@comment $NetBSD: PLIST,v 1.1.1.1 2005/02/25 20:27:56 daprice Exp $
libexec/cgi-bin/AssignLoci.cgi
libexec/cgi-bin/BER_hypo_display.cgi
libexec/cgi-bin/BacAnnotationPage.cgi
libexec/cgi-bin/Manatee/DBmodel_to_geneobj.pm
libexec/cgi-bin/Manatee/EukManateeDB.pm
libexec/cgi-bin/Manatee/Gene_obj.pm
libexec/cgi-bin/Manatee/GetManateeParameters.pm
libexec/cgi-bin/Manatee/GetManateeTemplate.pm
libexec/cgi-bin/Manatee/GetManateeURLs.pm
libexec/cgi-bin/Manatee/MysqlEukManateeDB.pm
libexec/cgi-bin/Manatee/MysqlProkManateeDB.pm
libexec/cgi-bin/Manatee/Nuc_translator.pm
libexec/cgi-bin/Manatee/ProkManateeDB.pm
libexec/cgi-bin/Manatee/SybaseEukManateeDB.pm
libexec/cgi-bin/Manatee/SybaseProkManateeDB.pm
libexec/cgi-bin/Manatee/Yap.pm
libexec/cgi-bin/RegionView.cgi
libexec/cgi-bin/TE_creator.cgi
libexec/cgi-bin/ViewFrameSeq.cgi
libexec/cgi-bin/align_display.cgi
libexec/cgi-bin/ann_tools.cgi
libexec/cgi-bin/annotation_notebook.cgi
libexec/cgi-bin/attribute_display.cgi
libexec/cgi-bin/batch_assignments.cgi
libexec/cgi-bin/bldScale.cgi
libexec/cgi-bin/conf/Manatee.conf
libexec/cgi-bin/conf/Manatee.conf.demo
libexec/cgi-bin/conf/Manatee.conf.e2k1
libexec/cgi-bin/conf/Manatee.conf.e2k1.ext
libexec/cgi-bin/conf/Manatee.conf.ext
libexec/cgi-bin/conf/Manatee.conf.install
libexec/cgi-bin/conf/README
libexec/cgi-bin/conf/RegionView.conf
libexec/cgi-bin/consistency_checks.cgi
libexec/cgi-bin/consistency_checks/AFSAPM_atttype.cgi
libexec/cgi-bin/consistency_checks/CHP_CDP_DEG_gs_ec_notnull.cgi
libexec/cgi-bin/consistency_checks/ORFS_go_role_link_not_ident.cgi
libexec/cgi-bin/consistency_checks/ORFS_with_BOGUS_GO_IDs.cgi
libexec/cgi-bin/consistency_checks/ORF_attrib_not_feat_score.cgi
libexec/cgi-bin/consistency_checks/ORF_attribute_not_asm_feature.cgi
libexec/cgi-bin/consistency_checks/ORFs_go_role_link_NOT_go_evidence.cgi
libexec/cgi-bin/consistency_checks/ORFs_in_ident_NOT_go_role_link.cgi
libexec/cgi-bin/consistency_checks/afsapm_AFSAPM.cgi
libexec/cgi-bin/consistency_checks/asm_feat_not_ident.cgi
libexec/cgi-bin/consistency_checks/asm_feat_rows_asmbl_id_not_in_assembly.cgi
libexec/cgi-bin/consistency_checks/asm_feature_not_ORF_attribute.cgi
libexec/cgi-bin/consistency_checks/asm_feature_not_evidence_not_hypo.cgi
libexec/cgi-bin/consistency_checks/asm_feature_not_role_link_not_hypo.cgi
libexec/cgi-bin/consistency_checks/att_types.cgi
libexec/cgi-bin/consistency_checks/autoannotate_no_equivalog_hit.cgi
libexec/cgi-bin/consistency_checks/bad_ident_locus_start.cgi
libexec/cgi-bin/consistency_checks/consistency_checks.conf
libexec/cgi-bin/consistency_checks/divide_3.cgi
libexec/cgi-bin/consistency_checks/duplicate_gene_syms.cgi
libexec/cgi-bin/consistency_checks/equivalogs_more_than_one_hit.cgi
libexec/cgi-bin/consistency_checks/evidence_not_asm_feature.cgi
libexec/cgi-bin/consistency_checks/evidence_not_feat_score.cgi
libexec/cgi-bin/consistency_checks/family_protein_gene_sym_not_null.cgi
libexec/cgi-bin/consistency_checks/feat_score_not_ORFattrib_evidence.cgi
libexec/cgi-bin/consistency_checks/frame_shifts.cgi
libexec/cgi-bin/consistency_checks/fs_align_display.cgi
libexec/cgi-bin/consistency_checks/function_not_process.cgi
libexec/cgi-bin/consistency_checks/gram_pos_com_name_periplasm.cgi
libexec/cgi-bin/consistency_checks/gram_pos_incorrect_go_id.cgi
libexec/cgi-bin/consistency_checks/hypothetical_proteins_in_GRL.cgi
libexec/cgi-bin/consistency_checks/hypotheticals_with_bad_roles.cgi
libexec/cgi-bin/consistency_checks/ident_locus_null.cgi
