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*: bump PKGREVISION for perl-5.32.
2020-08-31 20:06:29 +02:00
# $NetBSD: Makefile,v 1.71 2020/08/31 18:10:57 wiz Exp $
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
Update to sge 8.1.6 Version 8.1.6 ------------- * Bug fixes Version 8.1.5 ------------- * Bug fixes Version 8.1.4 ------------- Milestone version: over 1000 patches since the last from Sun * Bug fixes * Enhancements * qacct: print category information; support -A like -P ; make -u a synonym for -o; -E selects on job end times read from standard input with -f * Move manager/operator setup in startup scripts * Installation creates an environment modules file * Add monitor_qmaster.sh script * Write shepherd panic messages to syslog, not into /tmp * Add .desktop file for qmon * rpm/dpkg packaging allows building against motif (recent Debian/Fedora) * Accounting reports qmaster-enforced resource limits (only on master PE task if accounting_summary is false) * Add "smp" to the default queue PE list * install_execd doesn't check the presence of (mostly irrelevant) binaries * Add configuration for logcheck * Potentially incompatible changes * renew_all_certs.ksh re-named to renew_all_certs.sh * Expand $ja_task_id to 0 for non-array jobs * Move manager/operator setup in startup scripts * For security reasons, installation defaults for min_uid, min_gid in sge_conf(5) are now 100 without CSP. See <http://arc.liv.ac.uk/SGE/howto/sge-security.html> * RPM layout changed to put relevant ones under noarch (on RHEL6 and recent Fedora), with a separate guiinst package * Memory values can be input and output in TB or tB (possible incompatibility parsing output) * Reduce execd CPU time reading large smaps files from Linux /proc and provide USE_SMAPS in execd_params to turn it on (default now off because huge smaps are generated by some programs) * Remove redundant -verify option from qsh, qlogin (per doc) Version 8.1.3 ------------- * Bug fixes * Enhancements * Document Interix building explicitly * qstat reports array task maximum concurrency * qstatus removes [] suffix for non-array jobs if -t was requested * Read /etc/default/{sgeexecd,sgemaster} to allow customizing rc scripts * Location of daemon pid files can be specified with SGE_QMASTER_PIDFILE, SGE_EXECD_PIDFILE * Debian packaging (as an add-on, installing into /opt/sge) * Expand $sge_root and $sge_cell in the definitions of prolog and similar methods * Check in init script that shepherd will load * Add lx-armhf architecture * On Linux and NetBSD, report jobs' virtual memory usage as accurately as possible * Add -nobincheck installation option to avoid checking binaries * Add some build hooks, useful for Debian particularly. * Potentially incompatible changes * qacct prints units (might affect parsing the output) * Correct spelling of "comunication_error" in qstat XML error output * Fix problems submitting to ARs (printing times now doesn't use a days field in qstat etc.) * Java version >= 1.5 required * Lower default MAX_DYN_EC somewhat to avoid warning on typical Linux configurations * Other changes * Don't install the ckpt directory (contents obsolete) Version 8.1.2 ------------- * Bug fixes * Enhancements * Use cpusets for process containment on fairly recent Linux-based systems (see USE_CGROUPS in sge_conf(5)) * Add bootstrap build script * Make SGE template an RPM conf file * Incompatible changes * Make CRL and certificate expiry consistent Version 8.1.1 ------------- * Bug fixes * Security * Don't pass any user environment to remote startup daemons -- better fix for half of CVE-2012-0208 * Enhancements * SGE_BINDING is set in the environment for all types of binding * New jobstats(1) provides historical job summary * Berkeleydb spools can optionally be opened "private" to allow operation on NFS3 filesystems. Currently no installer support, but see bootstrap(5) and the health warning * Environment variable SGE_DRMAA_ALLOW_JOB_ERROR_STATE allows DRMAA jobs to enter the error state; see drmaa_submit(3) * Define SGE_JOBEXIT_STAT environment variable in epilog; see submit(1) * The user from which mail is sent can be configured in sge_conf(5) * Topology items are now static load values; see load_parameters(5) * qstat now prints array job dependency info * Default to support for qsort_args in sge_pe(5) * Include an example of logrotate usage * Install an "smp" PE * Distribute/document sge_share_mon(1) to print share tree * Improve install template defaults * GPU load sensor (dist/util/resources/loadsensors/gpu-loadsensor.c) * Allow building Kerberos/GSSAPI security modules against Heimdal (but GSS is still not properly usable) * Support arm and mipsel on GNU/Linux, completing the set of official Debian Linux-based ports * Support for OpenBSD (untested) * Preliminary support for Cygwin: everything