d667344504
- Pass maintainership to submitter PR: ports/74332 Submitted by: Fernan Aguero <fernan(at)iib.unsam.edu.ar>
45 lines
1.3 KiB
Makefile
45 lines
1.3 KiB
Makefile
# New ports collection makefile for: t_coffee
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# Date created: 27 June 2001
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# Whom: Johann Visagie <wjv@FreeBSD.org>
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#
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# $FreeBSD$
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#
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PORTNAME= t_coffee
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PORTVERSION= 2.03
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CATEGORIES= biology
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MASTER_SITES= http://igs-server.cnrs-mrs.fr/~cnotred/Packages/
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DISTNAME= T-COFFEE_distribution_Version_${PORTVERSION}
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MAINTAINER= fernan@iib.unsam.edu.ar
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COMMENT= A multiple DNA or protein sequence alignment package
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BUILD_DEPENDS= clustalw:${PORTSDIR}/biology/clustalw
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RUN_DEPENDS= ${BUILD_DEPENDS}
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BUILD_WRKSRC= ${WRKSRC}/t_coffee_source
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MAKE_ENV= MV=${MV} USER_BIN=${PREFIX}/bin \
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CLUSTALW_4_TCOFFEE=${LOCALBASE}/bin/clustalw
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MAKEFILE= makefile
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SCRIPTS= msf_aln2fasta_aln.pl blast_aln2fasta_aln.pl \
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fasta_aln2fasta_aln_unique_name.pl extract_from_pdb \
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fugue_client t_coffee_dpa t_coffee_dpa2 mocca
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do-install:
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@ ${INSTALL_PROGRAM} ${WRKSRC}/bin/t_coffee ${PREFIX}/bin
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.for scriptfile in ${SCRIPTS}
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@ ${INSTALL_SCRIPT} ${WRKSRC}/bin/${scriptfile} ${PREFIX}/bin
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.endfor
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post-install:
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.if !defined(NOPORTDOCS)
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@ ${MKDIR} ${DOCSDIR}
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@ ${INSTALL_DATA} ${WRKSRC}/doc/* ${DOCSDIR}
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@ ${MKDIR} ${EXAMPLESDIR}
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@ ${RMDIR} ${WRKSRC}/example/aln 2>/dev/null || ${TRUE}
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@ cd ${WRKSRC}/example && ${FIND} * \
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| ${CPIO} --quiet -pdum -R ${SHAREOWN}:${SHAREGRP} ${EXAMPLESDIR}
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.endif
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.include <bsd.port.mk>
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