libexec/cgi-bin/consistency_checks/ident_not_asm_feat.cgi
libexec/cgi-bin/consistency_checks/lingering_FS_PM_com_names.cgi
libexec/cgi-bin/consistency_checks/no_roles.cgi
libexec/cgi-bin/consistency_checks/no_start_edit.cgi
libexec/cgi-bin/consistency_checks/no_trans_stops.cgi
libexec/cgi-bin/consistency_checks/non_microbial_roles.cgi
libexec/cgi-bin/consistency_checks/noseq_asmfeat.cgi
libexec/cgi-bin/consistency_checks/not_complete_post_fs_reports.cgi
libexec/cgi-bin/consistency_checks/not_complete_pre_fs_report.cgi
libexec/cgi-bin/consistency_checks/odd_starts.cgi
libexec/cgi-bin/consistency_checks/odd_stops.cgi
libexec/cgi-bin/consistency_checks/point_mutation.cgi
libexec/cgi-bin/consistency_checks/process_not_function.cgi
libexec/cgi-bin/consistency_checks/putative_gene_sym_ec_not_null.cgi
libexec/cgi-bin/consistency_checks/readme
libexec/cgi-bin/consistency_checks/role_link_not_in_asm_feature.cgi
libexec/cgi-bin/consistency_checks/role_link_not_in_ident.cgi
libexec/cgi-bin/consistency_checks/rows_go_evidence_not_go_role_link.cgi
libexec/cgi-bin/consistency_checks/same_name_different_role.cgi
libexec/cgi-bin/consistency_checks/screwy_idents.cgi
libexec/cgi-bin/consistency_checks/six_caps_com_name.cgi
libexec/cgi-bin/consistency_checks/test.cgi
libexec/cgi-bin/consistency_checks/unknown_general_bad_roles.cgi
libexec/cgi-bin/custom_blastreport.cgi
libexec/cgi-bin/euk_display.cgi
libexec/cgi-bin/evidence_display.cgi
libexec/cgi-bin/frameshift/fs_create.cgi
libexec/cgi-bin/frameshift/fs_list.cgi
libexec/cgi-bin/frameshift/fs_report.cgi
libexec/cgi-bin/frameshift/fs_short_list.cgi
libexec/cgi-bin/frameshift/fs_verify.cgi
libexec/cgi-bin/frameshift/labinfo_load.cgi
libexec/cgi-bin/gen_sum.cgi
libexec/cgi-bin/genelist_display.cgi
libexec/cgi-bin/general_query.cgi
libexec/cgi-bin/genome_summary.cgi
libexec/cgi-bin/getParalogsSeq.cgi
libexec/cgi-bin/help/contactBA.cgi
libexec/cgi-bin/help/help.cgi
libexec/cgi-bin/help/role_help.cgi
libexec/cgi-bin/hmms.cgi
libexec/cgi-bin/ir_report.cgi
libexec/cgi-bin/js/orf_infopage.js
libexec/cgi-bin/listchromosomes.cgi
libexec/cgi-bin/listmolecules.cgi
libexec/cgi-bin/membrane_prots.cgi
libexec/cgi-bin/multiple_model_comparison_pic.cgi
libexec/cgi-bin/overlap_display.cgi
libexec/cgi-bin/parafamsbydomain.cgi
libexec/cgi-bin/paralog_display.cgi
libexec/cgi-bin/paralogs.cgi
libexec/cgi-bin/paralogs/draw_percent_bar.cgi
libexec/cgi-bin/paralogs/drawbar.cgi
libexec/cgi-bin/paralogs/get_family.cgi
libexec/cgi-bin/paralogs/show_ali.cgi
libexec/cgi-bin/paralogs/show_all_families.cgi
libexec/cgi-bin/paralogs/show_dom_cov.cgi
libexec/cgi-bin/paralogs/show_domfam.cgi
libexec/cgi-bin/paralogs/show_profam.cgi
libexec/cgi-bin/project_status.cgi
libexec/cgi-bin/psipred_viewer.cgi
libexec/cgi-bin/refresh_searches.cgi
libexec/cgi-bin/searchpage.cgi
libexec/cgi-bin/shared/Coati/BulkHelper.pm
libexec/cgi-bin/shared/Coati/BulkPostgresHelper.pm
libexec/cgi-bin/shared/Coati/BulkSybaseHelper.pm
libexec/cgi-bin/shared/Coati/Cache/Data.pm
libexec/cgi-bin/shared/Coati/Coati.pm
libexec/cgi-bin/shared/Coati/Coati/BulkPostgresChadoCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/BulkSybaseChadoCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/BulkSybaseOmniumCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/BulkSybaseProkCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/ChadoCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/CoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/CoatiXML.pm
