| .. |
|
ariadne
|
Convert a bunch of EXTRACT_SUFX=... into USES=tar:...
|
2014-07-29 19:11:51 +00:00 |
|
artemis
|
Support stage
|
2014-01-20 23:06:48 +00:00 |
|
avida
|
|
|
|
babel
|
Rename biology/ patch-xy patches to reflect the files they modify.
|
2014-07-28 14:22:16 +00:00 |
|
biococoa
|
|
|
|
biojava
|
- add stage support
|
2014-06-01 10:37:22 +00:00 |
|
blast
|
Mark as broken: no distinfo provided
|
2014-06-22 22:06:01 +00:00 |
|
blat
|
Put HOME in MAKE_ARGS to handle pverride of HOME in MAKE_ENV from bsd.port.mk
|
2014-06-25 08:55:55 +00:00 |
|
boinc-simap
|
Drop maintainership BOINC ports, old machine running them gave up.
|
2014-02-04 17:54:29 +00:00 |
|
chemeq
|
Stage support
|
2014-01-18 15:55:42 +00:00 |
|
clustalw
|
Multiple ports: reset maintainers
|
2014-05-26 02:33:38 +00:00 |
|
consed
|
Convert a bunch of EXTRACT_SUFX=... into USES=tar:...
|
2014-07-29 19:11:51 +00:00 |
|
crux
|
Convert a bunch of USE_BZIP2 to USES=tar:bzip2
|
2014-07-29 18:41:15 +00:00 |
|
embassy
|
Reset maintainership for ports not staged with no pending PR
|
2014-07-23 16:44:27 +00:00 |
|
emboss
|
Remove indefinite articles and trailing periods from COMMENT, plus
|
2014-06-09 11:21:52 +00:00 |
|
fasta
|
- Add staging support
|
2014-03-24 09:01:39 +00:00 |
|
fasta3
|
biology/fasta3: Checked new distfile and regenerated distinfo to unbreak
|
2014-03-02 10:58:50 +00:00 |
|
fastdnaml
|
Support staging
|
2014-02-16 11:32:43 +00:00 |
|
fluctuate
|
Support staging
|
2014-02-16 11:35:00 +00:00 |
|
garlic
|
biology/garlic: Stage properly to unbreak
|
2014-07-17 10:13:06 +00:00 |
|
gff2ps
|
Add staging support
|
2014-03-23 17:43:41 +00:00 |
|
gmap
|
|
|
|
gperiodic
|
Add staging support
|
2014-03-23 18:09:23 +00:00 |
|
grappa
|
- Respect CC/CFLAGS
|
2013-12-20 13:27:13 +00:00 |
|
hmmer
|
Add DOCS to OPTIONS_DEFINE to ports that check for PORT_OPTIONS:MDOCS.
|
2014-07-15 14:54:54 +00:00 |
|
iolib
|
- I forgot to svn add a new patch
|
2014-05-31 18:03:08 +00:00 |
|
jalview
|
Fix properties on pkg-plist
|
2014-01-21 23:18:05 +00:00 |
|
lagan
|
|
|
|
lamarc
|
- rename AL2 to APACHE20 in Mk/bsd.licenses.db.mk
|
2013-12-30 20:55:18 +00:00 |
|
libsbml
|
- Update to 5.10.0
|
2014-05-13 07:04:17 +00:00 |
|
linux-foldingathome
|
Stagify.
|
2014-07-06 16:05:34 +00:00 |
|
mafft
|
Convert a bunch of EXTRACT_SUFX=... into USES=tar:...
|
2014-07-29 19:11:51 +00:00 |
|
mapm3
|
- Fix build with clang
|
2014-01-12 19:07:28 +00:00 |
|
migrate
|
- Stagify; cleanup Makefile and reorder the knobs a bit
|
2014-01-29 12:08:29 +00:00 |
|
molden
|
Catch a couple of missing convertsion to :tu/:tl
|
2014-05-05 11:15:53 +00:00 |
|
mopac
|
- Add staging support
|
2014-03-23 18:10:41 +00:00 |
|
mrbayes
|
Support stage
|
2013-12-10 17:54:12 +00:00 |
|
mummer
|
biology/mummer: Use OPSYS with OSVERSION
|
2014-07-19 22:00:16 +00:00 |
|
muscle
|
Update to 3.8.31.
|
2014-06-17 21:36:06 +00:00 |
|
ncbi-toolkit
|
Add staging support
|
2014-03-23 20:50:54 +00:00 |
|
njplot
|
- add stage support
|
2014-06-01 11:26:39 +00:00 |
|
ortep3
|
Update the default version of GCC used in the Ports Collection from
|
2014-03-10 20:55:20 +00:00 |
|
p5-AcePerl
|
Rename biology/ patch-xy patches to reflect the files they modify.
|
2014-07-28 14:22:16 +00:00 |
|
p5-Bio-ASN1-EntrezGene
|
Convert a bunch of EXTRACT_SUFX=... into USES=tar:...
|
2014-07-29 19:11:51 +00:00 |
|
p5-Bio-Das
|
- support stage
|
2014-01-05 12:07:20 +00:00 |
|
p5-Bio-Das-Lite
|
- fix pkg-plist
|
2014-01-30 07:34:25 +00:00 |
|
p5-Bio-GFF3
|
- Fix PLIST
|
2014-03-26 14:23:09 +00:00 |
|
p5-Bio-Glite
|
- support stage
|
2014-01-05 12:07:20 +00:00 |
|
p5-Bio-Graphics
|
Really fix.
