Li-Wen Hsu a9d9e51855 - Update to 1.4.4 ... PR: ports/146861 Submitted by: Sunpoet Po-Chuan Hsieh <sunpoet AT sunpoet.net> (maintainer)		2010-05-23 10:21:00 +00:00
..
2d-rewriter	- Update to 1.4	2010-01-12 03:02:16 +00:00
2dhf	- Change sed delimiters away from ,	2009-10-04 20:26:01 +00:00
abinit	- Fix build, abinit builds with science/netcdf3-ftn	2010-05-20 14:28:00 +00:00
afni	- update to 1.4.1	2010-03-28 06:47:48 +00:00
at	Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now	2009-09-13 00:08:01 +00:00
avogadro	- update to 1.4.1	2010-03-28 06:47:48 +00:00
bblimage
bddsolve	Bddsolve is a BDD-based tool for solving satisfiability and reachability	2010-05-12 13:25:37 +00:00
bft	Trying to chase Zlib's upgrade in -CURRENT.	2010-05-01 12:34:56 +00:00
bodr	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
brian	- update to 1.4.1	2010-03-28 06:47:48 +00:00
buddy	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
cdcl	- update to 1.4.1	2010-03-28 06:47:48 +00:00
cdf	- Update to 3.3.0	2010-01-21 21:14:54 +00:00
cdo	- Update to 1.4.4	2010-05-23 10:21:00 +00:00
cgnslib	Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now	2009-09-13 00:08:01 +00:00
checkmol	Checkmol is a command-line utility program which reads molecular	2009-09-19 09:53:55 +00:00
chemical-mime-data	- update to 1.4.1	2010-03-28 06:47:48 +00:00
chemtool	- update to 1.4.1	2010-03-28 06:47:48 +00:00
chemtool-devel	- update to 1.4.1	2010-03-28 06:47:48 +00:00
clhep	- Update to 2.0.4.6	2010-03-12 12:28:58 +00:00
colt
crf++	- Update to 0.53	2010-04-20 03:36:51 +00:00
dcl	Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now	2009-09-13 00:08:01 +00:00
devisor
dtiquery	- Chase math/vtk5 update	2010-04-03 15:36:30 +00:00
ecs	- update to 1.4.1	2010-03-28 06:47:48 +00:00
elmer-eio	- Update my mail address to FreeBSD	2009-11-27 22:52:30 +00:00
elmer-fem	- Update my mail address to FreeBSD	2009-11-27 22:52:30 +00:00
elmer-hutiter	- Update my mail address to FreeBSD	2009-11-27 22:52:30 +00:00
elmer-matc	- Update my mail address to FreeBSD	2009-11-27 22:52:30 +00:00
elmer-meshgen2d	- Update my mail address to FreeBSD	2009-11-27 22:52:30 +00:00
elmergrid	- Update my mail address to FreeBSD	2009-11-27 22:52:30 +00:00
elmerpost	- Update my mail address to FreeBSD	2009-11-27 22:52:30 +00:00
euler	- update to 1.4.1	2010-03-28 06:47:48 +00:00
fastcap
fasthenry
felt	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
flounder	- update to 1.4.1	2010-03-28 06:47:48 +00:00
fvm	- Chase relocation of net/mpich2	2009-11-28 10:44:56 +00:00
g3data	- update to 1.4.1	2010-03-28 06:47:48 +00:00
gamess	Fix SMP run on amd64, and bump port revision	2010-02-16 23:53:17 +00:00
gave	- update to 1.4.1	2010-03-28 06:47:48 +00:00
gchemutils	Chase devel/goffice update.	2010-05-21 23:08:53 +00:00
gdis	- update to 1.4.1	2010-03-28 06:47:48 +00:00
gerris	Presenting GNOME 2.30.1 for FreeBSD. The offical release notes for this	2010-05-10 21:19:08 +00:00
getdp	- Bump PORTREVISION to chase the update of math/gsl	2010-03-29 01:12:27 +00:00
ghemical	- update to 1.4.1	2010-03-28 06:47:48 +00:00
ghmm	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
gnudatalanguage	- Bump PORTREVISION to chase the update of math/gsl	2010-03-29 01:12:27 +00:00
gramps	- update to 1.4.1	2010-03-28 06:47:48 +00:00
gromacs	- Bump PORTREVISION to chase the update of math/gsl	2010-03-29 01:12:27 +00:00
gsmc	- update to 1.4.1	2010-03-28 06:47:48 +00:00
gsystem	- update to 1.4.1	2010-03-28 06:47:48 +00:00
gtamsanalyzer	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
gwyddion	- update to 1.4.1	2010-03-28 06:47:48 +00:00
harminv	Harminv is a free program (and accompanying library) to solve the problem	2010-01-02 02:54:00 +00:00
hdf	- update to jpeg-8	2010-02-05 11:46:55 +00:00