libexec/cgi-bin/shared/Coati/Coati/ERCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/EukCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/MysqlChadoCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/MysqlERCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/MysqlEukCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/MysqlOmniumCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/MysqlProkCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/MysqlSyntenyCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/OmniumCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/PostgresChadoCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/PostgresEukCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/PostgresOmniumCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/PostgresProkCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/ProkCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/SybaseChadoCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/SybaseERCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/SybaseEukCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/SybaseOmniumCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/SybaseProkCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/SybaseSyntenyCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/SyntenyCoatiDB.pm
libexec/cgi-bin/shared/Coati/Coati/commonsql.xml
libexec/cgi-bin/shared/Coati/Evidence.pm
libexec/cgi-bin/shared/Coati/Evidence/EREvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/EukEvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/EvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/EvidenceXML.pm
libexec/cgi-bin/shared/Coati/Evidence/MREvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/MysqlEREvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/MysqlEukEvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/MysqlMREvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/MysqlProkEvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/MysqlSyntenyEvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/ProkEvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/SybaseEREvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/SybaseEukEvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/SybaseMREvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/SybaseProkEvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/SybaseSyntenyEvidenceDB.pm
libexec/cgi-bin/shared/Coati/Evidence/SyntenyEvidenceDB.pm
libexec/cgi-bin/shared/Coati/GO_tree_storable.pm
libexec/cgi-bin/shared/Coati/Logger.pm
libexec/cgi-bin/shared/Coati/ModulesFactory.pm
libexec/cgi-bin/shared/Coati/MysqlHelper.pm
libexec/cgi-bin/shared/Coati/PostgresHelper.pm
libexec/cgi-bin/shared/Coati/Sorters.pm
libexec/cgi-bin/shared/Coati/SybaseHelper.pm
libexec/cgi-bin/shared/Coati/TableIDManager.pm
libexec/cgi-bin/shared/Coati/Test.pm
libexec/cgi-bin/shared/Coati/Test/Html.pm
libexec/cgi-bin/shared/Coati/Test/Mysql.pm
libexec/cgi-bin/shared/Coati/Test/Sybase.pm
libexec/cgi-bin/shared/Coati/Web/MyDataDumper.pm
libexec/cgi-bin/shared/Coati/Web/Parameters.pm
libexec/cgi-bin/shared/Coati/Web/Template.pm
libexec/cgi-bin/shared/Coati/Web/URL.pm
libexec/cgi-bin/shared/EvidencePicture.cgi
libexec/cgi-bin/shared/GCDisplay.cgi
libexec/cgi-bin/shared/GC_Skew_display.cgi
libexec/cgi-bin/shared/Manatee.pm
libexec/cgi-bin/shared/Manatee/Draw_seq_match_image.pm
libexec/cgi-bin/shared/Manatee/GO_SLIM.pm
libexec/cgi-bin/shared/Manatee/ManateeDB.pm
libexec/cgi-bin/shared/Manatee/ManateeFactory.pm
