37526bbd4e
A big Thank You to the original contributors of these ports: * Aaron Dalton <aaron@FreeBSD.org> * Akinori MUSHA aka knu <knu@idaemons.org> * Andrey Zakhvatov * Bob Zimmermann <rpz@cse.wustl.edu> * Camson Huynh <chuynh@biolateral.com.au> * Dan Siercks <dsiercks@uwm.edu> * Fernan Aguero <fernan@iib.unsam.edu.ar> * Hannes Hauswedell <h2+fbsdports@fsfe.org> * J. Bacon <jwb@FreeBSD.org> * Jason Bacon <jwb@FreeBSD.org> * Jeremy <karlj000@unbc.ca> * Johann Visagie <johann@egenetics.com> * Johann Visagie <wjv@FreeBSD.org> * Mauricio Herrera Cuadra <mauricio@arareko.net> * Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp> * Motomichi Matsuzaki <mzaki@e-mail.ne.jp> * Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp> * Motomichi Matsuzaki <mzaki@niid.go.jp> * Po-Chuan Hsieh <sunpoet@FreeBSD.org> * Razi Khaja <razi@genet.sickkids.on.ca> * Reed A. Cartwright <cartwright@asu.edu> * Ryo MIYAMOTO * Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp> * Sangwoo Shim <sangwoos@gmail.com> * Sunpoet Po-Chuan Hsieh <sunpoet@FreeBSD.org> * Tassilo Philipp <tphilipp@potion-studios.com> * Tony Maher * Tony Maher <tonym@biolateral.com.au> * Wen Heping <wen@FreeBSD.org> * Wen Heping <wenheping@gmail.com> * Yonatan <onatan@gmail.com> * Yuri Victorovich <yuri@rawbw.com> * ballen * barnhart@genetics.wustl.edu * camson@bilateral.com.au * chuynh@biolateral.com.au * dbader@eece.unm.edu * frankch@waru.life.nthu.edu.tw * h2 * lentferj * maho@FreeBSD.org * mzaki@biol.s.u-tokyo.ac.jp * tonym * wen@FreeBSD.org With hat: portmgr
30 lines
778 B
Makefile
30 lines
778 B
Makefile
PORTNAME= gmap
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PORTVERSION= 2020.09.12
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CATEGORIES= biology
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MASTER_SITES= http://research-pub.gene.com/gmap/src/
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DISTNAME= ${PORTNAME}-gsnap-${PORTVERSION:C|\.|-|g}
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MAINTAINER= jwb@FreeBSD.org
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COMMENT= Genomic Mapping and Alignment Program for mRNA and EST Sequences
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LICENSE= GMAP
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LICENSE_NAME= GMAP License
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LICENSE_FILE= ${WRKSRC}/COPYING
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LICENSE_PERMS= dist-mirror pkg-mirror auto-accept
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ONLY_FOR_ARCHS= amd64 i386 powerpc64le
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ONLY_FOR_ARCHS_REASON= upstream supports only x86 and possibly POWER8
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USES= gmake perl5
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GNU_CONFIGURE= yes
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CONFLICTS_INSTALL= cpuid scotch # bin/cpuid bin/gmap
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WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION:C|\.|-|g}
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CFLAGS+= -fcommon
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OPTIONS_DEFINE= SIMD
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SIMD_CONFIGURE_OFF= --disable-builtin-popcount --disable-simd
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.include <bsd.port.mk>
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