freebsd-ports/biology/jalview/files/patch-build.xml
Herve Quiroz cf01181180 Jalview is a multiple alignment editor written in Java. It is used widely in a
variety of web pages (e.g. the EBI Clustalw server and the Pfam protein domain
database) and is also available as a general purpose alignment editor.

WWW: http://www.jalview.org

PR:		93054
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar>
2006-02-13 09:42:13 +00:00

52 lines
1.6 KiB
XML

$FreeBSD$
This patch removes the webstart support.
--- build.xml.orig Mon Dec 12 14:57:02 2005
+++ build.xml Fri Jan 27 12:20:52 2006
@@ -180,6 +180,10 @@
</fileset>
</copy>
<!-- the default keystore details might need to be edited here -->
+<!-- Remove all the remaining stuff for this target
+ which is only necessary if we want to start jalview
+ using java web start. It requires us to generate a key
+ before building the port - Fernan - 27.Jan.2006
<signjar
storepass="alignmentisfun"
keypass="alignmentisfun"
@@ -194,8 +198,9 @@
</fileset>
</signjar>
<taskdef classpathref="build.classpath" resource="com/roxes/tools/ant/taskdefs.properties"/>
-
+-->
<!-- codebase="http://www.jalview.org/jalview/webstart" -->
+<!--
<jnlp toFile="${packageDir}/jalview.jnlp" href="jalview.jnlp"
codebase="${WebStartLocation}">
<information>
@@ -206,6 +211,7 @@
<description kind="short">Jalview</description>
<icon href="logo_big.gif"/>
<offline_allowed/>
+-->
<!--
<association mime-type="application-x/ext-file" extensions="fa"/>
<association mime-type="application-x/ext-file" extensions="fasta"/>
@@ -216,6 +222,7 @@
<association mime-type="application-x/ext-file" extensions="aln"/>
<association mime-type="application-x/ext-file" extensions="pir"/>
-->
+<!--
</information>
<resources>
<j2se version="1.4+"/>
@@ -234,6 +241,7 @@
<all_permissions/>
</security>
</jnlp>
+-->
</target>
<target name="runenv" depends="init">
<path id="run.classpath">