libexec/cgi-bin/shared/Manatee/Matchmatrix.pm
libexec/cgi-bin/shared/Manatee/Sequence_coords_image.pm
libexec/cgi-bin/shared/Manatee/Stacker.pm
libexec/cgi-bin/shared/Manatee/Transposable_element_obj.pm
libexec/cgi-bin/shared/ORF_infopage.cgi
libexec/cgi-bin/shared/README
libexec/cgi-bin/shared/addGOEvd.cgi
libexec/cgi-bin/shared/btab_display.cgi
libexec/cgi-bin/shared/clear_cache.cgi
libexec/cgi-bin/shared/delete.cgi
libexec/cgi-bin/shared/draw_seq_match_image.cgi
libexec/cgi-bin/shared/edit_go_id.cgi
libexec/cgi-bin/shared/gateway.cgi
libexec/cgi-bin/shared/go_cgi/add_ontology_id.cgi
libexec/cgi-bin/shared/go_cgi/create_ontology_link.cgi
libexec/cgi-bin/shared/go_cgi/edit_ontology.cgi
libexec/cgi-bin/shared/go_cgi/generate_ontology.cgi
libexec/cgi-bin/shared/go_cgi/go_com_name_search.cgi
libexec/cgi-bin/shared/go_cgi/go_correlations.cgi
libexec/cgi-bin/shared/go_cgi/go_gene_display.cgi
libexec/cgi-bin/shared/go_cgi/go_key_search.cgi
libexec/cgi-bin/shared/go_cgi/go_keyword_search.cgi
libexec/cgi-bin/shared/go_cgi/go_slim/delete_go_slim.pl
libexec/cgi-bin/shared/go_cgi/go_slim/load_go_slim.pl
libexec/cgi-bin/shared/go_cgi/replace_ti.cgi
libexec/cgi-bin/shared/go_cgi/show_go_tree.cgi
libexec/cgi-bin/shared/go_cgi/test_go_tree.cgi
libexec/cgi-bin/shared/go_cgi/ti_status.cgi
libexec/cgi-bin/shared/go_cgi/update_ontology_term.cgi
libexec/cgi-bin/shared/graphic_library.cgi
libexec/cgi-bin/shared/hmm_align_display.cgi
libexec/cgi-bin/shared/hmm_inter_link.cgi
libexec/cgi-bin/shared/hmm_orf_report.cgi
libexec/cgi-bin/shared/hmm_report.cgi
libexec/cgi-bin/shared/hmm_vs_all_db.cgi
libexec/cgi-bin/shared/interpro_funcs.cgi
libexec/cgi-bin/shared/iprs.cgi
libexec/cgi-bin/shared/js/orf_infopage.js
libexec/cgi-bin/shared/list_interpro.cgi
libexec/cgi-bin/shared/listparafams.cgi
libexec/cgi-bin/shared/login.cgi
libexec/cgi-bin/shared/multi_align.cgi
libexec/cgi-bin/shared/peffect_functions.cgi
libexec/cgi-bin/shared/print_role_notes.cgi
libexec/cgi-bin/shared/repeat_viewer.cgi
libexec/cgi-bin/shared/role_info.cgi
libexec/cgi-bin/shared/run_belvu.cgi
libexec/cgi-bin/shared/seg_display.cgi
libexec/cgi-bin/shared/seq_display.cgi
libexec/cgi-bin/shared/show_all_hmms.cgi
libexec/cgi-bin/shared/show_help.cgi
libexec/cgi-bin/shared/show_history.cgi
libexec/cgi-bin/shared/show_png.cgi
libexec/cgi-bin/shared/sigp_display.cgi
libexec/cgi-bin/shared/spawn_help.cgi
libexec/cgi-bin/shared/submit_feats.cgi
libexec/cgi-bin/shared/templates/btab_display.tt
libexec/cgi-bin/shared/templates/characterized.tt
libexec/cgi-bin/shared/templates/docs/ORFinfo_page_help.html
libexec/cgi-bin/shared/templates/docs/btab_display.html
libexec/cgi-bin/shared/templates/docs/btab_display.txt
libexec/cgi-bin/shared/templates/docs/gc_skew_display.html
libexec/cgi-bin/shared/templates/docs/gc_skew_display.txt
libexec/cgi-bin/shared/templates/docs/gcdisplay.html
libexec/cgi-bin/shared/templates/docs/gcdisplay.txt
libexec/cgi-bin/shared/templates/docs/general_error_page.txt
libexec/cgi-bin/shared/templates/docs/go_com_name_search.html
libexec/cgi-bin/shared/templates/docs/go_com_name_search.txt
libexec/cgi-bin/shared/templates/docs/go_correlations.html
libexec/cgi-bin/shared/templates/docs/go_correlations.txt
libexec/cgi-bin/shared/templates/docs/go_gene_display.html
libexec/cgi-bin/shared/templates/docs/go_gene_display.txt
libexec/cgi-bin/shared/templates/docs/go_key_search.html
libexec/cgi-bin/shared/templates/docs/go_key_search.txt
libexec/cgi-bin/shared/templates/docs/go_keyword_search.html
