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SPatt (Statistic for Patterns) is a suite of C++ programs designed for the computation of pattern occurrences p-value on text. Assuming the text is generated according to Markov model, the p-value of a given observation is its probability to occur. The lower is the p-value, the more unlikely is the observation. For example, this tools can be used to find patterns with unusual behaviour in DNA sequences
6 lines
406 B
Text
6 lines
406 B
Text
SPatt (Statistic for Patterns) is a suite of C++ programs designed for
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the computation of pattern occurrences p-value on text. Assuming the text
|
|
is generated according to Markov model, the p-value of a given observation
|
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is its probability to occur. The lower is the p-value, the more unlikely is
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the observation. For example, this tools can be used to find patterns with
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|
unusual behaviour in DNA sequences
|