builds, clients work (lightly tested), daemons need fixing * Add ja_task_id to expandable variables in ckpt_command and similar methods * distinst supports installation with install(1) for use with -local * Incompatible changes * The CA directory is now /var/lib/sgeCA instead of /var/sgeCA but installation will offer to move it [fixme] * Drop (any pretence at) support for Cray/Unicos, NEC SX, Darwin 6 * The spool format for parallel job tasks has changed from any previous version built with qsort_args (as above), which will make live upgrades from such a version fail on nodes running parallel jobs * Other changes * Extensive internal changes to improve robustness, e.g. of string-handling against buffer overruns -- somewhat error-prone and may have caused regressions; more required * Install script allows rsh et al to be omitted from binary distribution in favour of ssh Version 8.1.0 ------------- * Security fix * Prevent users other than root deleting entries with sgepasswd * Version numbering * Switch to a more logical numbering scheme now that the Univa baseline is irrelevant * Bug fixes * Other changes * Hadoop support now for a more recent Hadoop distribution (see README.BUILD) Version 8.0.0e -------------- Mostly build and security issues * Bug fixes * Security fixes The first fix is for a trivial remote root by a valid user. The others, including fixes for potential buffer overruns in daemon and setuid programs, may or may not be exploitable. * Sanitize the environment before executing remote startup programs etc. Somewhat incompatible: LD_LIBRARY_PATH etc. may need to be set differently. See the security notes in remote_startup(5) and sge_conf(5). (CVE-2012-0208, thanks to William Hay) * Don't write initial log messages in /tmp. Somewhat incompatible: initial messages now in syslog. * Avoid using mktemp. (Probably not a significant problem.) * Control core dumps under setuid etc. with SGE_ENABLE_COREDUMP. (Not normally a security issue.) * Bounds checking in replace_params * Avoid execd crash and possible overruns * Fixes for buffer overrun and other improvements for (setuid program) sgepasswd
2014-01-14 11:21:39 +01:00
DISTNAME= sge-8.1.6
*: bump PKGREVISION for perl-5.32.
2020-08-31 20:06:29 +02:00
PKGREVISION= 9
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
CATEGORIES= parallel sysutils
Update to sge 8.1.6 Version 8.1.6 ------------- * Bug fixes Version 8.1.5 ------------- * Bug fixes Version 8.1.4 ------------- Milestone version: over 1000 patches since the last from Sun * Bug fixes * Enhancements * qacct: print category information; support -A like -P ; make -u a synonym for -o; -E selects on job end times read from standard input with -f * Move manager/operator setup in startup scripts * Installation creates an environment modules file * Add monitor_qmaster.sh script * Write shepherd panic messages to syslog, not into /tmp * Add .desktop file for qmon * rpm/dpkg packaging allows building against motif (recent Debian/Fedora) * Accounting reports qmaster-enforced resource limits (only on master PE task if accounting_summary is false) * Add "smp" to the default queue PE list * install_execd doesn't check the presence of (mostly irrelevant) binaries * Add configuration for logcheck * Potentially incompatible changes * renew_all_certs.ksh re-named to renew_all_certs.sh * Expand $ja_task_id to 0 for non-array jobs * Move manager/operator setup in startup scripts * For security reasons, installation defaults for min_uid, min_gid in sge_conf(5) are now 100 without CSP. See <http://arc.liv.ac.uk/SGE/howto/sge-security.html> * RPM layout changed to put relevant ones under noarch (on RHEL6 and recent Fedora), with a separate guiinst package * Memory values can be input and output in TB or tB (possible incompatibility parsing output) * Reduce execd CPU time reading large smaps files from Linux /proc and provide USE_SMAPS in execd_params to turn it on (default now off because huge smaps are generated by some programs) * Remove redundant -verify option from qsh, qlogin (per doc) Version 8.1.3 ------------- * Bug fixes * Enhancements * Document Interix building explicitly * qstat reports array task maximum concurrency * qstatus removes [] suffix for non-array jobs if -t was requested * Read /etc/default/{sgeexecd,sgemaster} to allow customizing rc scripts * Location of daemon pid files can be specified with SGE_QMASTER_PIDFILE, SGE_EXECD_PIDFILE * Debian packaging (as an add-on, installing into /opt/sge) * Expand $sge_root and $sge_cell in the definitions of prolog and similar methods * Check in init script that shepherd will load * Add lx-armhf architecture * On Linux and NetBSD, report jobs' virtual memory usage as accurately as possible * Add -nobincheck installation option to avoid checking binaries * Add some build hooks, useful for Debian particularly. * Potentially