libexec/cgi-bin/shared/templates/docs/go_keyword_search.txt
libexec/cgi-bin/shared/templates/docs/go_tree.html
libexec/cgi-bin/shared/templates/docs/go_tree.txt
libexec/cgi-bin/shared/templates/docs/hmm_align_display.html
libexec/cgi-bin/shared/templates/docs/hmm_align_display.txt
libexec/cgi-bin/shared/templates/docs/hmm_inter_link.html
libexec/cgi-bin/shared/templates/docs/hmm_inter_link.txt
libexec/cgi-bin/shared/templates/docs/hmm_orf_report.html
libexec/cgi-bin/shared/templates/docs/hmm_orf_report.txt
libexec/cgi-bin/shared/templates/docs/hmm_report.html
libexec/cgi-bin/shared/templates/docs/hmm_report.txt
libexec/cgi-bin/shared/templates/docs/hmm_vs_all_db.html
libexec/cgi-bin/shared/templates/docs/hmm_vs_all_db.txt
libexec/cgi-bin/shared/templates/docs/invalid_orf_error_page.txt
libexec/cgi-bin/shared/templates/docs/iprs.html
libexec/cgi-bin/shared/templates/docs/iprs.txt
libexec/cgi-bin/shared/templates/docs/list_interpro.html
libexec/cgi-bin/shared/templates/docs/list_interpro.txt
libexec/cgi-bin/shared/templates/docs/listparafams.html
libexec/cgi-bin/shared/templates/docs/listparafams.txt
libexec/cgi-bin/shared/templates/docs/orf_infohelp.html
libexec/cgi-bin/shared/templates/docs/refresh_hmm.html
libexec/cgi-bin/shared/templates/docs/refresh_hmm.txt
libexec/cgi-bin/shared/templates/docs/replace_ti.html
libexec/cgi-bin/shared/templates/docs/replace_ti.txt
libexec/cgi-bin/shared/templates/docs/role_info.html
libexec/cgi-bin/shared/templates/docs/role_info.txt
libexec/cgi-bin/shared/templates/docs/seg_display.html
libexec/cgi-bin/shared/templates/docs/seg_display.txt
libexec/cgi-bin/shared/templates/docs/seq_display.html
libexec/cgi-bin/shared/templates/docs/seq_display.txt
libexec/cgi-bin/shared/templates/docs/show_all_hmms.html
libexec/cgi-bin/shared/templates/docs/show_all_hmms.txt
libexec/cgi-bin/shared/templates/docs/show_go_tree.html
libexec/cgi-bin/shared/templates/docs/show_go_tree.txt
libexec/cgi-bin/shared/templates/docs/show_help.txt
libexec/cgi-bin/shared/templates/docs/sigp_display.html
libexec/cgi-bin/shared/templates/docs/sigp_display.txt
libexec/cgi-bin/shared/templates/docs/specific_error_page.txt
libexec/cgi-bin/shared/templates/docs/submit_feats.html
libexec/cgi-bin/shared/templates/docs/submit_feats.txt
libexec/cgi-bin/shared/templates/docs/ti_status.html
libexec/cgi-bin/shared/templates/docs/ti_status.txt
libexec/cgi-bin/shared/templates/edit_go_id.tt
libexec/cgi-bin/shared/templates/evidence_history.tt
libexec/cgi-bin/shared/templates/footer.tt
libexec/cgi-bin/shared/templates/gc_skew_display.tt
libexec/cgi-bin/shared/templates/gcdisplay.tt
libexec/cgi-bin/shared/templates/general_error_page.tt
libexec/cgi-bin/shared/templates/go_com_name_search.tt
libexec/cgi-bin/shared/templates/go_correlations.tt
libexec/cgi-bin/shared/templates/go_gene_display.tt
libexec/cgi-bin/shared/templates/go_key_search.tt
libexec/cgi-bin/shared/templates/go_keyword_search.tt
libexec/cgi-bin/shared/templates/go_list.tt
libexec/cgi-bin/shared/templates/go_tree.tt
libexec/cgi-bin/shared/templates/header.devel
libexec/cgi-bin/shared/templates/header.tt
libexec/cgi-bin/shared/templates/hmm_align_display.tt
libexec/cgi-bin/shared/templates/hmm_hits.tt
libexec/cgi-bin/shared/templates/hmm_inter_link.tt
libexec/cgi-bin/shared/templates/hmm_orf_report.tt
libexec/cgi-bin/shared/templates/hmm_report.tt
libexec/cgi-bin/shared/templates/hmm_vs_all_db.tt
libexec/cgi-bin/shared/templates/ident_history.tt
