62 lines
1.7 KiB
Makefile
62 lines
1.7 KiB
Makefile
# Created by: Fernan Aguero <fernan@iib.unsam.edu.ar>
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# $FreeBSD$
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PORTNAME= blat
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PORTVERSION= 36
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CATEGORIES= biology
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MASTER_SITES= http://hgwdev.cse.ucsc.edu/~kent/src/ \
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https://users.soe.ucsc.edu/~kent/src/
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DISTNAME= ${PORTNAME}Src${PORTVERSION}
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MAINTAINER= ports@FreeBSD.org
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COMMENT= Fast tool for local sequence similarity searches
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LICENSE= NONE
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LIB_DEPENDS= libpng.so:graphics/png
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WRKSRC= ${WRKDIR}/${PORTNAME}Src
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USES= gmake mysql ssl zip
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MAKEFILE= makefile
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MAKE_ENV= MACHTYPE="${ARCH}" STRIP="${TRUE}"
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MAKE_ARGS= HOME="${WRKSRC}/${BINDIR}"
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CFLAGS+= -I${OPENSSLINC}
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CPPFLAGS+= -I${OPENSSLINC} $$(libpng-config --cflags)
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LDFLAGS+= -L${OPENSSLLIB} $$(libpng-config --ldflags) \
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-L${LOCALBASE}/lib/mysql
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SUB_FILES= pkg-message
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PLIST_FILES= ${EXECUTABLES:S,^,bin/,} \
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lib/blat/webBlat/webBlat \
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lib/blat/webBlat/install.txt
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EXECUTABLES= blat faToNib faToTwoBit gfClient gfServer nibFrag \
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pslPretty pslReps pslSort twoBitInfo twoBitToFa
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OPTIONS_DEFINE= DOCS
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post-patch:
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@${MKDIR} ${WRKSRC}/bin/${ARCH}
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@${MKDIR} ${WRKSRC}/lib/${ARCH}
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@${FIND} ${WRKSRC} -name "makefile" | ${XARGS} ${REINPLACE_CMD} -e \
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's|$${DESTDIR}||g'
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@${REINPLACE_CMD} -e \
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's|cd |$$(MAKE) -C | ; \
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s| &&.*||' ${WRKSRC}/makefile
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@${REINPLACE_CMD} -e \
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's|^CC=|CC?=| ; \
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s|^COPT=.*|COPT=$${CPPFLAGS}| ; \
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s|^L=.*|L=$${LDFLAGS}|' ${WRKSRC}/inc/common.mk
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do-install:
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.for exe in ${EXECUTABLES}
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${INSTALL_PROGRAM} ${WRKSRC}/bin/${ARCH}/${exe} ${STAGEDIR}${PREFIX}/bin
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.endfor
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@${MKDIR} ${STAGEDIR}${PREFIX}/lib/blat/webBlat
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${INSTALL_PROGRAM} ${WRKSRC}/webBlat/webBlat ${STAGEDIR}${PREFIX}/lib/blat/webBlat
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${INSTALL_DATA} ${WRKSRC}/webBlat/install.txt ${STAGEDIR}${PREFIX}/lib/blat/webBlat
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.include <bsd.port.mk>
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