freebsd-ports/biology/gmap/Makefile
Rong-En Fan 741aa71483 Update CONFIGURE_ARGS for how we pass CONFIGURE_TARGET to configure script.
Specifically, newer autoconf (> 2.13) has different semantic of the
configure target. In short, one should use --build=CONFIGURE_TARGET
instead of CONFIGURE_TARGET directly. Otherwise, you will get a warning
and the old semantic may be removed in later autoconf releases.

To workaround this issue, many ports hack the CONFIGURE_TARGET variable
so that it contains the ``--build='' prefix.

To solve this issue, under the fact that some ports still have
configure script generated by the old autoconf, we use runtime detection
in the do-configure target so that the proper argument can be used.

Changes to Mk/*:
 - Add runtime detection magic in bsd.port.mk
 - Remove CONFIGURE_TARGET hack in various bsd.*.mk
 - USE_GNOME=gnometarget is now an no-op

Changes to individual ports, other than removing the CONFIGURE_TARGET hack:

= pkg-plist changed (due to the ugly CONFIGURE_TARGET prefix in * executables)
  - comms/gnuradio
  - science/abinit
  - science/elmer-fem
  - science/elmer-matc
  - science/elmer-meshgen2d
  - science/elmerfront
  - science/elmerpost

= use x86_64 as ARCH
  - devel/g-wrap

= other changes
  - print/magicfilter
    GNU_CONFIGURE -> HAS_CONFIGURE since it's not generated by autoconf

Total # of ports modified:  1,027
Total # of ports affected: ~7,000 (set GNU_CONFIGURE to yes)

PR:		126524 (obsoletes 52917)
Submitted by:	rafan
Tested on:	two pointyhat 7-amd64 exp runs (by pav)
Approved by:	portmgr (pav)
2008-08-21 06:18:49 +00:00

25 lines
629 B
Makefile

# Ports collection makefile for: gmap
# Date created: 24 September 2006
# Whom: Bob Zimmermann <rpz@cse.wustl.edu>
#
# $FreeBSD$
#
PORTNAME= gmap
PORTVERSION= 2006.04.21
CATEGORIES= biology
MASTER_SITES= http://www.gene.com/share/gmap/src/
DISTNAME= ${PORTNAME}-${PORTVERSION:C|\.|-|g}
MAINTAINER= rpz@cse.wustl.edu
COMMENT= A Genomic Mapping and Alignment Program for mRNA and EST Sequences
FETCH_DEPENDS= ${LOCALBASE}/bin/wget:${PORTSDIR}/ftp/wget
FETCH_CMD= ${LOCALBASE}/bin/wget
FETCH_BEFORE_ARGS= --no-check-certificate
DISABLE_SIZE= yes
USE_GMAKE= yes
GNU_CONFIGURE= yes
.include <bsd.port.mk>