0be0763624
VSEARCH supports de novo and reference based chimera detection, clustering, full-length and prefix dereplication, rereplication, reverse complementation, masking, all-vs-all pairwise global alignment, exact and global alignment searching, shuffling, subsampling and sorting. It also supports FASTQ file analysis, filtering, conversion and merging of paired-end reads. The aim of this project is to create an alternative to the USEARCH tool developed by Robert C. Edgar (2010).
10 lines
520 B
Text
10 lines
520 B
Text
VSEARCH supports de novo and reference based chimera detection, clustering,
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full-length and prefix dereplication, rereplication, reverse complementation,
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masking, all-vs-all pairwise global alignment, exact and global alignment
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searching, shuffling, subsampling and sorting. It also supports FASTQ file
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analysis, filtering, conversion and merging of paired-end reads.
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The aim of this project is to create an alternative to the USEARCH tool
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developed by Robert C. Edgar (2010).
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WWW: https://github.com/torognes/vsearch
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