@comment $NetBSD: PLIST,v 1.2 2005/10/08 21:51:29 rillig Exp $
bin/jemboss
share/EMBOSS/jemboss/LICENSE
share/EMBOSS/jemboss/README
share/EMBOSS/jemboss/api/allclasses-frame.html
share/EMBOSS/jemboss/api/deprecated-list.html
share/EMBOSS/jemboss/api/getClasses.pl
share/EMBOSS/jemboss/api/help-doc.html
share/EMBOSS/jemboss/api/index-all.html
share/EMBOSS/jemboss/api/index.html
share/EMBOSS/jemboss/api/makeDocs.csh
share/EMBOSS/jemboss/api/org/emboss/jemboss/Jemboss.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/Jemboss.winExit.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/JembossLogo.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/JembossParams.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/BuildProgramMenu.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/ResultsMenuBar.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/SetUpMenuBar.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/ShowResultSet.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/ShowSavedResults.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/SwingWorker.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/filetree/DragTree.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/filetree/FileEditorDisplay.PopupListener.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/filetree/FileEditorDisplay.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/filetree/FileNode.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/filetree/FileSaving.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/BuildJembossForm.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/JembossComboPopup.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/JembossComboPopup.myComboUI.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/ListFilePanel.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/SectionPanel.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/SetInFileCard.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/SetOutFileCard.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/TextFieldFloat.DecimalNumberDocument.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/TextFieldFloat.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/TextFieldInt.WholeNumberDocument.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/TextFieldInt.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form/TextFieldSink.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/CutNPasteTextArea.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/FileChooser.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/InputSequenceAttributes.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/SequenceFilter.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/sequenceChooser/TextAreaSink.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/startup/Database.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/startup/ProgList.HorizontalMenu.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/startup/ProgList.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/startup/Splash.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/parser/AcdFunResolve.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/parser/AcdVarResolve.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/parser/Ajax.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/parser/Dependent.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/parser/ParseAcd.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/parser/acd/ApplicationFields.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/parser/acd/ApplicationParam.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/programs/JembossProcess.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/programs/ListFile.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/programs/ResultList.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/programs/RunEmbossApplication.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/soap/AuthPopup.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/soap/CallAjax.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/soap/GetWossname.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/soap/JembossRun.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/soap/JembossSoapException.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/soap/PendingResults.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/soap/PrivateRequest.html
share/EMBOSS/jemboss/api/org/emboss/jemboss/soap/ResListView.html
share/EMBOSS/jemboss/api/overview-tree.html
share/EMBOSS/jemboss/api/package-list
share/EMBOSS/jemboss/api/packages.html
share/EMBOSS/jemboss/api/serialized-form.html
share/EMBOSS/jemboss/api/stylesheet.css
share/EMBOSS/jemboss/images/Backward_arrow_button.gif
share/EMBOSS/jemboss/images/Forward_arrow_button.gif
share/EMBOSS/jemboss/images/Go_button.gif
share/EMBOSS/jemboss/images/Information_button.gif
share/EMBOSS/jemboss/images/Jemboss_logo_greyback.gif
share/EMBOSS/jemboss/images/Jemboss_logo_large.gif
share/EMBOSS/jemboss/images/Jemboss_logo_small.gif
share/EMBOSS/jemboss/images/Job_manager_button.gif
share/EMBOSS/jemboss/images/Refresh_button.gif
share/EMBOSS/jemboss/images/Refresh_button2.gif
share/EMBOSS/jemboss/lib/JembossPrintAlignment.jar
share/EMBOSS/jemboss/lib/README
share/EMBOSS/jemboss/lib/activation.jar
share/EMBOSS/jemboss/lib/axis/axis-ant.jar
share/EMBOSS/jemboss/lib/axis/commons-discovery.jar
share/EMBOSS/jemboss/lib/axis/commons-logging.jar
share/EMBOSS/jemboss/lib/axis/jaxrpc.jar
share/EMBOSS/jemboss/lib/axis/log4j-1.2.8.jar
share/EMBOSS/jemboss/lib/axis/saaj.jar
share/EMBOSS/jemboss/lib/axis/wsdl4j.jar
share/EMBOSS/jemboss/lib/grout.jar
share/EMBOSS/jemboss/lib/jakarta-regexp-1.2.jar
share/EMBOSS/jemboss/lib/jalview.jar
share/EMBOSS/jemboss/lib/jcert.jar
share/EMBOSS/jemboss/lib/jnet.jar
share/EMBOSS/jemboss/lib/jsse.jar
share/EMBOSS/jemboss/lib/mail.jar
share/EMBOSS/jemboss/lib/xerces.jar
share/EMBOSS/jemboss/org/emboss/jemboss/Jemboss$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/Jemboss$winExit.class
share/EMBOSS/jemboss/org/emboss/jemboss/Jemboss.class
share/EMBOSS/jemboss/org/emboss/jemboss/Jemboss.java
share/EMBOSS/jemboss/org/emboss/jemboss/JembossJarUtil.class
share/EMBOSS/jemboss/org/emboss/jemboss/JembossJarUtil.java
share/EMBOSS/jemboss/org/emboss/jemboss/JembossLogo.java
share/EMBOSS/jemboss/org/emboss/jemboss/JembossParams.class
share/EMBOSS/jemboss/org/emboss/jemboss/JembossParams.java
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block$10.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block$8.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block$9.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Block.java
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$10.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$11.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$12.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$13.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$14.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$15.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$8.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw$9.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/DNADraw.java
share/EMBOSS/jemboss/org/emboss/jemboss/draw/EmbossCirdnaReader.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/EmbossCirdnaReader.java
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$10.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$11.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$12.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$8.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$9.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$ColorEditor.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$ColorRenderer.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker$MarkerTableModel.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/GeneticMarker.java
