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pkgsrc-wip/biopython/Makefile

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Delint: - convert spaces to tabs (pkglint --autofix) - set, not append to USE_LANGUAGES
2006-10-29 09:32:37 +01:00
# $NetBSD: Makefile,v 1.10 2006/10/29 08:32:38 shattered Exp $
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
#
Update the package to make use of correct setup provided by python packages. Also updated PLIST to reflect the new changes made in Makefile
2005-08-22 21:48:41 +02:00
DISTNAME= biopython-1.40b
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
CATEGORIES= biology
Change the URL for this package.
2006-08-14 02:59:34 +02:00
MASTER_SITES= http://biopython.org/DIST/
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
MAINTAINER= dprice@cs.nmsu.edu
Removed unnecessary definition of WRKSRC. Fixed HOMEPAGE to be a valid URL.
2005-11-03 14:18:36 +01:00
HOMEPAGE= http://biopython.org/
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
COMMENT= Python libraries for computational molecular biology
no-commercial-use, not non-commercial use.
2005-09-29 15:47:28 +02:00
LICENSE= no-commercial-use
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
Update the package to make use of correct setup provided by python packages. Also updated PLIST to reflect the new changes made in Makefile
2005-08-22 21:48:41 +02:00
PY_PATCHPLIST= YES
Delint: - convert spaces to tabs (pkglint --autofix) - set, not append to USE_LANGUAGES
2006-10-29 09:32:37 +01:00
PYDISTUTILSPKG= YES
Update the package to make use of correct setup provided by python packages. Also updated PLIST to reflect the new changes made in Makefile
2005-08-22 21:48:41 +02:00
NO_CONFIGURE= YES
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
Update the package to make use of correct setup provided by python packages. Also updated PLIST to reflect the new changes made in Makefile
2005-08-22 21:48:41 +02:00
post-install:
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
${INSTALL_DATA_DIR} ${PREFIX}/share/doc/biopython
Since make(1)'s .for operator does not interpret shell globs, those .for loops have been removed. In the other .for loops, the variable names have been converted to lowercase to not conflict with other make(1) variables.
2006-01-17 10:07:19 +01:00
${INSTALL_DATA} ${WRKSRC}/Doc/*.txt ${PREFIX}/share/doc/biopython
.for f in README LICENSE CONTRIB
${INSTALL_DATA} ${WRKSRC}/${f} ${PREFIX}/share/doc/biopython
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
.endfor
${INSTALL_DATA_DIR} ${PREFIX}/share/examples/biopython
Since make(1)'s .for operator does not interpret shell globs, those .for loops have been removed. In the other .for loops, the variable names have been converted to lowercase to not conflict with other make(1) variables.
2006-01-17 10:07:19 +01:00
${INSTALL_DATA} ${WRKSRC}/Doc/examples/*.py \
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
${PREFIX}/share/examples/biopython
Since make(1)'s .for operator does not interpret shell globs, those .for loops have been removed. In the other .for loops, the variable names have been converted to lowercase to not conflict with other make(1) variables.
2006-01-17 10:07:19 +01:00
${INSTALL_DATA} ${WRKSRC}/Doc/examples/*.fasta \
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
${PREFIX}/share/examples/biopython
Since make(1)'s .for operator does not interpret shell globs, those .for loops have been removed. In the other .for loops, the variable names have been converted to lowercase to not conflict with other make(1) variables.
2006-01-17 10:07:19 +01:00
${INSTALL_DATA} ${WRKSRC}/Doc/examples/*.aln \
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
${PREFIX}/share/examples/biopython
${INSTALL_DATA_DIR} ${PREFIX}/share/examples/biopython/nmr
Since make(1)'s .for operator does not interpret shell globs, those .for loops have been removed. In the other .for loops, the variable names have been converted to lowercase to not conflict with other make(1) variables.
2006-01-17 10:07:19 +01:00
${INSTALL_DATA} ${WRKSRC}/Doc/examples/nmr/* \
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
${PREFIX}/share/examples/biopython/nmr
Update the package to make use of correct setup provided by python packages. Also updated PLIST to reflect the new changes made in Makefile
2005-08-22 21:48:41 +02:00
.include "../../time/py-mxDateTime/buildlink3.mk"
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
.include "../../math/py-Numeric/buildlink3.mk"
Update the package to make use of correct setup provided by python packages. Also updated PLIST to reflect the new changes made in Makefile
2005-08-22 21:48:41 +02:00
.include "../../lang/python/extension.mk"
The Biopython package contains high-quality, reusable modules and scripts written in Python to make it as easy as possible to use Python for bioinformatics. The Biopython includes the follwing: the ability to parse bioinformatics files into python utilizable data structures, including support for the formats such as Blast output, Clustalw, FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP, Rebase, UniGene, and SwissProt.
2004-11-18 22:02:38 +01:00
.include "../../mk/bsd.pkg.mk"
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