87adcecff0
- fix linker flags - USE_LDCONFIG - respect NOPORTEXAMPLES - bump PORTREVISION PR: ports/130812 Submitted by: bf <bf2006a@yahoo.com> (maintainer)
422 lines
20 KiB
Text
422 lines
20 KiB
Text
bin/jags
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include/JAGS/Console.h
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include/JAGS/JRmath.h
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include/JAGS/Module.h
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include/JAGS/compiler/Compiler.h
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include/JAGS/compiler/ConstantFactory.h
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include/JAGS/compiler/Counter.h
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include/JAGS/compiler/CounterTab.h
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include/JAGS/compiler/LogicalFactory.h
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include/JAGS/compiler/MixtureFactory.h
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include/JAGS/compiler/NodeFactory.h
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include/JAGS/compiler/ParseTree.h
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include/JAGS/distribution/DistScalar.h
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include/JAGS/distribution/DistScalarRmath.h
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include/JAGS/distribution/DistTab.h
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include/JAGS/distribution/Distribution.h
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include/JAGS/distribution/RNG.h
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include/JAGS/distribution/RNGFactory.h
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include/JAGS/distribution/RmathRNG.h
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include/JAGS/function/FuncTab.h
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include/JAGS/function/Function.h
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include/JAGS/function/InverseLinkFunc.h
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include/JAGS/function/ScalarFunc.h
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include/JAGS/graph/AggNode.h
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include/JAGS/graph/ConstantNode.h
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include/JAGS/graph/DeterministicNode.h
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include/JAGS/graph/DevianceNode.h
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include/JAGS/graph/Graph.h
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include/JAGS/graph/GraphMarks.h
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include/JAGS/graph/LogicalNode.h
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include/JAGS/graph/MixtureNode.h
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include/JAGS/graph/Node.h
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include/JAGS/graph/NodeError.h
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include/JAGS/graph/StochasticNode.h
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include/JAGS/model/BUGSModel.h
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include/JAGS/model/Model.h
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include/JAGS/model/Monitor.h
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include/JAGS/model/MonitorFactory.h
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include/JAGS/model/NodeArray.h
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include/JAGS/model/SymTab.h
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include/JAGS/sampler/DensityMethod.h
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include/JAGS/sampler/DensitySampler.h
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include/JAGS/sampler/Linear.h
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include/JAGS/sampler/Metropolis.h
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include/JAGS/sampler/RWMetropolis.h
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include/JAGS/sampler/Sampler.h
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include/JAGS/sampler/SamplerFactory.h
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include/JAGS/sampler/SingletonFactory.h
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include/JAGS/sampler/Slicer.h
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include/JAGS/sarray/Range.h
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include/JAGS/sarray/RangeIterator.h
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include/JAGS/sarray/SArray.h
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include/JAGS/util/dim.h
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include/JAGS/util/integer.h
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include/JAGS/util/logical.h
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include/JAGS/util/nainf.h
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lib/JAGS/modules/basemod.la
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lib/JAGS/modules/basemod.so
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lib/JAGS/modules/bugs.la
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lib/JAGS/modules/bugs.so
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lib/JAGS/modules/dic.la
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lib/JAGS/modules/dic.so
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lib/JAGS/modules/mix.la
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lib/JAGS/modules/mix.so
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lib/JAGS/modules/msm.la
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lib/JAGS/modules/msm.so
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lib/libjags.la
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lib/libjags.so
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lib/libjags.so.1
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lib/libjrmath.la
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lib/libjrmath.so
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lib/libjrmath.so.0
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libdata/pkgconfig/jags.pc
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libexec/jags-terminal
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%%PORTDOCS%%%%DOCSDIR%%/jags_user_manual.pdf
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/R/Rcheck.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/R/bench.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/R/check.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/ReadMe
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/Makefile
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/blocker/ReadMe
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/blocker/bench-test1.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/epil/bench-test1.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/epil/epil-inits.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/epil/make-BT.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/equiv/test1.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/inhaler/inhaler-data.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/inhaler/test1.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/kidney/ReadMe
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/kidney/bench-test1.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol1/leuk/bench-test1.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/bench-test2.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/bench-test3.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/bench-test4.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/birats-data.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/birats-inits.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/birats1.bug
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/birats2.bug
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/birats3.bug
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/birats4.bug
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/test1.cmd
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/test2.cmd
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/test3.cmd
