Import py27-epigrass-2.3.1 as wip/py-epigrass.
Epigrass is a software for visualizing, analyzing and simulating of epidemic processes on geo-referenced networks EpiGrass can interact with the GRASS GIS from which it can obtain maps and other geo-referenced information. However, EpiGrass does not require an installation of the GRASS GIS for most of its features.
This commit is contained in:
Kamel Ibn Aziz Derouiche
Thomas Klausner
parent
d26c885a24
commit
e6725f8e3f
5 changed files with 199 additions and 0 deletions
6
py-epigrass/DESCR
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6
py-epigrass/DESCR
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Epigrass is a software for visualizing, analyzing and simulating of
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epidemic processes on geo-referenced networks
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EpiGrass can interact with the GRASS GIS from which it can obtain maps and other
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geo-referenced information. However, EpiGrass does not require an installation
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of the GRASS GIS for most of its features.
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27
py-epigrass/Makefile
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27
py-epigrass/Makefile
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# $NetBSD: Makefile,v 1.1 2013/09/07 19:53:40 jihbed Exp $
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DISTNAME= epigrass-2.3.1
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PKGNAME= ${PYPKGPREFIX}-${DISTNAME}
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CATEGORIES= biology python
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MASTER_SITES= https://pypi.python.org/packages/source/e/epigrass/
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MAINTAINER= jihbed.research@gmail.com
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HOMEPAGE= https://pypi.python.org/pypi/epigrass/
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COMMENT= Epidemiological Geo-Referenced Analysis and Simulation System
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LICENSE= gnu-gpl-v2
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WRKSRC= ${WRKDIR}/epigrass-2.3.1
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USE_LANGUAGES= # none
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DEPENDS+= ${PYPKGPREFIX}-mysqldb>=1.2.3:../../databases/py-mysqldb
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DEPENDS+= ${PYPKGPREFIX}-networkx>=1.7:../../math/py-networkx
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DEPENDS+= ${PYPKGPREFIX}-redis-py>=2.8.0:../../wip/py-redis-py
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PYTHON_VERSION_DEFAULT= 26 27
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.include "../../graphics/py-matplotlib/buildlink3.mk"
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.include "../../lang/python/egg.mk"
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.include "../../math/py-numpy/buildlink3.mk"
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.include "../../sysutils/desktop-file-utils/desktopdb.mk"
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.include "../../x11/py-qt4/buildlink3.mk"
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.include "../../mk/bsd.pkg.mk"
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133
py-epigrass/PLIST
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py-epigrass/PLIST
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@comment $NetBSD: PLIST,v 1.1 2013/09/07 19:53:40 jihbed Exp $
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bin/epgeditor
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bin/epigrass
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bin/epirunner
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bin/neteditor
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${PYSITELIB}/Epigrass/HelpEpg.html
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${PYSITELIB}/Epigrass/Ui_about4.py
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${PYSITELIB}/Epigrass/Ui_about4.pyc
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${PYSITELIB}/Epigrass/Ui_about4.pyo
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${PYSITELIB}/Epigrass/Ui_cpanel4new.py
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${PYSITELIB}/Epigrass/Ui_cpanel4new.pyc
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${PYSITELIB}/Epigrass/Ui_cpanel4new.pyo
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${PYSITELIB}/Epigrass/Ui_display.py
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${PYSITELIB}/Epigrass/Ui_display.pyc
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${PYSITELIB}/Epigrass/Ui_display.pyo
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${PYSITELIB}/Epigrass/Ui_epgeditor.py
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${PYSITELIB}/Epigrass/Ui_epgeditor.pyc
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${PYSITELIB}/Epigrass/Ui_epgeditor.pyo
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${PYSITELIB}/Epigrass/Ui_neteditor.py
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${PYSITELIB}/Epigrass/Ui_neteditor.pyc
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${PYSITELIB}/Epigrass/Ui_neteditor.pyo
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${PYSITELIB}/Epigrass/__init__.py
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${PYSITELIB}/Epigrass/__init__.pyc
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${PYSITELIB}/Epigrass/__init__.pyo
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${PYSITELIB}/Epigrass/__version__.py
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${PYSITELIB}/Epigrass/__version__.pyc
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${PYSITELIB}/Epigrass/__version__.pyo
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${PYSITELIB}/Epigrass/about.py
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${PYSITELIB}/Epigrass/about.pyc
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${PYSITELIB}/Epigrass/about.pyo
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${PYSITELIB}/Epigrass/cpanel.py
