/EntryInfo.java
artemis-4.0/nsdb/EntryInfoOperations.java
artemis-4.0/nsdb/EntryInfoHelper.java
artemis-4.0/nsdb/EntryInfoHolder.java
artemis-4.0/nsdb/_EntryInfoStub.java
artemis-4.0/nsdb/EntryInfoPOA.java
artemis-4.0/nsdb/EntryInfoPOATie.java
artemis-4.0/nsdb/Location.java
artemis-4.0/nsdb/LocationOperations.java
artemis-4.0/nsdb/LocationHelper.java
artemis-4.0/nsdb/LocationHolder.java
artemis-4.0/nsdb/_LocationStub.java
artemis-4.0/nsdb/LocationPOA.java
artemis-4.0/nsdb/LocationPOATie.java
artemis-4.0/nsdb/LocationPackage/IdListHolder.java
artemis-4.0/nsdb/LocationPackage/IdListHelper.java
artemis-4.0/nsdb/LocationPackage/LocNodeTypeCodeHelper.java
artemis-4.0/nsdb/LocationPackage/LocVirtualSegment.java
artemis-4.0/nsdb/LocationPackage/LocVirtualSegmentHolder.java
artemis-4.0/nsdb/LocationPackage/LocVirtualSegmentHelper.java
artemis-4.0/nsdb/LocationPackage/LocGapHolder.java
artemis-4.0/nsdb/LocationPackage/LocGapHelper.java
artemis-4.0/nsdb/LocationPackage/LocPhysicalSegmentHolder.java
artemis-4.0/nsdb/LocationPackage/LocPhysicalSegmentHelper.java
artemis-4.0/nsdb/LocationPackage/LocOperator.java
artemis-4.0/nsdb/LocationPackage/LocOperatorHolder.java
artemis-4.0/nsdb/LocationPackage/LocOperatorHelper.java
artemis-4.0/nsdb/LocationPackage/LocationNode_u.java
artemis-4.0/nsdb/LocationPackage/LocOperator.class
artemis-4.0/nsdb/LocationPackage/LocationNode_uHolder.java
artemis-4.0/nsdb/LocationPackage/LocationNode_uHelper.java
artemis-4.0/nsdb/LocationPackage/LocationNodeListHolder.java
artemis-4.0/nsdb/LocationPackage/LocationNodeListHelper.java
artemis-4.0/nsdb/LocationPackage/LocationNode_u.class
artemis-4.0/nsdb/LocationPackage/LocVirtualSegment.class
artemis-4.0/nsdb/LocationPackage/LocationNodeListHelper.class
artemis-4.0/nsdb/LocationPackage/LocationNode_uHelper.class
artemis-4.0/nsdb/LocationPackage/LocOperatorHelper.class
artemis-4.0/nsdb/LocationPackage/LocGapHelper.class
artemis-4.0/nsdb/LocationPackage/LocPhysicalSegmentHelper.class
artemis-4.0/nsdb/LocationPackage/LocVirtualSegmentHelper.class
artemis-4.0/nsdb/LocationPackage/IdListHelper.class
artemis-4.0/nsdb/FeatureLocation.java
artemis-4.0/nsdb/FeatureLocationOperations.java
artemis-4.0/nsdb/FeatureLocationPOA.java
artemis-4.0/nsdb/FeatureLocationHelper.java
artemis-4.0/nsdb/FeatureLocationHolder.java
artemis-4.0/nsdb/_FeatureLocationStub.java
artemis-4.0/nsdb/FeatureLocationPOATie.java
artemis-4.0/nsdb/NucFeature.java
artemis-4.0/nsdb/NucFeaturePOA.java
artemis-4.0/nsdb/NucFeatureOperations.java
artemis-4.0/nsdb/NucFeatureHelper.java
artemis-4.0/nsdb/NucFeatureHolder.java
artemis-4.0/nsdb/_NucFeatureStub.java
artemis-4.0/nsdb/NucFeaturePOATie.java
artemis-4.0/nsdb/NucFeaturePackage/QualifierTypeCodeHelper.java
artemis-4.0/nsdb/NucFeaturePackage/QualifierValue_u.java
