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freebsd-ports/biology/Makefile
Rene Ladan 5980fd40bc Remove expired ports: 
2021-04-01 ftp/wzdftpd: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 astro/roadmap: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 games/cosmo: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 games/bomberinstinct: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 games/drm: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 games/bygfoot: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 games/cre: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 irc/hybserv: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 irc/xaric: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 mail/elmo: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 misc/cave: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 security/bugs: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 security/dmitry: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 security/doorman: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 shells/esh: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 sysutils/cpu: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 textproc/libcrm114: No known users, dead upstream
2021-04-01 x11/wmmatrix: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 x11/wmxss: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 x11/tycoon: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 x11/xgrab: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 x11/xbanner: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 x11/bricons: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 x11/xmon: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 games/cavezofphear: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 astro/saoimage: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 audio/ksmp3play: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 audio/jamin: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 audio/musicbox-tag-editor: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 audio/nspmod: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 audio/cdplay: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 audio/gimmix: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 audio/ghostess: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 audio/wmrecord: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 audio/toolame: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 audio/shout: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 biology/grappa: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 biology/phylip: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 biology/lagan: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 cad/varkon: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 cad/transcalc: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 comms/seyon: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 comms/efax: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 converters/vda2fbd: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 converters/shftool: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 devel/openzz: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 devel/sourcenav: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 devel/gb: Unmaintained and dead upstream
2021-04-01 dns/checkdns: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 dns/inadyn-mt: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 editors/gate: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 editors/thoteditor: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 emulators/cinc: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 emulators/e-uae: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 emulators/dtcyber: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 ftp/jftpgw: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-01 ftp/pureadmin: Unmaintained and dead upstream, does not build with -fno-common (llvm 11)
