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sequences. It stands for Sequence Search and Alignment by Hashing Algorithm. It achieves its fast search speed by converting sequence information into a `hash table' data structure, which can then be searched very rapidly for matches. WWW: http://www.sanger.ac.uk/Software/analysis/SSAHA/ PR: ports/124525 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> Approved by: gabor (mentor, implicit)
13 lines
409 B
Text
13 lines
409 B
Text
--- ./Binary/README.orig 2004-08-25 11:35:58.000000000 -0300
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+++ ./Binary/README 2008-06-12 15:39:31.000000000 -0300
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@@ -34,6 +34,10 @@
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Patched for linux/g++3.2.2 25/8/4 AWS.
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+This version was patched for Linux/GCC 4.0.2 and Mac OS X/GCC 4.0.1 by
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+Conrad Halling on 26 January 2006. See http://www.bifx.org/SSAHA/index.html
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+for more information.
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+
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1. To compile the main ssaha executable
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make ssaha
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