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Update R-bnlearn to version 3.3. Major changes:

Browse source 
* fixed cpdag() and cextend(), which returned an error about
     the input graph being cyclic when it included the CPDAG of
     a shielded collider (thanks Jean-Baptiste Denis).
  * do not generate observations from redundant variables (those
     not in the upper closure of event and evidence) in cpdag()
     and cpquery().
  * added Pena's relevant() nodes identification.
  * make custom.fit() robust against floating point errors
     (thanks Jean-Baptiste Denis).
  * check v-structures do not introduce directed cycles in the
     graph when applying them (thanks Jean-Baptiste Denis).
  * fixed a buffer overflow in cextend() (thanks Jean-Baptiste
     Denis).
  * added a "strict" argument to cextend().
  * removed Depends on the graph package, which is in Suggests
     once more.
  * prefer the parallel package to snow, if it is available.
  * replace NaNs in bn.fit objects with uniform conditional
     probabilities when calling as.grain(), with a warning
     instead of an error.
  * remove reserved characters from levels in write.{dsc,bif,net}().
  * fix the Gaussian mutual information test (thanks Alex Lenkoski).
This commit is contained in:
Mike M. Volokhov 2013-03-29 13:12:00 +00:00 committed by Thomas Klausner
parent 24de6b4a71
commit a9190bbc1d
2 changed files with 6 additions and 7 deletions
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5
R-bnlearn/Makefile
View file

@ -1,4 +1,4 @@
# $NetBSD: Makefile,v 1.10 2013/03/19 01:22:55 bubuchka Exp $
# $NetBSD: Makefile,v 1.11 2013/03/29 13:12:00 bubuchka Exp $
CATEGORIES= math
MASTER_SITES= ${MASTER_SITE_R_CRAN:=contrib/}
@ -9,7 +9,7 @@ COMMENT= Bayesian network structure learning, parameter learning and inference
LICENSE= gnu-gpl-v2 OR gnu-gpl-v3
R_PKGNAME= bnlearn
R_PKGVER= 3.2
R_PKGVER= 3.3
USE_LANGUAGES= c fortran
@ -17,5 +17,4 @@ BUILDLINK_API_DEPENDS.R+= R>=2.13.2
.include "../../math/R/Makefile.extension"
.include "../../devel/gettext-lib/buildlink3.mk"
.include "../../wip/R-graph/buildlink3.mk"
.include "../../mk/bsd.pkg.mk"

8
R-bnlearn/distinfo
View file

@ -1,5 +1,5 @@
$NetBSD: distinfo,v 1.4 2012/12/31 20:03:09 bubuchka Exp $
$NetBSD: distinfo,v 1.5 2013/03/29 13:12:00 bubuchka Exp $
SHA1 (R/bnlearn_3.2.tar.gz) = 28b7ba5422624b65d25e36e3bb10ac11d5fc5c49
RMD160 (R/bnlearn_3.2.tar.gz) = 46156018b2915193641478bbcc2c3293bb141d0e
Size (R/bnlearn_3.2.tar.gz) = 1012632 bytes
SHA1 (R/bnlearn_3.3.tar.gz) = b83229b83ca0c68ee7d37dd49ce8ecdb4610a5e9
RMD160 (R/bnlearn_3.3.tar.gz) = 761261bff13059f0ba1675c3e856265f447b58b5
Size (R/bnlearn_3.3.tar.gz) = 1014046 bytes