2021-04-02 textproc/hs-pandoc-citeproc: Integrated into textproc/hs-pandoc
2021-04-07 19:54:26 +02:00

187 lines
4.3 KiB
Makefile
Raw Blame History

COMMENT = Biology
SUBDIR += abyss
SUBDIR += ad2vcf
SUBDIR += artemis
SUBDIR += avida
SUBDIR += babel
SUBDIR += bamtools
SUBDIR += bcftools
SUBDIR += bedtools
SUBDIR += bioawk
SUBDIR += biococoa
SUBDIR += biolibc
SUBDIR += bioparser
SUBDIR += biosoup
SUBDIR += bolt-lmm
SUBDIR += bowtie
SUBDIR += bowtie2
SUBDIR += bwa
SUBDIR += canu
SUBDIR += cd-hit
SUBDIR += cdbfasta
SUBDIR += checkm
SUBDIR += clustal-omega
SUBDIR += clustalw
SUBDIR += cufflinks
SUBDIR += cytoscape
SUBDIR += ddocent
SUBDIR += diamond
SUBDIR += dsr-pdb
SUBDIR += edlib
SUBDIR += emboss
SUBDIR += exonerate
SUBDIR += fasta
SUBDIR += fasta3
SUBDIR += fastahack
SUBDIR += fastdnaml
SUBDIR += fastool
SUBDIR += fastp
SUBDIR += fastqc
SUBDIR += fasttree
SUBDIR += fastx-toolkit
SUBDIR += figtree
SUBDIR += fluctuate
SUBDIR += freebayes
SUBDIR += garlic
SUBDIR += gatk
SUBDIR += gcta
SUBDIR += gemma
SUBDIR += generand
SUBDIR += gff2ps
SUBDIR += gmap
SUBDIR += gperiodic
SUBDIR += graphlan
SUBDIR += groopm
SUBDIR += haplohseq
SUBDIR += hhsuite
SUBDIR += hisat2
SUBDIR += hmmer
SUBDIR += htslib
SUBDIR += hyphy
SUBDIR += igv
SUBDIR += infernal
SUBDIR += iolib
SUBDIR += iqtree
SUBDIR += jalview
SUBDIR += jellyfish
SUBDIR += kallisto
SUBDIR += lamarc
SUBDIR += libbigwig
SUBDIR += libgtextutils
SUBDIR += libsbml
SUBDIR += linux-foldingathome
SUBDIR += mafft
SUBDIR += mapm3
SUBDIR += migrate
SUBDIR += minimap2
SUBDIR += molden
SUBDIR += mopac
SUBDIR += mothur
SUBDIR += mrbayes
SUBDIR += mummer
SUBDIR += muscle
SUBDIR += ncbi-blast+
SUBDIR += ncbi-cxx-toolkit
SUBDIR += ncbi-toolkit
SUBDIR += ngs-sdk
SUBDIR += p5-AcePerl
SUBDIR += p5-Bio-ASN1-EntrezGene
SUBDIR += p5-Bio-Cluster
SUBDIR += p5-Bio-Coordinate
SUBDIR += p5-Bio-DB-EMBL
SUBDIR += p5-Bio-DB-NCBIHelper
SUBDIR += p5-Bio-Das
SUBDIR += p5-Bio-Das-Lite
SUBDIR += p5-Bio-FeatureIO
SUBDIR += p5-Bio-GFF3
SUBDIR += p5-Bio-Glite
SUBDIR += p5-Bio-Graphics
SUBDIR += p5-Bio-MAGETAB
SUBDIR += p5-Bio-NEXUS
SUBDIR += p5-Bio-Phylo
SUBDIR += p5-Bio-SCF
SUBDIR += p5-Bio-Variation
SUBDIR += p5-BioPerl
SUBDIR += p5-BioPerl-Run
SUBDIR += p5-TrimGalore
SUBDIR += p5-transdecoder
SUBDIR += paml
SUBDIR += pbbam
SUBDIR += pbseqan
SUBDIR += pear-merger
SUBDIR += phrap
SUBDIR += phred
SUBDIR += phyml
SUBDIR += picard-tools
SUBDIR += plink
SUBDIR += pooler
SUBDIR += primer3
SUBDIR += prodigal
SUBDIR += prodigy-lig
SUBDIR += protomol
SUBDIR += psi88
SUBDIR += py-Genesis-PyAPI
SUBDIR += py-biom-format
SUBDIR += py-biopython
SUBDIR += py-bx-python
SUBDIR += py-cutadapt
SUBDIR += py-dnaio
SUBDIR += py-ete3
SUBDIR += py-gffutils
SUBDIR += py-gtfparse
SUBDIR += py-hits
SUBDIR += py-loompy
SUBDIR += py-macs2
SUBDIR += py-multiqc
SUBDIR += py-orange3-bioinformatics
SUBDIR += py-orange3-single-cell
SUBDIR += py-pandas-charm
SUBDIR += py-pyfaidx
SUBDIR += py-pysam
SUBDIR += py-scikit-bio
SUBDIR += py-xenaPython
SUBDIR += pyfasta
SUBDIR += python-nexus
SUBDIR += rainbow
SUBDIR += rampler
SUBDIR += recombine
SUBDIR += ruby-bio
SUBDIR += rubygem-bio
SUBDIR += rubygem-bio-executables
SUBDIR += rubygem-bio-old-biofetch-emulator
SUBDIR += rubygem-bio-shell
SUBDIR += samtools
SUBDIR += scrm
SUBDIR += seaview
SUBDIR += seqan
SUBDIR += seqan-apps
SUBDIR += seqan1
SUBDIR += seqio
SUBDIR += seqtk
SUBDIR += sim4
SUBDIR += slclust
SUBDIR += smithwaterman
SUBDIR += spoa
SUBDIR += stacks
SUBDIR += star
SUBDIR += stringtie
SUBDIR += subread
SUBDIR += tRNAscan-SE
SUBDIR += tabixpp
SUBDIR += treekin
SUBDIR += treepuzzle
SUBDIR += trimadap
SUBDIR += trimmomatic
SUBDIR += ugene
SUBDIR += vcf-split
SUBDIR += vcf2hap
SUBDIR += vcflib
SUBDIR += vcftools
SUBDIR += velvet
SUBDIR += viennarna
SUBDIR += vsearch
SUBDIR += vt
SUBDIR += wise
.include <bsd.port.subdir.mk>
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