45 lines
1.4 KiB
Makefile
45 lines
1.4 KiB
Makefile
# Created by: Johann Visagie <johann@egenetics.com>
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# $FreeBSD$
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PORTNAME= fasta
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PORTVERSION= 21.1.1
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CATEGORIES= biology
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MASTER_SITES= http://faculty.virginia.edu/wrpearson/fasta/fasta2/ \
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ftp://ftp.ebi.ac.uk/pub/software/unix/fasta/fasta2/
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EXTRACT_SUFX= .shar.Z
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MAINTAINER= ports@FreeBSD.org
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COMMENT= Collection of programs for searching DNA and protein databases
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NO_CDROM= May not be sold or incorporated into a commercial product
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WRKSRC= ${WRKDIR}/fasta
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SUB_FILES= pkg-message
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MAN_FILES= align.1 fasta.1 lalign.1 prdf.1 prss.1 randseq.1 ssearch.1
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PORTDOCS= COPYRIGHT README.versions fasta20.doc fasta20.me format.doc \
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readme.*
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OPTIONS_DEFINE= DOCS
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do-extract:
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@ ${RM} -r ${WRKDIR}
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@ ${MKDIR} ${WRKSRC}
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@ for f in ${EXTRACT_ONLY}; do \
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cd ${WRKSRC} && (${GZCAT} ${DISTDIR}/$${f} | ${SH} >/dev/null); \
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done
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post-patch:
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@${REINPLACE_CMD} 's|BIN)|DESTDIR)$$(&|' ${WRKSRC}/Makefile
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post-install:
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${INSTALL_MAN} ${MAN_FILES:S,^,${WRKSRC}/,} \
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${STAGEDIR}${MAN1PREFIX}/man/man1
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.for mlink in tfasta lfasta plfasta fastx tfastx
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${LN} -s fasta.1.gz ${STAGEDIR}${MAN1PREFIX}/man/man1/${mlink}.1.gz
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.endfor
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${LN} -s align.1.gz ${STAGEDIR}${MAN1PREFIX}/man/man1/align0.1.gz
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${LN} -s align.1.gz ${STAGEDIR}${MAN1PREFIX}/man/man1/plalign.1.gz
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@${MKDIR} ${STAGEDIR}${DOCSDIR}
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${INSTALL_DATA} ${PORTDOCS:S|^|${WRKSRC}/|} ${STAGEDIR}${DOCSDIR}
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.include <bsd.port.mk>
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