libexec/cgi-bin/shared/templates/invalid_orf_error_page.tt
libexec/cgi-bin/shared/templates/iprs.tt
libexec/cgi-bin/shared/templates/list_interpro.tt
libexec/cgi-bin/shared/templates/listparafams.tt
libexec/cgi-bin/shared/templates/login.tt
libexec/cgi-bin/shared/templates/print_role_notes.tt
libexec/cgi-bin/shared/templates/prosite.tt
libexec/cgi-bin/shared/templates/redirect.tt
libexec/cgi-bin/shared/templates/refresh_hmm.tt
libexec/cgi-bin/shared/templates/replace_ti.tt
libexec/cgi-bin/shared/templates/role_history.tt
libexec/cgi-bin/shared/templates/role_info.tt
libexec/cgi-bin/shared/templates/seg_display.tt
libexec/cgi-bin/shared/templates/seq_display.tt
libexec/cgi-bin/shared/templates/show_all_hmms.tt
libexec/cgi-bin/shared/templates/show_go_tree.tt
libexec/cgi-bin/shared/templates/show_help.tt
libexec/cgi-bin/shared/templates/signalp.tt
libexec/cgi-bin/shared/templates/sigp_display.tt
libexec/cgi-bin/shared/templates/specific_error_page.tt
libexec/cgi-bin/shared/templates/submit_feats.tt
libexec/cgi-bin/shared/templates/ti_status.tt
libexec/cgi-bin/shared/templates/tmhmm.tt
libexec/cgi-bin/shared/templates/wait.tt
libexec/cgi-bin/shared/tmhmm.cgi
libexec/cgi-bin/shared/updateTables.cgi
libexec/cgi-bin/shared/urls/urls_external.xml
libexec/cgi-bin/shared/urls/urls_shared.xml
libexec/cgi-bin/shared/urls/urls_shared.xml.demo
libexec/cgi-bin/shared/urls/urls_shared_internal.xml
libexec/cgi-bin/shared/urls/urls_shared_internal.xml.demo
libexec/cgi-bin/shared/urls/urls_shared_internal.xml.export
libexec/cgi-bin/show_go_suggestions.cgi
libexec/cgi-bin/show_para.cgi
libexec/cgi-bin/show_skim.cgi
libexec/cgi-bin/showtilingpath.cgi
libexec/cgi-bin/sigP_ges_query.cgi
libexec/cgi-bin/submit_begin_all.cgi
libexec/cgi-bin/submit_begin_query.cgi
libexec/cgi-bin/submit_frag_display.cgi
libexec/cgi-bin/submit_library.cgi
libexec/cgi-bin/summary/admin_info.cgi
libexec/cgi-bin/summary/display_feature.cgi
libexec/cgi-bin/summary/existing_project_update.cgi
libexec/cgi-bin/summary/roleid_breakdown.cgi
libexec/cgi-bin/summary/skew_display.cgi
libexec/cgi-bin/summary/skew_table.cgi
libexec/cgi-bin/summary/summary_page.cgi
libexec/cgi-bin/summary/view_notebook.cgi
libexec/cgi-bin/templates/admin_info.tt
libexec/cgi-bin/templates/align_display.tt
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libexec/cgi-bin/templates/docs/lingering_FS_PM_com_names.html
libexec/cgi-bin/templates/docs/listmolecules.html
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libexec/cgi-bin/templates/docs/load_subst.html
libexec/cgi-bin/templates/docs/login.html
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libexec/cgi-bin/templates/docs/membrane_prots.html
libexec/cgi-bin/templates/docs/membrane_prots.txt
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libexec/cgi-bin/templates/docs/no_start_edit.html
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libexec/cgi-bin/templates/docs/non_microbial_roles.html
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libexec/cgi-bin/templates/docs/overlap_display.html
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libexec/cgi-bin/templates/docs/paralogs.txt
libexec/cgi-bin/templates/docs/point_mutation.html
libexec/cgi-bin/templates/docs/project_status.html
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libexec/cgi-bin/templates/docs/psipred_viewer.txt
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libexec/cgi-bin/templates/docs/refresh_searches.html
libexec/cgi-bin/templates/docs/refresh_searches.txt