incompatible changes * qacct prints units (might affect parsing the output) * Correct spelling of "comunication_error" in qstat XML error output * Fix problems submitting to ARs (printing times now doesn't use a days field in qstat etc.) * Java version >= 1.5 required * Lower default MAX_DYN_EC somewhat to avoid warning on typical Linux configurations * Other changes * Don't install the ckpt directory (contents obsolete) Version 8.1.2 ------------- * Bug fixes * Enhancements * Use cpusets for process containment on fairly recent Linux-based systems (see USE_CGROUPS in sge_conf(5)) * Add bootstrap build script * Make SGE template an RPM conf file * Incompatible changes * Make CRL and certificate expiry consistent Version 8.1.1 ------------- * Bug fixes * Security * Don't pass any user environment to remote startup daemons -- better fix for half of CVE-2012-0208 * Enhancements * SGE_BINDING is set in the environment for all types of binding * New jobstats(1) provides historical job summary * Berkeleydb spools can optionally be opened "private" to allow operation on NFS3 filesystems. Currently no installer support, but see bootstrap(5) and the health warning * Environment variable SGE_DRMAA_ALLOW_JOB_ERROR_STATE allows DRMAA jobs to enter the error state; see drmaa_submit(3) * Define SGE_JOBEXIT_STAT environment variable in epilog; see submit(1) * The user from which mail is sent can be configured in sge_conf(5) * Topology items are now static load values; see load_parameters(5) * qstat now prints array job dependency info * Default to support for qsort_args in sge_pe(5) * Include an example of logrotate usage * Install an "smp" PE * Distribute/document sge_share_mon(1) to print share tree * Improve install template defaults * GPU load sensor (dist/util/resources/loadsensors/gpu-loadsensor.c) * Allow building Kerberos/GSSAPI security modules against Heimdal (but GSS is still not properly usable) * Support arm and mipsel on GNU/Linux, completing the set of official Debian Linux-based ports * Support for OpenBSD (untested) * Preliminary support for Cygwin: everything builds, clients work (lightly tested), daemons need fixing * Add ja_task_id to expandable variables in ckpt_command and similar methods * distinst supports installation with install(1) for use with -local * Incompatible changes * The CA directory is now /var/lib/sgeCA instead of /var/sgeCA but installation will offer to move it [fixme] * Drop (any pretence at) support for Cray/Unicos, NEC SX, Darwin 6 * The spool format for parallel job tasks has changed from any previous version built with qsort_args (as above), which will make live upgrades from such a version fail on nodes running parallel jobs * Other changes * Extensive internal changes to improve robustness, e.g. of string-handling against buffer overruns -- somewhat error-prone and may have caused regressions; more required * Install script allows rsh et al to be omitted from binary distribution in favour of ssh Version 8.1.0 ------------- * Security fix * Prevent users other than root deleting entries with sgepasswd * Version numbering * Switch to a more logical numbering scheme now that the Univa baseline is irrelevant * Bug fixes * Other changes * Hadoop support now for a more recent Hadoop distribution (see README.BUILD) Version 8.0.0e -------------- Mostly build and security issues * Bug fixes * Security fixes The first fix is for a trivial remote root by a valid user. The others, including fixes for potential buffer overruns in daemon and setuid programs, may or may not be exploitable. * Sanitize the environment before executing remote startup programs etc. Somewhat incompatible: LD_LIBRARY_PATH etc. may need to be set differently. See the security notes in remote_startup(5) and sge_conf(5). (CVE-2012-0208, thanks to William Hay) * Don't write initial log messages in /tmp. Somewhat incompatible: initial messages now in syslog. * Avoid using mktemp. (Probably not a significant problem.) * Control core dumps under setuid etc. with SGE_ENABLE_COREDUMP. (Not normally a security issue.) * Bounds checking in replace_params * Avoid execd crash and possible overruns * Fixes for buffer overrun and other improvements for (setuid program) sgepasswd
2014-01-14 11:21:39 +01:00
MASTER_SITES= http://arc.liv.ac.uk/downloads/SGE/releases/8.1.6/
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
Point MAINTAINER to pkgsrc-users@NetBSD.org in the case where no developer is officially maintaining the package. The rationale for changing this from "tech-pkg" to "pkgsrc-users" is that it implies that any user can try to maintain the package (by submitting patches to the mailing list). Since the folks most likely to care about the package are the folks that want to use it or are already using it, this would leverage the energy of users who aren't developers.