share/EMBOSS/jemboss/org/emboss/jemboss/draw/LineAttribute$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/LineAttribute$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/LineAttribute$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/LineAttribute$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/LineAttribute$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/LineAttribute$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/LineAttribute$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/LineAttribute.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/LineAttribute.java
share/EMBOSS/jemboss/org/emboss/jemboss/draw/PrintDNAImage.java
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$8.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$9.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$ColorEditor.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$ColorRenderer.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme$RETableModel.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/RestrictionEnzyme.java
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Ticks$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Ticks$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Ticks.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Ticks.java
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Wizard.class
share/EMBOSS/jemboss/org/emboss/jemboss/draw/Wizard.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignApplet.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$10.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$11.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$12.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$13.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$14.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$15.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$16.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$17.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$18.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$19.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$20.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$21.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$22.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$23.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$24.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$25.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$26.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$27.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$28.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$29.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$30.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$31.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$32.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$33.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$34.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$35.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$36.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$37.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$38.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$8.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$9.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame$winExit.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/AlignJFrame.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ColourJFrame$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ColourJFrame$ResidueColourPanel.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ColourJFrame.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ColourJFrame.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ColourMenu$ColorPane.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ColourMenu.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ColourMenu.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ColourPanel$PopupListener.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ColourPanel.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ColourPanel.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/Consensus.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/Consensus.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ConsensusOptions$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ConsensusOptions$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ConsensusOptions.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/ConsensusOptions.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/GraphicSequenceCollection.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/GraphicSequenceCollection.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/GroutAlignJFrame.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/GroutAlignJFrameEvent.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/GroutAlignJFrameListener.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/GroutGraphicSequenceCollection.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/GroutGraphicSequenceCollectionEvent.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/GroutGraphicSequenceCollectionListener.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/GroutSequence.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/GroutSequenceJPanel.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/IDTableJFrame$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/IDTableJFrame$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/IDTableJFrame.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/IDTableJFrame.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/Matrix.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/Matrix.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/MatrixJFrame$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/MatrixJFrame$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/MatrixJFrame$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/MatrixJFrame.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/MatrixJFrame.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/Paste.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/Paste.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PatternJFrame$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PatternJFrame$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PatternJFrame$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PatternJFrame.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PatternJFrame.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PlotConsensus.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PlotConsensus.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrettyPlotJFrame$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrettyPlotJFrame$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrettyPlotJFrame$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrettyPlotJFrame$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrettyPlotJFrame$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrettyPlotJFrame.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrettyPlotJFrame.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrintAlignment.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrintAlignment.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrintAlignmentImage.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrintableJTable.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/PrintableJTable.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/Sequence.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/Sequence.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceJPanel$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceJPanel$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceJPanel$PopupListener.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceJPanel.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceJPanel.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceNameJButton.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceNameJButton.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceProperties.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceProperties.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceReader.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceReader.java