libexec/cgi-bin/templates/docs/region_view.html
libexec/cgi-bin/templates/docs/region_view.txt
libexec/cgi-bin/templates/docs/repeat_viewer.html
libexec/cgi-bin/templates/docs/repeat_viewer.txt
libexec/cgi-bin/templates/docs/role_help.html
libexec/cgi-bin/templates/docs/role_help.txt
libexec/cgi-bin/templates/docs/role_link_not_in_asm_feature.html
libexec/cgi-bin/templates/docs/role_link_not_in_ident.html
libexec/cgi-bin/templates/docs/roleid_breakdown.html
libexec/cgi-bin/templates/docs/roleid_breakdown.txt
libexec/cgi-bin/templates/docs/same_name_different_role.html
libexec/cgi-bin/templates/docs/screwy_ident.html
libexec/cgi-bin/templates/docs/screwy_idents.html
libexec/cgi-bin/templates/docs/show_para.html
libexec/cgi-bin/templates/docs/show_para.txt
libexec/cgi-bin/templates/docs/sigp_display.html
libexec/cgi-bin/templates/docs/sigp_display.txt
libexec/cgi-bin/templates/docs/sigp_ges_query.html
libexec/cgi-bin/templates/docs/sigp_ges_query.txt
libexec/cgi-bin/templates/docs/six_caps_com_name.html
libexec/cgi-bin/templates/docs/skew_display.html
libexec/cgi-bin/templates/docs/skew_display.txt
libexec/cgi-bin/templates/docs/skew_table.html
libexec/cgi-bin/templates/docs/skew_table.txt
libexec/cgi-bin/templates/docs/submit_begin_all.html
libexec/cgi-bin/templates/docs/submit_begin_all.txt
libexec/cgi-bin/templates/docs/submit_begin_query.html
libexec/cgi-bin/templates/docs/submit_begin_query.txt
libexec/cgi-bin/templates/docs/summary_page.html
libexec/cgi-bin/templates/docs/summary_page.txt
libexec/cgi-bin/templates/docs/te_creator.html
libexec/cgi-bin/templates/docs/te_creator.txt
libexec/cgi-bin/templates/docs/unknown_general_bad_roles.html
libexec/cgi-bin/templates/docs/view_frame_seq.html
libexec/cgi-bin/templates/docs/view_frame_seq.txt
libexec/cgi-bin/templates/docs/view_notebook.html
libexec/cgi-bin/templates/docs/view_notebook.txt
libexec/cgi-bin/templates/euk_display.tt
libexec/cgi-bin/templates/evidence_display.tt
libexec/cgi-bin/templates/evidence_picture.tt
libexec/cgi-bin/templates/evidence_picture2.tt
libexec/cgi-bin/templates/existing_project_update.tt
libexec/cgi-bin/templates/footer.tt
libexec/cgi-bin/templates/frameshifts.tt
libexec/cgi-bin/templates/fs_create.tt
libexec/cgi-bin/templates/fs_list.tt
libexec/cgi-bin/templates/fs_report.tt
libexec/cgi-bin/templates/fs_short_list.tt
libexec/cgi-bin/templates/fs_verify.tt
libexec/cgi-bin/templates/gateway.tt
libexec/cgi-bin/templates/gen_sum.tt
libexec/cgi-bin/templates/genelist_display.tt
libexec/cgi-bin/templates/genome_summary.tt
libexec/cgi-bin/templates/get_family.tt
libexec/cgi-bin/templates/getparalogsseq.tt
libexec/cgi-bin/templates/go_role_info.tt
libexec/cgi-bin/templates/go_suggestions.tt
libexec/cgi-bin/templates/go_suggestions_main_page.tt
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libexec/cgi-bin/templates/help.tt
libexec/cgi-bin/templates/hmms.tt
libexec/cgi-bin/templates/ident.tt
libexec/cgi-bin/templates/ir_report.tt
libexec/cgi-bin/templates/labinfo_load.tt
libexec/cgi-bin/templates/listmolecules.tt
libexec/cgi-bin/templates/membrane_prots.tt
libexec/cgi-bin/templates/navigation_bar.tt
libexec/cgi-bin/templates/new_gene.tt
libexec/cgi-bin/templates/orf_info_header.ath1
libexec/cgi-bin/templates/orf_info_header.tt
libexec/cgi-bin/templates/orf_infopage.ath1
libexec/cgi-bin/templates/orf_infopage.demo
libexec/cgi-bin/templates/orf_infopage.tt
libexec/cgi-bin/templates/overlap_display.tt
libexec/cgi-bin/templates/parafamsbydomain.tt