artemis-4.0/nsdb/NucFeaturePackage/QualifierValue_uHolder.java
artemis-4.0/nsdb/NucFeaturePackage/QualifierValue_uHelper.java
artemis-4.0/nsdb/NucFeaturePackage/QualifierValueListHolder.java
artemis-4.0/nsdb/NucFeaturePackage/QualifierValueListHelper.java
artemis-4.0/nsdb/NucFeaturePackage/Qualifier.java
artemis-4.0/nsdb/NucFeaturePackage/QualifierHolder.java
artemis-4.0/nsdb/NucFeaturePackage/QualifierHelper.java
artemis-4.0/nsdb/NucFeaturePackage/QualifierListHolder.java
artemis-4.0/nsdb/NucFeaturePackage/QualifierListHelper.java
artemis-4.0/nsdb/NucFeaturePackage/Qualifier.class
artemis-4.0/nsdb/NucFeaturePackage/QualifierValue_u.class
artemis-4.0/nsdb/NucFeaturePackage/QualifierListHelper.class
artemis-4.0/nsdb/NucFeaturePackage/QualifierHelper.class
artemis-4.0/nsdb/NucFeaturePackage/QualifierValue_uHelper.class
artemis-4.0/nsdb/NucFeaturePackage/QualifierValueListHelper.class
artemis-4.0/nsdb/NucSeq.java
artemis-4.0/nsdb/NucSeqOperations.java
artemis-4.0/nsdb/NucSeqHelper.java
artemis-4.0/nsdb/NucSeqHolder.java
artemis-4.0/nsdb/_NucSeqStub.java
artemis-4.0/nsdb/NucSeqPOA.java
artemis-4.0/nsdb/NucSeqPOATie.java
artemis-4.0/nsdb/Embl.java
artemis-4.0/nsdb/EmblSeq.java
artemis-4.0/nsdb/EmblSeqOperations.java
artemis-4.0/nsdb/EmblSeqHelper.java
artemis-4.0/nsdb/EmblSeqHolder.java
artemis-4.0/nsdb/_EmblSeqStub.java
artemis-4.0/nsdb/EmblSeqPOA.java
artemis-4.0/nsdb/EmblSeqPOATie.java
artemis-4.0/nsdb/EmblOperations.java
artemis-4.0/nsdb/EmblHelper.java
artemis-4.0/nsdb/EmblHolder.java
artemis-4.0/nsdb/_EmblStub.java
artemis-4.0/nsdb/EmblPOA.java
artemis-4.0/nsdb/EmblPOATie.java
artemis-4.0/nsdb/EmblPackage/Superceded.java
artemis-4.0/nsdb/EmblPackage/SupercededHolder.java
artemis-4.0/nsdb/EmblPackage/SupercededHelper.java
artemis-4.0/nsdb/EmblPackage/Superceded.class
artemis-4.0/nsdb/EmblPackage/SupercededHelper.class
artemis-4.0/nsdb/OutOfDate.java
artemis-4.0/nsdb/LocationParse.java
artemis-4.0/nsdb/OutOfDateHolder.java
artemis-4.0/nsdb/OutOfDateHelper.java
artemis-4.0/nsdb/ReadOnlyException.java
artemis-4.0/nsdb/ReadOnlyExceptionHolder.java
artemis-4.0/nsdb/ReadOnlyExceptionHelper.java
artemis-4.0/nsdb/LocationParseHolder.java
artemis-4.0/nsdb/LocationParseHelper.java
artemis-4.0/nsdb/QualifierParse.java
artemis-4.0/nsdb/QualifierParseHolder.java
artemis-4.0/nsdb/QualifierParseHelper.java
artemis-4.0/nsdb/InvalidQualifier.java
artemis-4.0/nsdb/InvalidQualifierHolder.java
artemis-4.0/nsdb/InvalidQualifierHelper.java
artemis-4.0/nsdb/NucFeatureWriterListHolder.java
artemis-4.0/nsdb/NucFeatureWriterListHelper.java
artemis-4.0/nsdb/datestamp_tHelper.java
artemis-4.0/nsdb/Datestamp.java
artemis-4.0/nsdb/DatestampHolder.java
artemis-4.0/nsdb/DatestampHelper.java
artemis-4.0/nsdb/EntryStats.java
artemis-4.0/nsdb/EntryStatsHolder.java
