freebsd-ports/biology/spoa/pkg-descr
Stefan Eßer fb16dfecae Remove WWW entries moved into port Makefiles
Commit b7f05445c0 has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
2022-09-07 23:58:51 +02:00

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Text

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA)
algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to
generate consensus sequences. It supports three alignment modes: local
(Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap),
and three gap modes: linear, affine and convex (piecewise affine). It also
supports Intel SSE4.1+ and AVX2 vectorization (marginally faster due to high
latency shifts), SIMDe and dispatching.