55 lines
2.6 KiB
Text
55 lines
2.6 KiB
Text
$NetBSD: patch-ac,v 1.1.1.1 2004/11/15 20:23:10 daprice Exp $
|
|
|
|
--- src/Makefile.in.orig Tue Jul 27 14:54:57 2004
|
|
+++ src/Makefile.in Tue Jul 27 15:03:11 2004
|
|
@@ -48,7 +48,7 @@
|
|
$(top_srcdir)/configure.in
|
|
am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
|
|
$(ACLOCAL_M4)
|
|
-mkinstalldirs = $(mkdir_p)
|
|
+mkinstalldirs = $(SHELL) ../mkinstalldirs
|
|
CONFIG_CLEAN_FILES =
|
|
am__installdirs = "$(DESTDIR)$(libdir)" "$(DESTDIR)$(bindir)"
|
|
libLTLIBRARIES_INSTALL = $(INSTALL)
|
|
@@ -70,12 +70,12 @@
|
|
am__DEPENDENCIES_1 =
|
|
@LOCALLINK_FALSE@meme_DEPENDENCIES = libmeme.la $(am__DEPENDENCIES_1)
|
|
@LOCALLINK_TRUE@meme_DEPENDENCIES = libmeme.la \
|
|
-@LOCALLINK_TRUE@ ../../../nucleus/libnucleus.la \
|
|
-@LOCALLINK_TRUE@ ../../../ajax/libajax.la \
|
|
-@LOCALLINK_TRUE@ ../../../plplot/libplplot.la \
|
|
+@LOCALLINK_TRUE@ @EMBOSSLIB@/libnucleus.la \
|
|
+@LOCALLINK_TRUE@ @EMBOSSLIB@/libajax.la \
|
|
+@LOCALLINK_TRUE@ @EMBOSSLIB@/libplplot.la \
|
|
@LOCALLINK_TRUE@ $(am__DEPENDENCIES_1)
|
|
DEFAULT_INCLUDES = -I. -I$(srcdir)
|
|
-depcomp = $(SHELL) $(top_srcdir)/depcomp
|
|
+depcomp = $(SHELL) ../depcomp
|
|
am__depfiles_maybe = depfiles
|
|
@AMDEP_TRUE@DEP_FILES = ./$(DEPDIR)/align.Plo ./$(DEPDIR)/banner.Plo \
|
|
@AMDEP_TRUE@ ./$(DEPDIR)/chi.Plo ./$(DEPDIR)/clock.Plo \
|
|
@@ -246,11 +246,11 @@
|
|
target_alias = @target_alias@
|
|
SUBDIRS = INCLUDE
|
|
lib_LTLIBRARIES = libmeme.la
|
|
-@LOCALLINK_FALSE@INCLUDES = -IINCLUDE -I${embprefix}/include
|
|
-@LOCALLINK_TRUE@INCLUDES = -IINCLUDE -I../../../ajax
|
|
+@LOCALLINK_FALSE@INCLUDES = -IINCLUDE -I@INCLUDE@
|
|
+@LOCALLINK_TRUE@INCLUDES = -IINCLUDE -I@INCLUDE@
|
|
@ISAIXIA64_FALSE@@ISSHARED_TRUE@AM_CFLAGS =
|
|
-@ISAIXIA64_TRUE@@ISSHARED_TRUE@@LOCALLINK_FALSE@AM_CFLAGS = -Wl,-bdynamic -Wl,-brtl -L../../../ajax/.libs -lajax
|
|
-@ISAIXIA64_TRUE@@ISSHARED_TRUE@@LOCALLINK_TRUE@AM_CFLAGS = -Wl,-bdynamic -Wl,-brtl -L../../../ajax/.libs -lajax
|
|
+@ISAIXIA64_TRUE@@ISSHARED_TRUE@@LOCALLINK_FALSE@AM_CFLAGS = -Wl,-bdynamic -Wl,-brtl -L@EMBOSSLIB@ -lajax
|
|
+@ISAIXIA64_TRUE@@ISSHARED_TRUE@@LOCALLINK_TRUE@AM_CFLAGS = -Wl,-bdynamic -Wl,-brtl -L@EMBOSSLIB@ -lajax
|
|
MEMESRC = clock.c display.c em.c init.c meme_util.c seq2theta.c \
|
|
shorten.c starts.c prior.c split.c align.c justlike.c \
|
|
oops.c tcm.c zoops.c banner.c logs.c palindrome.c gamma.c \
|
|
@@ -262,7 +262,7 @@
|
|
libmeme_la_LDFLAGS = -version-info 2:3:1
|
|
meme_SOURCES = meme.c
|
|
@LOCALLINK_FALSE@LDADD = libmeme.la -L${embprefix}/lib -lnucleus -lajax -lplplot $(XLIB)
|
|
-@LOCALLINK_TRUE@LDADD = libmeme.la ../../../nucleus/libnucleus.la ../../../ajax/libajax.la ../../../plplot/libplplot.la $(XLIB)
|
|
+@LOCALLINK_TRUE@LDADD = libmeme.la @EMBOSSLIB@/libnucleus.la @EMBOSSLIB@/libajax.la @EMBOSSLIB@/libplplot.la $(XLIB)
|
|
all: all-recursive
|
|
|
|
.SUFFIXES:
|