artemis-4.0/nsdb/EntryStatsHelper.java
artemis-4.0/nsdb/ServerInfo.java
artemis-4.0/nsdb/EmblWriter.java
artemis-4.0/nsdb/ServerInfoHolder.java
artemis-4.0/nsdb/ServerInfoHelper.java
artemis-4.0/nsdb/EmblWriterOperations.java
artemis-4.0/nsdb/EmblWriterHelper.java
artemis-4.0/nsdb/EmblWriterHolder.java
artemis-4.0/nsdb/_EmblWriterStub.java
artemis-4.0/nsdb/EmblWriterPOA.java
artemis-4.0/nsdb/EmblWriterPOATie.java
artemis-4.0/nsdb/InvalidKey.java
artemis-4.0/nsdb/InvalidKeyHolder.java
artemis-4.0/nsdb/InvalidKeyHelper.java
artemis-4.0/nsdb/CommitFailed.java
artemis-4.0/nsdb/CommitFailedHolder.java
artemis-4.0/nsdb/CommitFailedHelper.java
artemis-4.0/nsdb/EmblSeqWriter.java
artemis-4.0/nsdb/EmblSeqWriterOperations.java
artemis-4.0/nsdb/EmblSeqWriterHelper.java
artemis-4.0/nsdb/EmblSeqWriterHolder.java
artemis-4.0/nsdb/_EmblSeqWriterStub.java
artemis-4.0/nsdb/EmblSeqWriterPOA.java
artemis-4.0/nsdb/EmblSeqWriterPOATie.java
artemis-4.0/nsdb/NucFeatureWriter.java
artemis-4.0/nsdb/NucFeatureWriterOperations.java
artemis-4.0/nsdb/Embl.class
artemis-4.0/nsdb/NucFeatureWriterHelper.java
artemis-4.0/nsdb/NucFeatureWriterHolder.java
artemis-4.0/nsdb/_NucFeatureWriterStub.java
artemis-4.0/nsdb/NucFeatureWriterPOA.java
artemis-4.0/nsdb/NucFeatureWriterPOATie.java
artemis-4.0/nsdb/EmblSeq.class
artemis-4.0/nsdb/EmblSeqOperations.class
artemis-4.0/nsdb/NucSeq.class
artemis-4.0/nsdb/EntryInfo.class
artemis-4.0/nsdb/NucSeqOperations.class
artemis-4.0/nsdb/EntryInfoOperations.class
artemis-4.0/nsdb/InexactLocation.class
artemis-4.0/nsdb/ServerInfo.class
artemis-4.0/nsdb/EntryStats.class
artemis-4.0/nsdb/EmblOperations.class
artemis-4.0/nsdb/EmblWriter.class
artemis-4.0/nsdb/EmblWriterOperations.class
artemis-4.0/nsdb/EmblWriterHelper.class
artemis-4.0/nsdb/NucFeature.class
artemis-4.0/nsdb/NucFeatureOperations.class
artemis-4.0/nsdb/EmblSeqWriter.class
artemis-4.0/nsdb/EmblSeqWriterOperations.class
artemis-4.0/nsdb/LocationParse.class
artemis-4.0/nsdb/InvalidKey.class
artemis-4.0/nsdb/ReadOnlyException.class
artemis-4.0/nsdb/CommitFailed.class
artemis-4.0/nsdb/NucFeatureWriter.class
artemis-4.0/nsdb/NucFeatureWriterOperations.class
artemis-4.0/nsdb/QualifierParse.class
artemis-4.0/nsdb/InvalidQualifier.class
artemis-4.0/nsdb/OutOfDate.class
artemis-4.0/nsdb/EmblHelper.class
artemis-4.0/nsdb/Location.class
artemis-4.0/nsdb/LocationOperations.class
artemis-4.0/nsdb/InexactLocationHelper.class
artemis-4.0/nsdb/_EmblWriterStub.class
artemis-4.0/nsdb/FeatureLocation.class
artemis-4.0/nsdb/FeatureLocationOperations.class
artemis-4.0/nsdb/Datestamp.class
artemis-4.0/nsdb/_EmblStub.class
artemis-4.0/nsdb/LocationParseHelper.class
artemis-4.0/nsdb/CommitFailedHelper.class
artemis-4.0/nsdb/EmblSeqWriterHelper.class
artemis-4.0/nsdb/NucFeatureWriterHelper.class