2006-03-04 22:28:51 +01:00
MAINTAINER= pkgsrc-users@NetBSD.org
Update to the Son of Grid Engine 8.0.0d The Son of Grid Engine is a community project to continue Sun Grid Engine. Notable changes in Son of Grid Engine ------------------------------------- Version 8.0.0d -------------- * Bug fixes * Man and fixes * Fix building with older gcc versions * Provide load average in qstat XML output [#446, #454] * Partially back out Univa change which broke classic spooling * Fix -terse in sge_request [#777] * Other changes (possibly-incompatible) * Message fixes Version 8.0.0c -------------- * Bug fixes * Man and other documentation fixes * Build/installation fixes (particularly for Red Hat 6 and Linux 3) * Fix group ids for submitted jobs [U] * Fix default value of boolean with JSV [U] * Windows fixes for helper crashes and Vista GUI jobs [U] * Ensure parallel jobs are dispatched to the least loaded host [U] * Correct ownership of qsub -pty output file; was owned by admin user [U] * Fix format of Windows loadcheck.exe output [U] * Read from stderr even if stdout is already closed in IJS [U] * Fix PDC_INTERVAL=NEVER execd parameter [U] * Fix accounting information for Windows GUI jobs [U] * Increase default MAX_DYN_EC qmaster param [U] * Fix qsub -sync y error message and enforce MAX_DYN_EC correctly [U] * Fix job validation (-w e) behaviour [#716] [U] * Fix qrsh input redirection [U] * Avoid warning when submitting a qrsh job [U] * Print start time in qstat -j -xml output [U] * Don't raise an error changing resource request on waiting job [#806] * Don't exit 0 on error with qconf -secl or -sep * Include string.h in drmaa.h [#712] * Fix process-scheduler-log with host aliases * Enhancements * Base qmake and qtcsh on the current gmake and tcsh source [#289, #504, #832] * Support "-binding linear" and "-binding linear:slots" * Use the hwloc library for all topology information and core binding, supporting more operating systems (now: AIX, Darwin, FreeBSD, GNU/Linux, HPUX, MS Windows, OSF/1, Solaris), and more hardware types (specifically AMD Magny Cours and similar) * Add task number to execd "exceeds job ... limit" * Other changes (possibly-incompatible) * Modify default paths in build files and elsewhere [U] * Assorted message fixes * In RPMs, move qsched to qmaster package, and separate drmaa4ruby * Default to newijs in load_sge_config.sh * Default to sh, not csh for configured shell Version 8.0.0b -------------- * Bug fixes * Build/installation fixes [including #424, #1349] [(U)] * Fix execd init script [#1348] * Man and other documentation fixes [including #614, #764] [(U)] * Fix contents of admin mail properly [#1307, #1345] * Fix qalter messages for -tc * Fix build with -DSGE_PQS_API * Fix group ids for submitted jobs [U] * Enhancements * Update qsched and add man page * Other changes (possibly-incompatible) * Avoid the use of /bin/ksh [#1306] * Change installation defaults to classic spooling, not adding shadow hosts, and not JMX. [(U)] Version 8.0.0a -------------- This is roughly a superset of Univa's 8.0.0 (the V800_TAG from https://github.com/gridengine/gridengine), with thanks for that. Changes made there which haven't been included in this version: PLPA source not removed; some different build/installation defaults (e.g. for JMX); Univa/UGE "branding" (partly because trademark status is unknown); authuser not removed (for SDM and testing use), * Bug fixes * Many man and other documentation fixes [including #790, #776, #769, #733, #610, #587, #581, #459, #456, #439, #255, #1288, #797, #1271, #773] [(U)] * Some program message fixes [(U)] * Various build and installation fixes [including #761, #709, #656, #616, #546, #536, #521, #491, #438, #414, #411, #383, #381, #138, #455, #344, #438, #1311, #1272, #1273] [(U)] * Ask