65 lines
2.3 KiB
Text
65 lines
2.3 KiB
Text
--- Makefile.in.orig Mon May 7 06:58:52 2007
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+++ Makefile.in Fri Aug 31 01:11:04 2007
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@@ -51,7 +51,7 @@
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@OSX_APP_FALSE@am__append_8 = -ggdb
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@NODATA_TRUE@am__append_9 = -DSTATIONARIES -DNOPROGRESSBAR
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@DEBUG_TRUE@am__append_10 = $(debugflags)
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-@DEBUG_FALSE@am__append_11 = -O3 -funroll-loops -DNDEBUG
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+@DEBUG_FALSE@am__append_11 = -DNDEBUG
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@DMALLOC_TRUE@am__append_12 = -ldmallocxx
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@DMALLOC_TRUE@am__append_13 = -DDMALLOC_FUNC_CHECK
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@EFENCE_TRUE@am__append_14 = -lefence
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@@ -1155,7 +1155,7 @@
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CPPFLAGS = @CPPFLAGS@
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CXX = @CXX@
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CXXDEPMODE = @CXXDEPMODE@
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-CXXFLAGS =
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+CXXFLAGS = @CXXFLAGS@
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CYGPATH_W = @CYGPATH_W@
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DEBUG_FALSE = @DEBUG_FALSE@
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DEBUG_TRUE = @DEBUG_TRUE@
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@@ -1994,7 +1994,7 @@
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EXTRA_batch_lam_conv_SOURCES = $(tinyxml_suite)
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lam_conv_app_SOURCES =
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lamarc_app_SOURCES =
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-htmldir = $(prefix)/html/lamarc
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+htmldir = $(prefix)/share/doc/lamarc
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html_DATA = \
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doc/html/bayes.html \
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doc/html/bayes_howto.html \
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@@ -2037,7 +2037,7 @@
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doc/html/viral_data.html \
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doc/html/xmlinput.html
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-htmlimgdir = $(prefix)/html/lamarc/images
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+htmlimgdir = $(prefix)/share/doc/lamarc/images
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htmlimg_DATA = \
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doc/html/images/browser-gtk.gif \
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doc/html/images/correlated1.gif \
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@@ -2054,7 +2054,7 @@
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doc/html/images/uncorrelated.gif \
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doc/html/images/variably_correlated.gif
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-htmlbconvdir = $(prefix)/html/lamarc/batch_converter
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+htmlbconvdir = $(prefix)/share/doc/lamarc/batch_converter
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htmlbconv_DATA = \
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doc/html/batch_converter/README.txt \
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doc/html/batch_converter/chrom1_lamarc.xml \
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@@ -2068,7 +2068,7 @@
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doc/html/batch_converter/exported-lamarc-input.xml \
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doc/html/batch_converter/sample-conv-cmd.xml
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-htmlbconvimgdir = $(prefix)/html/lamarc/batch_converter/images
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+htmlbconvimgdir = $(prefix)/share/doc/lamarc/batch_converter/images
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htmlbconvimg_DATA = \
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doc/html/batch_converter/images/lam_conv_chrom1_export_file_selection.png \
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doc/html/batch_converter/images/lam_conv_chrom1_export_warn_1.png \
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@@ -2082,7 +2082,7 @@
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doc/html/batch_converter/images/lam_conv_chrom3_region_table.png \
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doc/html/batch_converter/images/lam_conv_chrom3_segment_snp.png
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-htmltraitdir = $(prefix)/html/lamarc/trait_mapping
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+htmltraitdir = $(prefix)/share/doc/lamarc/trait_mapping
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htmltrait_DATA = \
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doc/html/trait_mapping/README.txt \
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doc/html/trait_mapping/lamarc-trait-input.xml \
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