hdf-java	The HDF Java Products include a visual tool for browsing and editing HDF	2010-02-13 11:21:53 +00:00
hdf5	- Add CONFLICTS with science/hdf5-18	2009-12-10 19:15:13 +00:00
hdf5-18	- Fixed WWW: link	2010-05-05 14:53:19 +00:00
hs-bio	- Fix build problem caused by the recent textproc/hs-tagsoup update	2010-05-20 10:39:45 +00:00
ics	- update to 1.4.1	2010-03-28 06:47:48 +00:00
InsightToolkit	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
isaac-cfd	Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now	2009-09-13 00:08:01 +00:00
jmol	- Update to 11.8.7	2009-10-09 13:07:57 +00:00
kmovisto	- update to 1.4.1	2010-03-28 06:47:48 +00:00
kst	Add optional dependency on kdebase3	2010-05-22 16:19:03 +00:00
kst2	Add optional dependency on kdebase3	2010-05-22 16:19:03 +00:00
lamprop
libctl	- Update to 3.1	2010-01-24 02:11:31 +00:00
libghemical	- Mark BROKEN: does not compile	2010-03-02 23:08:23 +00:00
libint
libkml	libkml is a library for use with applications that want to	2009-10-07 11:10:21 +00:00
liblinear	- Update to 1.5	2009-10-29 11:09:53 +00:00
liboglappth
libquantum	libquantum is a C library for the simulation of quantum	2009-08-14 20:02:07 +00:00
libsvm	Update to 2.91 which includes a new rewritten Python interface	2010-04-05 10:24:25 +00:00
libsvm-python	Update to 2.91 which includes a new rewritten Python interface	2010-04-05 10:24:25 +00:00
linsmith	- update to 1.4.1	2010-03-28 06:47:48 +00:00
massxpert	The massXpert project aims at providing (bio)chemists with a software	2010-05-20 09:43:14 +00:00
mayavi	- update to 1.4.1	2010-03-28 06:47:48 +00:00
mbdyn	- Chase relocation of net/mpich2	2009-11-28 10:44:56 +00:00
mcstas	- update to 1.4.1	2010-03-28 06:47:48 +00:00
medit
meep	Meep (or MEEP) is a free finite-difference time-domain (FDTD) simulation	2010-01-25 00:27:10 +00:00
minc	-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.	2009-08-02 19:36:34 +00:00
minc2	-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.	2009-08-02 19:36:34 +00:00
mol2ps	mol2ps is a freely available command-line utility program which reads	2009-09-19 11:02:46 +00:00
mpb	- Bump PORTREVISION to chase the update of libctl	2010-01-24 02:14:17 +00:00
mpqc	- update to 1.4.1	2010-03-28 06:47:48 +00:00
mpqc-mpich
ncs	- update to 1.4.1	2010-03-28 06:47:48 +00:00
netcdf	- Update MASTER_SITES	2010-05-15 05:40:57 +00:00
netcdf-ftn	- Since we have netcdf3-ftn, remove netcdf3 part from Makefile.	2010-05-20 14:25:09 +00:00
netcdf3-ftn	Add netcdf3-ftn , netCDF (network Common Data Form), with Fortran	2010-05-20 14:21:43 +00:00
netcdf4	- Fix duplicated LATEST_LINK	2010-05-15 18:37:25 +00:00
nifticlib	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
oases	Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now	2009-09-13 00:08:01 +00:00
omnetpp	- update to 1.4.1	2010-03-28 06:47:48 +00:00
openbabel	Builds on ia64.	2009-11-11 16:12:14 +00:00
ovt	- update to 1.4.1	2010-03-28 06:47:48 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder	Perl module which generates a three-dimensional molecular structure from a	2010-04-02 15:33:52 +00:00
p5-Chemistry-Bond-Find	Perl module which provides functions for detecting the bonds in a molecule from	2010-04-02 15:24:14 +00:00
p5-Chemistry-Canonicalize	Perl module which provides functions for "canonicalizing" a molecular	2010-04-02 15:25:12 +00:00
p5-Chemistry-Elements	- lang/perl5.6 is dead, remove PERL_LEVEL/PERL_VERSION < 500801 checks	2009-07-22 16:27:08 +00:00
p5-Chemistry-File-MDLMol	Perl module which will parse a SMARTS (SMiles ARbitrary Target Specification)	2010-04-02 15:34:39 +00:00
p5-Chemistry-File-Mopac	MOPAC 6 input file reader/writer	2010-04-02 15:32:24 +00:00
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN	SLN linear notation parser/writer	2010-04-02 15:33:24 +00:00
