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Import py27-csb-1.2.3 as wip/py-csb.

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Computational Structural Biology Toolbox
This commit is contained in:
Kamel Ibn Aziz Derouiche 2014-06-20 19:57:21 +00:00 committed by Thomas Klausner
parent db7bfd4e66
commit 062e257712
4 changed files with 356 additions and 0 deletions
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py-csb/DESCR Normal file
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Computational Structural Biology Toolbox

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py-csb/Makefile Normal file
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# $NetBSD: Makefile,v 1.1 2014/06/20 19:57:21 jihbed Exp $
DISTNAME= csb-1.2.3
PKGNAME= ${PYPKGPREFIX}-${DISTNAME}
CATEGORIES= biology python
MASTER_SITES= https://pypi.python.org/packages/source/c/csb/
EXTRACT_SUFX= .zip
MAINTAINER= jihbed.research@gmail.com
HOMEPAGE= http://csb.codeplex.com
COMMENT= Computational Structural Biology Toolbox
LICENSE= mit
USE_LANGUAGES= # none
PYDISTUTILSPKG= yes
.include "../../lang/python/extension.mk"
.include "../../math/py-numpy/buildlink3.mk"
DEPENDS+= ${PYPKGPREFIX}-scipy>=0.12.0:../../math/py-scipy
.include "../../mk/bsd.pkg.mk"

