freebsd-ports/biology/gmap/Makefile
Stefan Eßer bdd2d4af96 Update CONFLICTS definitions in categories a* to c*
Update the CONFLICTS definitions of ports in the following categories:

- accessibility
- archivers
- audio
- benchmarks
- biology
- cad
- chinese
- comms
- converters

An attempt has been made to use generic conflicts patterns that do not
have to be updated whenever a new version of a conflicting port is
added to the ports system.

There is a misunderstanding that the port being built/installed has to
be omitted from the conflicts pattern. This is not true - the port
being built is implicitly non-conflicting due to logic in bsd.port.mk.

Approved by:	portmgr (implicit)
2022-02-06 19:36:07 +01:00

32 lines
828 B
Makefile

# Created by: Bob Zimmermann <rpz@cse.wustl.edu>
PORTNAME= gmap
PORTVERSION= 2020.09.12
CATEGORIES= biology
MASTER_SITES= http://research-pub.gene.com/gmap/src/
DISTNAME= ${PORTNAME}-gsnap-${PORTVERSION:C|\.|-|g}
MAINTAINER= jwb@FreeBSD.org
COMMENT= Genomic Mapping and Alignment Program for mRNA and EST Sequences
LICENSE= GMAP
LICENSE_NAME= GMAP License
LICENSE_FILE= ${WRKSRC}/COPYING
LICENSE_PERMS= dist-mirror pkg-mirror auto-accept
ONLY_FOR_ARCHS= amd64 i386 powerpc64le
ONLY_FOR_ARCHS_REASON= upstream supports only x86 and possibly POWER8
USES= gmake perl5
GNU_CONFIGURE= yes
CONFLICTS_INSTALL= cpuid scotch # bin/cpuid bin/gmap
WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION:C|\.|-|g}
CFLAGS+= -fcommon
OPTIONS_DEFINE= SIMD
SIMD_CONFIGURE_OFF= --disable-builtin-popcount --disable-simd
.include <bsd.port.mk>