artemis-4.0/nsdb/QualifierParseHelper.class
artemis-4.0/nsdb/ServerInfoHelper.class
artemis-4.0/nsdb/EmblSeqHelper.class
artemis-4.0/nsdb/_EmblSeqWriterStub.class
artemis-4.0/nsdb/_NucFeatureWriterStub.class
artemis-4.0/nsdb/EntryStatsHelper.class
artemis-4.0/nsdb/_EmblSeqStub.class
artemis-4.0/nsdb/NucFeatureListHelper.class
artemis-4.0/nsdb/DatestampHelper.class
artemis-4.0/nsdb/NucFeatureHelper.class
artemis-4.0/nsdb/ReadOnlyExceptionHelper.class
artemis-4.0/nsdb/LocationHelper.class
artemis-4.0/nsdb/InvalidKeyHelper.class
artemis-4.0/nsdb/InvalidQualifierHelper.class
artemis-4.0/nsdb/OutOfDateHelper.class
artemis-4.0/nsdb/FeatureLocationHelper.class
artemis-4.0/nsdb/_NucFeatureStub.class
artemis-4.0/nsdb/_LocationStub.class
artemis-4.0/nsdb/_FeatureLocationStub.class
artemis-4.0/seqdb/BioSeq.java
artemis-4.0/seqdb/BioSeqOperations.java
artemis-4.0/seqdb/BioSeqHelper.java
artemis-4.0/seqdb/BioSeqHolder.java
artemis-4.0/seqdb/_BioSeqStub.java
artemis-4.0/seqdb/BioSeqPOA.java
artemis-4.0/seqdb/BioSeqPOATie.java
artemis-4.0/seqdb/Feature.java
artemis-4.0/seqdb/FeatureOperations.java
artemis-4.0/seqdb/FeatureHelper.java
artemis-4.0/seqdb/FeatureHolder.java
artemis-4.0/seqdb/_FeatureStub.java
artemis-4.0/seqdb/FeaturePOA.java
artemis-4.0/seqdb/FeaturePOATie.java
artemis-4.0/seqdb/SeqInfo.java
artemis-4.0/seqdb/SeqInfoOperations.java
artemis-4.0/seqdb/SeqInfoHelper.java
artemis-4.0/seqdb/SeqInfoPOA.java
artemis-4.0/seqdb/SeqInfoHolder.java
artemis-4.0/seqdb/_SeqInfoStub.java
artemis-4.0/seqdb/SeqInfoPOATie.java
artemis-4.0/seqdb/SeqInfo.class
artemis-4.0/seqdb/SeqInfoOperations.class
artemis-4.0/seqdb/BioSeqOperations.class
artemis-4.0/seqdb/BioSeq.class
artemis-4.0/seqdb/Feature.class
artemis-4.0/seqdb/FeatureOperations.class
artemis-4.0/Ensembl/artemis/RequestedSequenceTooLong.java
artemis-4.0/Ensembl/artemis/RequestedSequenceTooLongHolder.java
artemis-4.0/Ensembl/artemis/RequestedSequenceTooLongHelper.java
artemis-4.0/Ensembl/artemis/NoEntry.java
artemis-4.0/Ensembl/artemis/NoEntryHolder.java
artemis-4.0/Ensembl/artemis/NoEntryHelper.java
artemis-4.0/Ensembl/artemis/BioSequence.java
artemis-4.0/Ensembl/artemis/BioSequenceOperations.java
artemis-4.0/Ensembl/artemis/BioSequenceHelper.java
artemis-4.0/Ensembl/artemis/BioSequenceHolder.java
artemis-4.0/Ensembl/artemis/_BioSequenceStub.java
artemis-4.0/Ensembl/artemis/BioSequencePOA.java
artemis-4.0/Ensembl/artemis/BioSequencePOATie.java
artemis-4.0/Ensembl/artemis/Qualifier.java
artemis-4.0/Ensembl/artemis/QualifierHolder.java
artemis-4.0/Ensembl/artemis/QualifierHelper.java
artemis-4.0/Ensembl/artemis/QualifierListHolder.java
artemis-4.0/Ensembl/artemis/QualifierListHelper.java
artemis-4.0/Ensembl/artemis/Feature.java
artemis-4.0/Ensembl/artemis/FeatureOperations.java
artemis-4.0/Ensembl/artemis/FeatureHelper.java