libexec/cgi-bin/templates/paralog_display.tt
libexec/cgi-bin/templates/paralogs.tt
libexec/cgi-bin/templates/project_status.tt
libexec/cgi-bin/templates/psipred_viewer.tt
libexec/cgi-bin/templates/refresh_searches.tt
libexec/cgi-bin/templates/region_view.tt
libexec/cgi-bin/templates/repeat_viewer.tt
libexec/cgi-bin/templates/role_help.tt
libexec/cgi-bin/templates/role_link.tt
libexec/cgi-bin/templates/role_list.tt
libexec/cgi-bin/templates/roleid_breakdown.tt
libexec/cgi-bin/templates/searchpage.tt
libexec/cgi-bin/templates/showTree.tt
libexec/cgi-bin/templates/show_para.tt
libexec/cgi-bin/templates/show_skim_ber.tt
libexec/cgi-bin/templates/show_skim_blast.tt
libexec/cgi-bin/templates/showtilingimage.tt
libexec/cgi-bin/templates/showtilingpath.dd
libexec/cgi-bin/templates/showtilingpath.tt
libexec/cgi-bin/templates/sigp_ges_query.tt
libexec/cgi-bin/templates/skew_display.tt
libexec/cgi-bin/templates/skew_table.tt
libexec/cgi-bin/templates/status.tt
libexec/cgi-bin/templates/submit_begin_all.tt
libexec/cgi-bin/templates/submit_begin_query.tt
libexec/cgi-bin/templates/submit_page.tt
libexec/cgi-bin/templates/summary_page.tt
libexec/cgi-bin/templates/targetp.tt
libexec/cgi-bin/templates/te_creator.tt
libexec/cgi-bin/templates/tree.tt
libexec/cgi-bin/templates/tree_viewer.tt
libexec/cgi-bin/templates/treexml.tt
libexec/cgi-bin/templates/view_frame_seq.tt
libexec/cgi-bin/templates/view_notebook.tt
libexec/cgi-bin/tools/show_png.cgi
libexec/cgi-bin/tools/show_text.cgi
libexec/cgi-bin/tools/show_textgz.cgi
libexec/cgi-bin/tree_viewer.cgi
libexec/cgi-bin/trees/TreeDrawer.pm
libexec/cgi-bin/trees/TreeParse.pm
libexec/cgi-bin/trees/showTree.cgi
libexec/cgi-bin/trees/utility/alignmentToTree.cgi
libexec/cgi-bin/urls/urls_euk.xml
libexec/cgi-bin/urls/urls_euk.xml.demo
libexec/cgi-bin/urls/urls_euk_internal.xml
libexec/cgi-bin/urls/urls_euk_internal.xml.demo
libexec/cgi-bin/urls/urls_euk_internal.xml.export
libexec/cgi-bin/urls/urls_prok.xml
libexec/cgi-bin/urls/urls_prok.xml.demo
libexec/cgi-bin/urls/urls_prok_internal.xml
libexec/cgi-bin/urls/urls_prok_internal.xml.demo
libexec/cgi-bin/urls/urls_prok_internal.xml.export
libexec/cgi-bin/webblast/blast.pm
libexec/cgi-bin/webblast/hyperlink.pm
libexec/cgi-bin/webblast/webblastreport.cgi
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share/httpd/htdocs/tdb/contactBA.html
share/httpd/htdocs/tdb/e2k1orf_infopage.css
share/httpd/htdocs/tdb/finder.dat
share/httpd/htdocs/tdb/gateway.html
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@dirrm share/httpd/htdocs/tdb/js
@dirrm share/httpd/htdocs/tdb/images/orfinfopage
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@dirrm share/httpd/htdocs/tdb/images
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@dirrm libexec/cgi-bin/webblast
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@dirrm libexec/cgi-bin/shared/js
@dirrm libexec/cgi-bin/shared/go_cgi/go_slim
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@dirrm libexec/cgi-bin/shared/Manatee
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@dirrm libexec/cgi-bin/shared/Coati/Test
@dirrm libexec/cgi-bin/shared/Coati/Evidence
@dirrm libexec/cgi-bin/shared/Coati/Coati
@dirrm libexec/cgi-bin/shared/Coati/Cache
@dirrm libexec/cgi-bin/shared/Coati
@dirrm libexec/cgi-bin/shared
@dirrm libexec/cgi-bin/paralogs
@dirrm libexec/cgi-bin/js
@dirrm libexec/cgi-bin/help
@dirrm libexec/cgi-bin/frameshift
@dirrm libexec/cgi-bin/consistency_checks
@dirrm libexec/cgi-bin/conf
@dirrm libexec/cgi-bin/Manatee