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceSaver.class
share/EMBOSS/jemboss/org/emboss/jemboss/editor/SequenceSaver.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/AdvancedOptions$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/AdvancedOptions$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/AdvancedOptions.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/AdvancedOptions.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/Browser$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/Browser$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/Browser$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/Browser$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/Browser$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/Browser$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/Browser$JIconButton.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/Browser.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/Browser.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/BuildProgramMenu$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/BuildProgramMenu$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/BuildProgramMenu$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/BuildProgramMenu$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/BuildProgramMenu$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/BuildProgramMenu$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/BuildProgramMenu$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/BuildProgramMenu$8.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/BuildProgramMenu.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/BuildProgramMenu.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ColorMenu$ColorPane.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ColorMenu.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ColumnData.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/DragJTable.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ImageIconJPanel.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ImageIconJPanel.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/LaunchJalView$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/LaunchJalView$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/LaunchJalView.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/LaunchJalView.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/MemoryComboBox.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/MemoryComboBox.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$10.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$11.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$12.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$13.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$14.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$15.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$16.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$17.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$18.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$19.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$20.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$8.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar$9.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ResultsMenuBar.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ScrollPanel.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ScrollPanel.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceData.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceData.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceList$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceList$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceList$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceList$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceList$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceList$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceList$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceList.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceList.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SequenceListTableModel.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$10.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$11.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$12.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$8.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar$9.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SetUpMenuBar.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowResultSet$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowResultSet$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowResultSet$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowResultSet$GroutPanelListener.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowResultSet.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowResultSet.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$10.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$11.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$12.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$13.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$14.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$15.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$8.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults$9.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/ShowSavedResults.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SplashThread.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SplashThread.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SwingWorker$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SwingWorker$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SwingWorker$ThreadVar.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SwingWorker.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/SwingWorker.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/TabListCellRenderer.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/DragTree$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/DragTree$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/DragTree$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/DragTree$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/DragTree$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/DragTree$PopupListener.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/DragTree.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/DragTree.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/FileEditorDisplay.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/FileEditorDisplay.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/FileNode$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/FileNode.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/FileNode.