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@comment $NetBSD: PLIST,v 1.1 2014/06/20 19:57:21 jihbed Exp $
${PYSITELIB}/csb/__init__.py
${PYSITELIB}/csb/__init__.pyc
${PYSITELIB}/csb/__init__.pyo
${PYSITELIB}/csb/apps/__init__.py
${PYSITELIB}/csb/apps/__init__.pyc
${PYSITELIB}/csb/apps/__init__.pyo
${PYSITELIB}/csb/apps/bfit.py
${PYSITELIB}/csb/apps/bfit.pyc
${PYSITELIB}/csb/apps/bfit.pyo
${PYSITELIB}/csb/apps/bfite.py
${PYSITELIB}/csb/apps/bfite.pyc
${PYSITELIB}/csb/apps/bfite.pyo
${PYSITELIB}/csb/apps/buildhmm.py
${PYSITELIB}/csb/apps/buildhmm.pyc
${PYSITELIB}/csb/apps/buildhmm.pyo
${PYSITELIB}/csb/apps/csfrag.py
${PYSITELIB}/csb/apps/csfrag.pyc
${PYSITELIB}/csb/apps/csfrag.pyo
${PYSITELIB}/csb/apps/embd.py
${PYSITELIB}/csb/apps/embd.pyc
${PYSITELIB}/csb/apps/embd.pyo
${PYSITELIB}/csb/apps/helloworld.py
${PYSITELIB}/csb/apps/helloworld.pyc
${PYSITELIB}/csb/apps/helloworld.pyo
${PYSITELIB}/csb/apps/hhfrag.py
${PYSITELIB}/csb/apps/hhfrag.pyc
${PYSITELIB}/csb/apps/hhfrag.pyo
${PYSITELIB}/csb/apps/hhsearch.py
${PYSITELIB}/csb/apps/hhsearch.pyc
${PYSITELIB}/csb/apps/hhsearch.pyo
${PYSITELIB}/csb/apps/precision.py
${PYSITELIB}/csb/apps/precision.pyc
${PYSITELIB}/csb/apps/precision.pyo
${PYSITELIB}/csb/apps/promix.py
${PYSITELIB}/csb/apps/promix.pyc
${PYSITELIB}/csb/apps/promix.pyo
${PYSITELIB}/csb/bio/__init__.py
${PYSITELIB}/csb/bio/__init__.pyc
${PYSITELIB}/csb/bio/__init__.pyo
${PYSITELIB}/csb/bio/fragments/__init__.py
${PYSITELIB}/csb/bio/fragments/__init__.pyc
${PYSITELIB}/csb/bio/fragments/__init__.pyo
${PYSITELIB}/csb/bio/fragments/rosetta.py
${PYSITELIB}/csb/bio/fragments/rosetta.pyc
${PYSITELIB}/csb/bio/fragments/rosetta.pyo
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${PYSITELIB}/csb/bio/hmm/pseudocounts.py
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${PYSITELIB}/csb/bio/io/clans.pyo
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${PYSITELIB}/csb/bio/io/wwpdb.py
${PYSITELIB}/csb/bio/io/wwpdb.pyc
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${PYSITELIB}/csb/bio/nmr/__init__.py
${PYSITELIB}/csb/bio/nmr/__init__.pyc
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${PYSITELIB}/csb/bio/nmr/resources/AtomConnectivity.xml
${PYSITELIB}/csb/bio/nmr/resources/RandomCoil.Corrections.tsv
${PYSITELIB}/csb/bio/nmr/resources/RandomCoil.Reference.tsv
${PYSITELIB}/csb/bio/sequence/__init__.py
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${PYSITELIB}/csb/bio/sequence/__init__.pyo
${PYSITELIB}/csb/bio/sequence/alignment.py
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${PYSITELIB}/csb/bio/structure/__init__.py
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${PYSITELIB}/csb/bio/structure/__init__.pyo
${PYSITELIB}/csb/bio/utils/__init__.py
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${PYSITELIB}/csb/bio/utils/__init__.pyo
${PYSITELIB}/csb/build.py
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${PYSITELIB}/csb/build.pyo
${PYSITELIB}/csb/core/__init__.py
${PYSITELIB}/csb/core/__init__.pyc
${PYSITELIB}/csb/core/__init__.pyo
${PYSITELIB}/csb/io/__init__.py
${PYSITELIB}/csb/io/__init__.pyc
${PYSITELIB}/csb/io/__init__.pyo
${PYSITELIB}/csb/io/plots.py
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${PYSITELIB}/csb/io/tsv.py
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${PYSITELIB}/csb/numeric/__init__.py
${PYSITELIB}/csb/numeric/__init__.pyc
${PYSITELIB}/csb/numeric/__init__.pyo
${PYSITELIB}/csb/numeric/integrators.py
${PYSITELIB}/csb/numeric/integrators.pyc
${PYSITELIB}/csb/numeric/integrators.pyo
${PYSITELIB}/csb/statistics/__init__.py
${PYSITELIB}/csb/statistics/__init__.pyc
${PYSITELIB}/csb/statistics/__init__.pyo
${PYSITELIB}/csb/statistics/ars.py
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${PYSITELIB}/csb/statistics/maxent.py
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${PYSITELIB}/csb/statistics/mixtures.py
${PYSITELIB}/csb/statistics/mixtures.pyc
${PYSITELIB}/csb/statistics/mixtures.pyo
${PYSITELIB}/csb/statistics/pdf/__init__.py
${PYSITELIB}/csb/statistics/pdf/__init__.pyc
${PYSITELIB}/csb/statistics/pdf/__init__.pyo
${PYSITELIB}/csb/statistics/pdf/parameterized.py
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${PYSITELIB}/csb/statistics/rand.py
${PYSITELIB}/csb/statistics/rand.pyc
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${PYSITELIB}/csb/statistics/samplers/__init__.py
${PYSITELIB}/csb/statistics/samplers/__init__.pyc
${PYSITELIB}/csb/statistics/samplers/__init__.pyo
${PYSITELIB}/csb/statistics/samplers/mc/__init__.py
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${PYSITELIB}/csb/statistics/samplers/mc/__init__.pyo
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${PYSITELIB}/csb/statistics/samplers/mc/propagators.py
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${PYSITELIB}/csb/statistics/samplers/mc/propagators.pyo
${PYSITELIB}/csb/statistics/samplers/mc/singlechain.py
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${PYSITELIB}/csb/statmech/__init__.py
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${PYSITELIB}/csb/test/cases/bio/__init__.py
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py-csb/distinfo Normal file
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$NetBSD: distinfo,v 1.1 2014/06/20 19:57:21 jihbed Exp $
SHA1 (csb-1.2.3.zip) = 7ac31d260439d460d235a7a71d41774e5d51486d
RMD160 (csb-1.2.3.zip) = 9b1149118620283f800e4e3e6b661350be86e04f
Size (csb-1.2.3.zip) = 6699061 bytes