fb16dfecae
Commit b7f05445c0 has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner)
6 lines
476 B
Text
6 lines
476 B
Text
SIMD-vectorized implementation of the Viterbi algorithm for profile HMM
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alignment and introduced various other speed-ups. This accelerated HHsearch by a
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factor 4 and HHblits by a factor 2 over the previous version 2.0.16. HHblits3 is
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~10x faster than PSI-BLAST and ~20x faster than HMMER3. Jobs to perform HHsearch
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and HHblits searches with many query profile HMMs can be parallelized over cores
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and over servers in a cluster using OpenMP and message passing interface (MPI).
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