artemis-4.0/Ensembl/artemis/FeatureHolder.java
artemis-4.0/Ensembl/artemis/_FeatureStub.java
artemis-4.0/Ensembl/artemis/FeaturePOA.java
artemis-4.0/Ensembl/artemis/DB.java
artemis-4.0/Ensembl/artemis/FeaturePOATie.java
artemis-4.0/Ensembl/artemis/FeatureListHolder.java
artemis-4.0/Ensembl/artemis/FeatureListHelper.java
artemis-4.0/Ensembl/artemis/Entry.java
artemis-4.0/Ensembl/artemis/EntryOperations.java
artemis-4.0/Ensembl/artemis/EntryHelper.java
artemis-4.0/Ensembl/artemis/EntryHolder.java
artemis-4.0/Ensembl/artemis/_EntryStub.java
artemis-4.0/Ensembl/artemis/EntryPOA.java
artemis-4.0/Ensembl/artemis/EntryPOATie.java
artemis-4.0/Ensembl/artemis/QualifierDefinitionListHolder.java
artemis-4.0/Ensembl/artemis/QualifierDefinitionListHelper.java
artemis-4.0/Ensembl/artemis/FeatureDefinition.java
artemis-4.0/Ensembl/artemis/FeatureDefinitionHolder.java
artemis-4.0/Ensembl/artemis/FeatureDefinitionHelper.java
artemis-4.0/Ensembl/artemis/FeatureDefinitionListHolder.java
artemis-4.0/Ensembl/artemis/FeatureDefinitionListHelper.java
artemis-4.0/Ensembl/artemis/EntryNameListHolder.java
artemis-4.0/Ensembl/artemis/EntryNameListHelper.java
artemis-4.0/Ensembl/artemis/DBOperations.java
artemis-4.0/Ensembl/artemis/DBHelper.java
artemis-4.0/Ensembl/artemis/DBHolder.java
artemis-4.0/Ensembl/artemis/_DBStub.java
artemis-4.0/Ensembl/artemis/DBPOA.java
artemis-4.0/Ensembl/artemis/DBPOATie.java
artemis-4.0/Diana.class
artemis-4.0/AppGlobal.class
bin/art
@dirrm artemis-4.0/META-INF/CVS
@dirrm artemis-4.0/META-INF
@dirrm artemis-4.0/collections/CVS
@dirrm artemis-4.0/collections
@dirrm artemis-4.0/corba/CVS
@dirrm artemis-4.0/corba
@dirrm artemis-4.0/diana/CVS
@dirrm artemis-4.0/diana/plot/CVS
@dirrm artemis-4.0/diana/plot
@dirrm artemis-4.0/diana/components/CVS
@dirrm artemis-4.0/diana/components
@dirrm artemis-4.0/diana/sequence/CVS
@dirrm artemis-4.0/diana/sequence
@dirrm artemis-4.0/diana
@dirrm artemis-4.0/docs/CVS
@dirrm artemis-4.0/docs
@dirrm artemis-4.0/embl/CVS
@dirrm artemis-4.0/embl
@dirrm artemis-4.0/etc/CVS
@dirrm artemis-4.0/etc
@dirrm artemis-4.0/lib/CVS
@dirrm artemis-4.0/lib
@dirrm artemis-4.0/uk/CVS
@dirrm artemis-4.0/uk/ac/sanger/CVS
@dirrm artemis-4.0/uk/ac/sanger/pathogens/CVS
@dirrm artemis-4.0/uk/ac/sanger/pathogens/embl/CVS
@dirrm artemis-4.0/uk/ac/sanger/pathogens/embl
@dirrm artemis-4.0/uk/ac/sanger/pathogens
@dirrm artemis-4.0/uk/ac/CVS
@dirrm artemis-4.0/uk/ac/sanger
@dirrm artemis-4.0/uk/ac
@dirrm artemis-4.0/uk
@dirrm artemis-4.0/type
@dirrm artemis-4.0/nsdb/LocationPackage
@dirrm artemis-4.0/nsdb/NucFeaturePackage
@dirrm artemis-4.0/nsdb/EmblPackage
@dirrm artemis-4.0/nsdb
@dirrm artemis-4.0/seqdb
@dirrm artemis-4.0/Ensembl/artemis
@dirrm artemis-4.0/Ensembl
@dirrm artemis-4.0/CVS
@dirrm artemis-4.0