freebsd-ports/biology/rainbow/pkg-descr
Stefan Eßer fb16dfecae Remove WWW entries moved into port Makefiles
Commit b7f05445c0 has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.

This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.

Approved by:		portmgr (tcberner)
2022-09-07 23:58:51 +02:00

8 lines
587 B
Text

Rainbow provides an ultra-fast and memory-efficient solution to clustering and
assembling short genetic sequence reads produced by Restriction site Associated
DNA Sequencing (RAD-seq). It does this by, first, clustering reads using a
spaced seed method, then it divides potential groups into haplotypes in a
top-down manner. Next, along a guide tree, it iteratively merges sibling
leaves in a bottom-up manner if they are similar enough. Finally, Rainbow uses
a greedy algorithm to locally assemble merged reads into contigs. Both optimal
and suboptimal assembly results are output.