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/birats/test4.cmd
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/cervix/ReadMe
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/cervix/cervix-data.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/cervix/cervix-inits.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/cervix/cervix.bug
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/cervix/test1.cmd
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/dugongs/bench-test1.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/dugongs/dugongs-data.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/dugongs/dugongs-inits.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/dugongs/dugongs.bug
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/dugongs/test1.cmd
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/eyes/ReadMe
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/eyes/bench-test2.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/eyes/eyes-data.R
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/eyes/eyes-inits.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/eyes/eyes.bug
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/eyes/eyes.dat
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/eyes/eyes2.bug
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/eyes/notest1.cmd
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/eyes/test2.cmd
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/hearts/bench-test1.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/hearts/hearts-data.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/hearts/hearts-inits.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/hearts/hearts.bug
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/hearts/hearts.dat
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/hearts/test1.cmd
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/ice/ReadMe
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/ice/bench-test1.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/ice/bench.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/ice/ice-data.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/ice/ice-inits.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/ice/icear.bug
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/ice/test1.cmd
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/ReadMe
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/bench-test1.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/bench-test2.R
|
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%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/bench-test3.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/jaw-constant.bug
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/jaw-data.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/jaw-inits.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/jaw-linear.bug
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/jaw-quadratic.bug
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/test1.cmd
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/test2.cmd
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/jaw/test3.cmd
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/bench-test1.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/bench-test2.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/mvotree-data.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/mvotree-inits.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/mvotree.bug
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/orange-data.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/orange-inits.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/otree.bug
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/otree.dat
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/otree.in
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/test1.cmd
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/orange/test2.cmd
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/pigs/bench-test1.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/pigs/pigs-data.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/pigs/pigs-inits.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/pigs/pigs.bug
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/pigs/test1.cmd
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/bench-test1.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/schools-data.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/schools-inits.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/schools.bug
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/schools.dat
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/test.bug
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/schools/test1.cmd
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/ReadMe
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/bench-test3.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/bench-test4.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/notest1.cmd
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/notest2.cmd
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-data.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-inits1.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-inits2.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-inits3.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant-inits4.R
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant.bug
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/stagnant2.bug
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/test3.cmd
|
|
%%PORTEXAMPLES%%%%EXAMPLESDIR%%/vol2/stagnant/test4.cmd
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/stagnant
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/schools
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/pigs
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/orange
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/jaw
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/ice
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/hearts
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/eyes
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/dugongs
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/cervix
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/birats
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/biops
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/beetles
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/asia
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/alli
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2/air
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol2
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/seeds
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/salm
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/rats
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/pump
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/oxford
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/mice
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/lsat
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/litters
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/line
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/leuk
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/kidney
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/inhaler
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/equiv
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/epil
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/dyes
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/bones
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1/blocker
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/vol1
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/R
|
|
%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%
|
|
%%PORTDOCS%%@dirrm %%DOCSDIR%%
|
|
@dirrm lib/JAGS/modules
|
|
@dirrm lib/JAGS
|
|
@dirrm include/JAGS/util
|
|
@dirrm include/JAGS/sarray
|
|
@dirrm include/JAGS/sampler
|
|
@dirrm include/JAGS/model
|
|
@dirrm include/JAGS/graph
|
|
@dirrm include/JAGS/function
|
|
@dirrm include/JAGS/distribution
|
|
@dirrm include/JAGS/compiler
|
|
@dirrm include/JAGS
|