|
2014-07-25 23:08:58 +00:00 |
|
p5-Bio-MAGETAB
|
- update to 1.31
|
2014-05-16 13:33:02 +00:00 |
|
p5-Bio-NEXUS
|
- Stage support
|
2014-01-31 12:47:06 +00:00 |
|
p5-Bio-Phylo
|
- support stage
|
2014-01-05 12:07:20 +00:00 |
|
p5-Bio-SCF
|
Remove all the bootstrap files (.bs) from the plists.
|
2014-06-10 12:14:12 +00:00 |
|
p5-bioperl
|
biology/p5-bioperl: fix pkg-descr sidenote link
|
2014-08-04 04:32:38 +00:00 |
|
p5-bioperl-run
|
biology/p5-bioperl-run: 1.6.1 -> 1.6.901, unbreak, stagify
|
2014-08-04 08:54:10 +00:00 |
|
paml
|
Convert a bunch of EXTRACT_SUFX=... into USES=tar:...
|
2014-07-29 19:11:51 +00:00 |
|
phd2fasta
|
Reset maintainership for ports not staged with no pending PR
|
2014-07-23 16:44:27 +00:00 |
|
phrap
|
Replace maintainer's email address with one that seems to work
|
2014-05-10 18:07:52 +00:00 |
|
phred
|
Replace maintainer's email address with one that seems to work
|
2014-05-10 18:07:52 +00:00 |
|
phylip
|
The FreeBSD x11@ and graphics team proudly presents
|
2014-04-16 18:28:47 +00:00 |
|
phyml
|
- Stage support
|
2014-01-31 12:32:55 +00:00 |
|
platon
|
Add a DOCS option.
|
2014-08-03 21:44:23 +00:00 |
|
plink
|
Update the default version of GCC used in the Ports Collection from
|
2014-03-10 20:55:20 +00:00 |
|
plinkseq
|
- Switch to USES=libtool, drop .la files
|
2014-07-22 22:12:15 +00:00 |
|
povchem
|
Rename biology/ patch-xy patches to reflect the files they modify.
|
2014-07-28 14:22:16 +00:00 |
|
primer3
|
Quote ${CC} and similar variables in MAKE_ARGS.
|
2014-05-20 19:32:39 +00:00 |
|
protomol
|
Reset maintainership for ports not staged with no pending PR
|
2014-07-23 16:44:27 +00:00 |
|
psi88
|
Convert a bunch of EXTRACT_SUFX=... into USES=tar:...
|
2014-07-29 19:11:51 +00:00 |
|
py-biopython
|
- Stage
|
2014-04-27 01:59:47 +00:00 |
|
pycogent
|
- Stage support [1]
|
2014-05-02 14:00:13 +00:00 |
|
pyfasta
|
- Update to 0.5.2
|
2014-04-06 04:05:43 +00:00 |
|
pymol
|
Convert a bunch of USE_BZIP2 to USES=tar:bzip2
|
2014-07-29 18:41:15 +00:00 |
|
python-nexus
|
Remove indefinite articles and trailing periods from COMMENT, plus
|
2014-06-09 11:21:52 +00:00 |
|
recombine
|
- Support staging
|
2014-02-16 11:39:42 +00:00 |
|
ruby-bio
|
Support stage
|
2014-04-07 13:01:26 +00:00 |
|
seaview
|
- Update to 4.5.2
|
2014-06-04 06:28:56 +00:00 |
|
seqan
|
Use gcc on all platforms.
|
2014-07-10 22:29:52 +00:00 |
|
seqio
|
Support staging
|
2014-02-16 11:42:09 +00:00 |
|
seqtools
|
USES=execinfo
|
2014-08-04 23:06:21 +00:00 |
|
sim4
|
Support staging
|
2014-02-16 11:43:07 +00:00 |
|
ssaha
|
biology/ssaha: undeprecate, this port fetches and builds fine.
|
2014-03-09 09:39:50 +00:00 |
|
t_coffee
|
Remove indefinite articles and trailing periods from COMMENT, plus
|
2014-06-09 11:21:52 +00:00 |
|
tinker
|
- Un-break fetch stage: the name scheme of the source tarballs has changed
|
2014-04-22 19:28:18 +00:00 |
|
treepuzzle
|
|
|
|
treeviewx
|
Unbreak
|
2014-06-04 20:08:15 +00:00 |
|
tRNAscan-SE
|
Convert a bunch of EXTRACT_SUFX=... into USES=tar:...
|
2014-07-29 19:11:51 +00:00 |
|
ugene
|
USES=execinfo
|
2014-08-04 23:06:21 +00:00 |
|
velvet
|
Convert a bunch of EXTRACT_SUFX=... into USES=tar:...
|
2014-07-29 19:11:51 +00:00 |
|
wise
|
- Add staging support
|
2014-03-24 10:46:35 +00:00 |
|
xmolwt
|
Add staging support
|
2014-03-24 11:06:56 +00:00 |
|
Makefile
|
Remove expired ports:
|
2014-04-18 11:17:45 +00:00 |