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/FileSave.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/FileSave.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/FileSaving.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/FileSaving.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/LocalAndRemoteFileTreeFrame$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/LocalAndRemoteFileTreeFrame$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/LocalAndRemoteFileTreeFrame$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/LocalAndRemoteFileTreeFrame$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/LocalAndRemoteFileTreeFrame$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/LocalAndRemoteFileTreeFrame.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/LocalAndRemoteFileTreeFrame.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree$PopupListener.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteDragTree.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteFileNode.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteFileNode.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteFileTreePanel$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteFileTreePanel.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree/RemoteFileTreePanel.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/AlignFormat.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/AlignFormat.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/ApplicationNamePanel.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/ApplicationNamePanel.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/BuildJembossForm$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/BuildJembossForm$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/BuildJembossForm.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/BuildJembossForm.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/JembossComboPopup$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/JembossComboPopup$myComboUI.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/JembossComboPopup.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/JembossComboPopup.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/LabelTextBox.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/LabelTextBox.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/ListFilePanel.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/ListFilePanel.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/MultiLineToolTipUI$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/MultiLineToolTipUI$MyToolTip.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/MultiLineToolTipUI.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/MultiLineToolTipUI.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/PlafMacros.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/PlafMacros.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/ReportFormat.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/ReportFormat.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SectionPanel$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SectionPanel$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SectionPanel$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SectionPanel$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SectionPanel$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SectionPanel.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SectionPanel.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/Separator.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/Separator.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetInFileCard$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetInFileCard$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetInFileCard$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetInFileCard$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetInFileCard$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetInFileCard$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetInFileCard$7.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetInFileCard$8.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetInFileCard.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetInFileCard.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetOutFileCard$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetOutFileCard.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/SetOutFileCard.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/TextFieldFloat$DecimalNumberDocument.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/TextFieldFloat.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/TextFieldFloat.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/TextFieldInt$WholeNumberDocument.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/TextFieldInt.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/TextFieldInt.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/TextFieldSink.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/form/TextFieldSink.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/CutNPasteTextArea.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/CutNPasteTextArea.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/FileChooser$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/FileChooser.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/FileChooser.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/InputSequenceAttributes$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/InputSequenceAttributes.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/InputSequenceAttributes.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/OutputSequenceAttributes.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/SequenceFilter.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/SequenceFilter.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/TextAreaSink$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/TextAreaSink.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser/TextAreaSink.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/startup/Database.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/startup/Database.java
share/EMBOSS/jemboss/org/emboss/jemboss/gui/startup/ProgList$HorizontalMenu.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/startup/ProgList.class
share/EMBOSS/jemboss/org/emboss/jemboss/gui/startup/ProgList.java
share/EMBOSS/jemboss/org/emboss/jemboss/parser/AcdFunResolve.class
share/EMBOSS/jemboss/org/emboss/jemboss/parser/AcdFunResolve.java
share/EMBOSS/jemboss/org/emboss/jemboss/parser/AcdVarResolve.class
share/EMBOSS/jemboss/org/emboss/jemboss/parser/AcdVarResolve.java
share/EMBOSS/jemboss/org/emboss/jemboss/parser/AcdVariableResolve.class
share/EMBOSS/jemboss/org/emboss/jemboss/parser/AcdVariableResolve.java
share/EMBOSS/jemboss/org/emboss/jemboss/parser/Ajax.class
share/EMBOSS/jemboss/org/emboss/jemboss/parser/Ajax.java
share/EMBOSS/jemboss/org/emboss/jemboss/parser/AjaxUtil.class
share/EMBOSS/jemboss/org/emboss/jemboss/parser/AjaxUtil.java
share/EMBOSS/jemboss/org/emboss/jemboss/parser/Dependent.class
share/EMBOSS/jemboss/org/emboss/jemboss/parser/Dependent.java
share/EMBOSS/jemboss/org/emboss/jemboss/parser/ParseAcd.class
share/EMBOSS/jemboss/org/emboss/jemboss/parser/ParseAcd.java
share/EMBOSS/jemboss/org/emboss/jemboss/parser/acd/ApplicationFields.class
share/EMBOSS/jemboss/org/emboss/jemboss/parser/acd/ApplicationFields.java
share/EMBOSS/jemboss/org/emboss/jemboss/parser/acd/ApplicationParam.class
share/EMBOSS/jemboss/org/emboss/jemboss/parser/acd/ApplicationParam.java