p5-Chemistry-File-SMARTS	Perl module which will parse a SMARTS (SMiles ARbitrary Target Specification)	2010-04-02 15:34:39 +00:00
p5-Chemistry-File-SMILES	Perl module which parses a SMILES (Simplified Molecular Input Line Entry	2010-04-02 15:35:47 +00:00
p5-Chemistry-File-VRML	Generate VRML models for molecules	2010-04-02 15:28:04 +00:00
p5-Chemistry-File-XYZ	XYZ molecule format reader/writer	2010-04-02 15:28:42 +00:00
p5-Chemistry-FormulaPattern	Match molecule by formula	2010-04-02 15:31:34 +00:00
p5-Chemistry-InternalCoords	Perl module implements an object class for representing internal	2010-04-02 15:35:23 +00:00
p5-Chemistry-Isotope	Perl module which contains the exact mass data from the table of the isotopes.	2010-04-02 15:26:37 +00:00
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern	Select atoms in macromolecule	2010-04-02 15:29:58 +00:00
p5-Chemistry-Mok	- Update to 0.25	2010-04-05 23:25:24 +00:00
p5-Chemistry-Mol
p5-Chemistry-Pattern	Perl module which implements basic pattern matching for molecules.	2010-04-02 15:25:56 +00:00
p5-Chemistry-Reaction	Explicit chemical reactions	2010-04-02 15:32:03 +00:00
p5-Chemistry-Ring	Perl module which provides some basic methods for representing a ring.	2010-04-02 15:27:22 +00:00
p5-Geo-ReadGRIB	- Update to 1.21	2009-11-22 03:15:14 +00:00
p5-Geo-WebService-Elevation-USGS	Geo::WebService::Elevation::USGS executes elevation queries against the	2010-01-15 07:20:43 +00:00
p5-PerlMol	Perl modules for molecular chemistry	2010-04-02 15:36:26 +00:00
paje
paraview	- fix build for png-1.4.1	2010-03-30 04:48:54 +00:00
pcp	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
peekabot	- Mark BROKEN on sparc64	2010-05-04 11:43:33 +00:00
pnetcdf	- Update to 1.1.1	2010-02-02 22:43:01 +00:00
psi3	Build fix with gotoblas.	2010-02-16 07:23:49 +00:00
psychopy	- update to 1.4.1	2010-03-28 06:47:48 +00:00
py-DendroPy	- Update to 3.3.0	2010-05-13 06:08:26 +00:00
py-h5py	- Add py-numpy into RUN_DEPENDS	2010-02-01 11:27:58 +00:00
py-hcluster	- update to 1.4.1	2010-03-28 06:47:48 +00:00
py-mdp	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
py-mlpy	- Bump PORTREVISION to chase the update of math/gsl	2010-03-29 01:12:27 +00:00
py-netCDF4	- Update to 0.9.1	2010-04-11 23:28:17 +00:00
py-openbabel	Update to 2.2.2	2009-08-10 17:14:49 +00:00
py-paida	- Get rip python 2.3+	2009-12-13 17:00:14 +00:00
py-pydicom
py-scipy	- Update to 0.7.2	2010-04-26 07:17:47 +00:00
pybrain	PyBrain is a modular Machine Learning Library for Python.	2009-11-19 13:44:38 +00:00
pycdf	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
pynn	PyNN(pronounced 'pine') is a simulator-independent language for	2010-05-19 05:31:44 +00:00
pyvox
qcl
qtresistors	- update to 1.4.1	2010-03-28 06:47:48 +00:00
ruby-dcl	- update to 1.4.1	2010-03-28 06:47:48 +00:00
ruby-gphys	- Update to 1.0.0	2010-04-28 06:00:33 +00:00
ruby-netcdf	- Assign all unmaintained ruby ports to ruby@,	2009-06-16 15:53:25 +00:00
silo	- update to 1.4.1	2010-03-28 06:47:48 +00:00
simlib	Not for powerpc, either.	2010-04-01 10:24:44 +00:00
svmlight
szip	-Repocopy devel/libtool15 -> libtool22 and libltdl15 -> libltdl22.	2009-08-02 19:36:34 +00:00
udunits	- Update to 2.1.14	2010-03-08 23:14:22 +00:00
v_sim	Upgrade to 3.5.1.	2010-04-25 19:57:37 +00:00
vis5d+	- update to 1.4.1	2010-03-28 06:47:48 +00:00
vmd	- update to 1.4.1	2010-03-28 06:47:48 +00:00
x11iraf
xmakemol	For ports maintained by ports@FreeBSD.org, remove names and/or	2009-12-21 02:19:12 +00:00
xmds	- Switch SourceForge ports to the new File Release System: categories starting with P,R,S	2009-08-22 00:35:32 +00:00
Makefile	Add netcdf3-ftn , netCDF (network Common Data Form), with Fortran	2010-05-20 14:21:43 +00:00