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${PYSITELIB}/Epigrass/cpanel.pyc
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${PYSITELIB}/Epigrass/cpanel.pyo
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${PYSITELIB}/Epigrass/dataObject.py
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${PYSITELIB}/Epigrass/dataObject.pyc
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${PYSITELIB}/Epigrass/dataObject.pyo
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${PYSITELIB}/Epigrass/data_io.py
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${PYSITELIB}/Epigrass/data_io.pyc
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${PYSITELIB}/Epigrass/data_io.pyo
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${PYSITELIB}/Epigrass/dgraph.py
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${PYSITELIB}/Epigrass/dgraph.pyc
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${PYSITELIB}/Epigrass/dgraph.pyo
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${PYSITELIB}/Epigrass/display.ui
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${PYSITELIB}/Epigrass/egicon.png
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${PYSITELIB}/Epigrass/elasticnodes.py
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${PYSITELIB}/Epigrass/elasticnodes.pyc
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${PYSITELIB}/Epigrass/elasticnodes.pyo
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${PYSITELIB}/Epigrass/epgeditor.py
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${PYSITELIB}/Epigrass/epgeditor.pyc
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${PYSITELIB}/Epigrass/epgeditor.pyo
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${PYSITELIB}/Epigrass/epiRTplay.py
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${PYSITELIB}/Epigrass/epiRTplay.pyc
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${PYSITELIB}/Epigrass/epiRTplay.pyo
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${PYSITELIB}/Epigrass/epigdal.py
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${PYSITELIB}/Epigrass/epigdal.pyc
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${PYSITELIB}/Epigrass/epigdal.pyo
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${PYSITELIB}/Epigrass/epigrass.py
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${PYSITELIB}/Epigrass/epigrass.pyc
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${PYSITELIB}/Epigrass/epigrass.pyo
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${PYSITELIB}/Epigrass/epigrass.qrc
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${PYSITELIB}/Epigrass/epigrass_es.qm
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${PYSITELIB}/Epigrass/epigrass_es.ts
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${PYSITELIB}/Epigrass/epigrass_fr.qm
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${PYSITELIB}/Epigrass/epigrass_fr.ts
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${PYSITELIB}/Epigrass/epigrass_rc.py
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${PYSITELIB}/Epigrass/epigrass_rc.pyc
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${PYSITELIB}/Epigrass/epigrass_rc.pyo
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${PYSITELIB}/Epigrass/epigrass_ru_RU.qm
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${PYSITELIB}/Epigrass/epigrass_ru_RU.ts
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${PYSITELIB}/Epigrass/epimodels.py
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${PYSITELIB}/Epigrass/epimodels.pyc
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${PYSITELIB}/Epigrass/epimodels.pyo
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${PYSITELIB}/Epigrass/epiplay.py
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${PYSITELIB}/Epigrass/epiplay.pyc
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${PYSITELIB}/Epigrass/epiplay.pyo
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${PYSITELIB}/Epigrass/manager.py
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${PYSITELIB}/Epigrass/manager.pyc
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${PYSITELIB}/Epigrass/manager.pyo
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${PYSITELIB}/Epigrass/manager_pt_BR.qm
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${PYSITELIB}/Epigrass/manager_pt_BR.ts
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${PYSITELIB}/Epigrass/neteditor.py
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${PYSITELIB}/Epigrass/neteditor.pyc
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${PYSITELIB}/Epigrass/neteditor.pyo
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${PYSITELIB}/Epigrass/neteditor.ui
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${PYSITELIB}/Epigrass/primitives.py
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${PYSITELIB}/Epigrass/primitives.pyc
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${PYSITELIB}/Epigrass/primitives.pyo
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${PYSITELIB}/Epigrass/pylabQtcanvas.py
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${PYSITELIB}/Epigrass/pylabQtcanvas.pyc
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${PYSITELIB}/Epigrass/pylabQtcanvas.pyo
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${PYSITELIB}/Epigrass/qtgraph.py
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${PYSITELIB}/Epigrass/qtgraph.pyc
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${PYSITELIB}/Epigrass/qtgraph.pyo
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${PYSITELIB}/Epigrass/report.py
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${PYSITELIB}/Epigrass/report.pyc
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${PYSITELIB}/Epigrass/report.pyo
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${PYSITELIB}/Epigrass/rinterface.py
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${PYSITELIB}/Epigrass/rinterface.pyc
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${PYSITELIB}/Epigrass/rinterface.pyo
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${PYSITELIB}/Epigrass/simobj.py
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${PYSITELIB}/Epigrass/simobj.pyc
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${PYSITELIB}/Epigrass/simobj.pyo