share/EMBOSS/jemboss/org/emboss/jemboss/programs/BatchUpdateTimer$RemindTask.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/BatchUpdateTimer.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/BatchUpdateTimer.java
share/EMBOSS/jemboss/org/emboss/jemboss/programs/JembossProcess.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/JembossProcess.java
share/EMBOSS/jemboss/org/emboss/jemboss/programs/ListFile$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/ListFile.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/ListFile.java
share/EMBOSS/jemboss/org/emboss/jemboss/programs/ResultList.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/ResultList.java
share/EMBOSS/jemboss/org/emboss/jemboss/programs/ResultsUpdateTimer$ResultsTask.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/ResultsUpdateTimer.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/ResultsUpdateTimer.java
share/EMBOSS/jemboss/org/emboss/jemboss/programs/RunEmbossApplication.java
share/EMBOSS/jemboss/org/emboss/jemboss/programs/RunEmbossApplication2$StderrHandler.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/RunEmbossApplication2$StdoutHandler.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/RunEmbossApplication2.class
share/EMBOSS/jemboss/org/emboss/jemboss/programs/RunEmbossApplication2.java
share/EMBOSS/jemboss/org/emboss/jemboss/server/AppendToLogFileThread.java
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossAuthServer.java
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossFileAuthServer.java
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossFileServer$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossFileServer.class
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossFileServer.java
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossServer$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossServer$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossServer$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossServer$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossServer$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossServer.class
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossServer.java
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossThread.class
share/EMBOSS/jemboss/org/emboss/jemboss/server/JembossThread.java
share/EMBOSS/jemboss/org/emboss/jemboss/server/TestPrivateServer.java
share/EMBOSS/jemboss/org/emboss/jemboss/server/TestPublicServer.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/AuthPopup$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/AuthPopup$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/AuthPopup$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/AuthPopup$4.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/AuthPopup$5.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/AuthPopup$6.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/AuthPopup.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/AuthPopup.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/CallAjax.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/CallAjax.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/FileList.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/FileList.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/FileRoots.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/FileRoots.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/GetACD.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/GetACD.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/GetHelp.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/GetHelp.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/GetWossname.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/GetWossname.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/JembossRun.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/JembossRun.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/JembossSoapException.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/JembossSoapException.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/MakeFileSafe.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/MakeFileSafe.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/PendingResults$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/PendingResults$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/PendingResults.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/PendingResults.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/PrivateRequest.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/PrivateRequest.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/PublicRequest.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/PublicRequest.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/ServerSetup$1.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/ServerSetup$2.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/ServerSetup$3.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/ServerSetup.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/ServerSetup.java
share/EMBOSS/jemboss/org/emboss/jemboss/soap/ShowDB.class
share/EMBOSS/jemboss/org/emboss/jemboss/soap/ShowDB.java
share/EMBOSS/jemboss/readme.html
share/EMBOSS/jemboss/resources/Ajax.jar
share/EMBOSS/jemboss/resources/acdstore.jar
share/EMBOSS/jemboss/resources/filemgr.html
share/EMBOSS/jemboss/resources/jemboss.properties
share/EMBOSS/jemboss/resources/jemboss.properties.ORIGINAL
share/EMBOSS/jemboss/resources/readme.html
share/EMBOSS/jemboss/resources/readmeAlign.html
share/EMBOSS/jemboss/resources/readmeDNADraw.html
share/EMBOSS/jemboss/resources/resources.jar
share/EMBOSS/jemboss/resources/results.html
share/EMBOSS/jemboss/resources/seqList.html
share/EMBOSS/jemboss/resources/version
share/EMBOSS/jemboss/resources/wossname.jar
share/EMBOSS/jemboss/runJemboss.sh
share/EMBOSS/jemboss/runJemboss.sh.new3
@dirrm share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/filetree
@dirrm share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/form
@dirrm share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/sequenceChooser
@dirrm share/EMBOSS/jemboss/api/org/emboss/jemboss/gui/startup
@dirrm share/EMBOSS/jemboss/api/org/emboss/jemboss/gui
@dirrm share/EMBOSS/jemboss/api/org/emboss/jemboss/parser/acd
@dirrm share/EMBOSS/jemboss/api/org/emboss/jemboss/parser
@dirrm share/EMBOSS/jemboss/api/org/emboss/jemboss/programs
@dirrm share/EMBOSS/jemboss/api/org/emboss/jemboss/soap
@dirrm share/EMBOSS/jemboss/api/org/emboss/jemboss
@dirrm share/EMBOSS/jemboss/api/org/emboss
@dirrm share/EMBOSS/jemboss/api/org
@dirrm share/EMBOSS/jemboss/api
@dirrm share/EMBOSS/jemboss/images
@dirrm share/EMBOSS/jemboss/lib/axis
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/draw
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/editor
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/gui/filetree
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/gui/form
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/gui/sequenceChooser
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/gui/startup
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/gui
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/parser/acd
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/parser
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/programs
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/server
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss/soap
@dirrm share/EMBOSS/jemboss/org/emboss/jemboss
@dirrm share/EMBOSS/jemboss/org/emboss
@dirrm share/EMBOSS/jemboss/org
@dirrm share/EMBOSS/jemboss/lib
@dirrm share/EMBOSS/jemboss/resources
@dirrm share/EMBOSS/jemboss/utils
@dirrm share/EMBOSS/jemboss