freebsd-ports/biology/phrap/files/patch-anomalies.c
Kurt Jaeger 690da7ea38 update ports:
biology/phrab
	biology/phred
	biology/consed

Although these programs are licensed freely for academic and nonprofit
purposes, users have to contact the authors to obtain the tarballs.

PR:		191336
Submitted by:	mzaki@m.u-tokyo.ac.jp (maintainer)
2014-08-23 18:04:58 +00:00

19 lines
538 B
C

--- ./anomalies.c.orig 2008-11-10 06:02:00.000000000 +0100
+++ ./anomalies.c 2014-08-02 12:39:30.000000000 +0200
@@ -28,6 +28,8 @@
extern Parameters *parameters;
extern int num_pairs, t_num_entries;
+void visit_cand_pairs_dups(int, Cand_pair *);
+
#define MAX_CHIMERA_GAP 30 /* maximum gap between distinct confirmed segments for
putative chimeras */
compare_pair_entries(pair_1, pair_2)
@@ -830,6 +832,7 @@
notify(" Done\n");
}
+void
visit_cand_pairs_dups(entry1, pair)
int entry1;
Cand_pair *pair;