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${PYSITELIB}/Epigrass/spread.py
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${PYSITELIB}/Epigrass/spread.pyc
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${PYSITELIB}/Epigrass/spread.pyo
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${PYSITELIB}/${EGG_INFODIR}/PKG-INFO
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${PYSITELIB}/${EGG_INFODIR}/SOURCES.txt
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${PYSITELIB}/${EGG_INFODIR}/dependency_links.txt
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${PYSITELIB}/${EGG_INFODIR}/entry_points.txt
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${PYSITELIB}/${EGG_INFODIR}/requires.txt
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${PYSITELIB}/${EGG_INFODIR}/top_level.txt
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share/applications/epigrass.desktop
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share/doc/epigrass/Epigrass.pdf
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share/doc/epigrass/demos/CustomModel.py
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share/doc/epigrass/demos/CustomModel_example.py
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share/doc/epigrass/demos/edges.csv
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share/doc/epigrass/demos/edgesout.csv
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share/doc/epigrass/demos/flu.epg
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share/doc/epigrass/demos/mesh.csv
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share/doc/epigrass/demos/mesh.epg
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share/doc/epigrass/demos/nodes.csv
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share/doc/epigrass/demos/rio.epg
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share/doc/epigrass/demos/riozonas_LatLong.dbf
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share/doc/epigrass/demos/riozonas_LatLong.shp
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share/doc/epigrass/demos/riozonas_LatLong.shx
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share/doc/epigrass/demos/sars.epg
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share/doc/epigrass/demos/script.epg
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share/doc/epigrass/demos/sites.csv
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share/doc/epigrass/demos/sitios2.csv
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share/doc/epigrass/demos/sitios3.csv
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share/doc/epigrass/demos/star.csv
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share/doc/epigrass/demos/star.epg
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share/pixmaps/egicon.png
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6
py-epigrass/distinfo
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py-epigrass/distinfo
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$NetBSD: distinfo,v 1.1 2013/09/07 19:53:40 jihbed Exp $
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SHA1 (epigrass-2.3.1.tar.gz) = 41156cd4839cd2f25bb51fbb1b741d3e1a5cfd8b
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RMD160 (epigrass-2.3.1.tar.gz) = 16531502b82f12cb6060df1c6329a0b6a189e7da
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Size (epigrass-2.3.1.tar.gz) = 2114583 bytes
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SHA1 (patch-setup.py) = dc9faa20d8339db50f057320e6d033c1bb01d109
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27
py-epigrass/patches/patch-setup.py
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py-epigrass/patches/patch-setup.py
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$NetBSD: patch-setup.py,v 1.1 2013/09/07 19:53:40 jihbed Exp $
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--- setup.py.orig 2013-06-16 19:55:08.000000000 +0000
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+++ setup.py 2013-09-07 16:22:08.000000000 +0000
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@@ -1,5 +1,6 @@
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# -*- coding:utf8 -*-
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import ez_setup
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+import sys
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ez_setup.use_setuptools()
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from setuptools import setup
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from glob import glob
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@@ -31,12 +32,12 @@
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],
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'gui_scripts': [
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'epigrass = Epigrass.epigrass:main',
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- 'epgeditor= Epigrass.epgeditor:main',
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- 'neteditor= Epigrass.neteditor:main'
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+ 'epgeditor = Epigrass.epgeditor:main',
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+ 'neteditor = Epigrass.neteditor:main'
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]
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},
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include_package_data = True,
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package_data = {'':['INSTALL','README','COPYING','epigrass.desktop','*.rst','*.tex','*.png','*.jpg']},
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- #data_files = [('/usr/share/pixmaps',['egicon.png']),('/usr/share/doc/epigrass/demos',demos),('/usr/share/doc/epigrass/',['docs/build/latex/Epigrass.pdf']),('/usr/share/applications',['epigrass.desktop'])]
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+ data_files = [('/usr/pkg/share/pixmaps',['egicon.png']),('/usr/pkg/share/doc/epigrass/demos',demos),('/usr/pkg/share/doc/epigrass/',['docs/build/latex/Epigrass.pdf']),('/usr/pkg/share/applications',['epigrass.desktop'])]
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)
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