..
artemis
Initial import of artemis 4.0
2001-12-22 14:39:40 +00:00
avida
add avida 1.6.0
2002-04-20 15:17:46 +00:00
babel
* Replace pkg-message about setting BABEL_DIR with a wrapper script
2001-12-02 13:09:47 +00:00
biojava
Unbreak this port:
2002-06-16 01:08:49 +00:00
chemeq
upgrade to V110-1
2002-04-21 13:33:29 +00:00
clustalw
- Add a new patch
2002-03-27 14:01:57 +00:00
coalesce
Add coalesce 1.50, a program to fit population models.
2001-08-06 14:41:58 +00:00
crimap
Add crimap 2.4, a tool for the creation of multilocus linkage maps.
2002-03-27 14:42:56 +00:00
deft
change master site
2002-03-29 08:15:13 +00:00
dna-qc
Add dna-qc 1993.07.26, a quality control algorithm for DNA
2001-12-19 03:20:48 +00:00
emboss
- Update to version 2.4.1
2002-07-05 10:09:32 +00:00
fasta
Replace erroneous usage of INSTALL_MAN with INSTALL_DATA.
2001-07-03 09:08:26 +00:00
fasta3
Prefer <limits.h> over <values.h> as the latter has been removed from
2002-08-23 03:36:33 +00:00
fastdnaml
Add NOPORTDOCS support to pkg-plist
2001-07-08 18:15:34 +00:00
fluctuate
Add fluctuate 1.30, a program to fit population models.
2001-08-06 14:45:39 +00:00
gaussian98
Style police: WWW tags should either end in a file/script or TRAILING /; Fix the later case
2001-11-20 23:29:38 +00:00
genpak
Bump png major
2001-09-11 03:32:41 +00:00
gff2ps
- Install documentation
2002-02-13 02:54:31 +00:00
gperiodic
Pass maintainership to submitter and add a backup master site.
2002-02-20 06:53:44 +00:00
grappa
- Update to version 1.0.3
2001-08-29 11:53:29 +00:00
hmmer
- Add patch that will, for -CURRENT only, change: -pthread -> -lc_r
2002-07-11 10:52:14 +00:00
kinemage
Update to version 5.79.
2000-12-11 03:10:04 +00:00
L-Breeder
New port L-Breeder version 1.0: Allows you to display and breed
2002-08-21 00:01:59 +00:00
lamarc
Add lamarc 2001.08.06,
2001-08-07 08:17:58 +00:00
libgenome
- Support CXXFLAGS properly.
2002-08-17 19:16:55 +00:00
migrate
- Update to version 1.2.4
2001-08-22 14:43:45 +00:00
molden
Note distribution term.
2002-05-27 06:25:53 +00:00
mopac
Add NOPORTDOCS support to pkg-plist
2001-07-08 18:15:34 +00:00
nab
upgrade to 4.4
2002-07-16 06:18:16 +00:00
ncbi-toolkit
Correct MASTER_SITES.
2002-06-08 00:40:10 +00:00
nclever
Add nclever 4.0, a character-based version of NCBI's Entrez program.
2001-09-26 09:22:02 +00:00
ortep3
File missing in pkg-plist
2000-10-30 15:36:57 +00:00
p5-AcePerl
- Update to version 1.82
2002-01-25 12:35:20 +00:00
p5-bioperl
- Update to version 0.7.2, somewhat overdue. :-)
2002-01-25 11:46:09 +00:00
p5-bioperl-devel
- Add NO_LATEST_LINK, which should've been there in the first place. :-(
2001-09-20 15:11:14 +00:00
paml
- Update to version 3.1
2001-08-29 12:00:08 +00:00
phylip
Update to version 3.6.a3.
2002-08-13 16:07:45 +00:00
pkg
platon
add USE_XLIB
2001-07-30 21:05:54 +00:00
povchem
Clean up inefficient perl invocations; use multiple REs in the same call.
2001-01-07 17:49:52 +00:00
psi88
update WWW and master site
2001-10-22 06:36:14 +00:00
py-biopython
Use $PYNUMERIC in the dependencies.
2002-07-15 11:37:35 +00:00
pymol
o Fix RUN_DEPENDS path (PMW -> Pmw)
2002-08-25 08:37:53 +00:00
rasmol
Fix WWW.
2002-03-08 20:50:08 +00:00
recombine
Add recombine 1.40, a program to fit population models across sites.
2001-08-06 14:49:53 +00:00
ruby-bio
Update to 0.3.9.
2002-08-03 07:02:10 +00:00
seaview
Bump XForms lib. version.
2002-07-04 09:20:30 +00:00
seqio
Remove a redundant trailing space.
2001-10-21 07:55:45 +00:00
sim4
Update to sim4-2002.03.03 to unbreak build.
2002-05-04 21:45:10 +00:00
spdbv
Swiss-PdbViewer is an application that provides a user friendly interface
2002-04-02 16:18:53 +00:00
t_coffee
Add t_coffee 1.37, a multiple DNA or protein sequence alignment package.
2002-01-25 14:58:16 +00:00
tinker
Upgrade tinker to the latest revision
2002-01-19 15:15:16 +00:00
treeviewx
Respect CFLAGS/CC.
2002-03-28 22:50:15 +00:00
tRNAscan-SE
Add tRNAscan-SE 1.21, an improved tool for transfer RNA detection.
2002-03-27 14:18:49 +00:00
xdrawchem
Use ${ECHO_CMD} instead of ${ECHO} where you mean the echo command;
2002-01-29 09:39:59 +00:00
xmolwt
o update to 0.7.
2002-01-23 19:52:38 +00:00
Makefile
New port L-Breeder version 1.0: Allows you to display and breed
2002-08-21 00:01:59 +00:00
485faf1e84