for keystore password twice on installation * Fix qmaster crashes with tightly integrated parallel jobs or un-discoverable qinstance [#789] [U] * Report 0 cores and sockets on unsupported Solaris hosts [U] * Fix malloc hooks which caused crashes, particularly with SuSE 11 [#792, #748, #749] [U] * Verify the pe task start user in execd in non-CSP mode [U] * Fix binding parameters parsing [U] * Fix JSV logging with multiple users submitting jobs on same submit host [U] * Fix unresponsive qmaster when modifying the global configuration in a huge cluster [U] * Speed up finishing tightly integrated jobs [U] * Check consistency of JSV binding information properly [U] * Fix broken project spooling, which caused loss of project when restarting master when using core binding [U] * Fix slotwise preemption failure to unsuspend one job per host [#775] [U] * Fix problems retrieving passwd and group information with large responses [#1295] [(U)] * Fix JSV changing default of boolean [U] * Fix ENABLE_RESCHEDULE_SLAVE=1 [U] * Allow comma in CMDNAME with Perl JSV scripts [#803] * Don't put queue into error state when supplementary group id cannot be set [#185] [U] * Don't convert LF to CRLF with qrsh -pty [U] * Fix qconf segfault on bad subordination string [U] * Fix group ids of submitted jobs [U] * Disallow -masterq with serial jobs [#155] [U] * Fix 100% CPU use by shepherd of qsh [U] * Removed unnecessary binding warning on job starts [U] * Fix qconf error reports when tmp directory has 755 permissions [U] * Fix suspending of remote process on qrsh -pty yes <cmd> on Solaris [U] * Fix starting jobs after global host changed [U] * Reject invalid load_formula value [U] * Fix handling of implicitly-requested exclusive resources [U] * Fix execd vmem reporting on 64-bit Linux [U] * Fix startup of execd on Windows Vista [U] * Set xterm's path more appropriately on GNU/Linux [#557] * Fix generation of admin email from failed jobs [#1307] * Fix some ill-formed output from qstat -xml [#314] * Fix handling of multi-line environment variables propagated to shepherd [#395] * Fix example MPI PE templates * Fix bad quoting in JSV sh library * Fix checking of consumables for parallel jobs across multiple hosts [U] * Enhancements * Additional and clarified documentation * PAM modules for ssh tight integration and access control for interactive jobs * Initial core binding support for Solaris/SPARC64 [U] * Some efficiency improvements and memory leaks fixed [U] * Ports to S/390 and PARISC GNU/Linux [U] * New complex m_thread [U] * Show topology by default in qhost [U] * qsub -pty switch [#704] [U] * Improved qmon graphics [#530] [(U)] * Include bash in default shell list [U] * A JSV that rejects all jobs [U] * Files for Scali-MPI * Ruby DRMAA implementation * Enable easy building against shared system libraries and use system openssl and bdb binaries * New scripts: "qsched" reports resource reservations; "status" wraps qstat; enable/disable submission; node-selection (idle etc.) * Restart argument for daemon init scripts * Improved efficiency of shell JSV if used with bash * Core dumps from crashing daemons enabled under Linux [U] * Example host_aliases file [#154] * Spec file for RPM packaging [#820] * Other changes (possibly-incompatible) * Show core binding by default in qstat, qhost (use -ncb for compatibility) [U] * Removed Berkeley DB RPC support (recently dropped by BDB) [U] * Changed position in pending job list for user-rescheduled jobs (exit99, qmod -rj) and OLD_RESCHEDULE_BEHAVIOR, OLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB parameters [U] * Unified GNU/Linux arch strings (lx-*, from lx24-* and lx26-*) [U] * Default to enabling core binding on GNU/Linux [U] * Removed Sun service tags support [U] * Removed obsolete SunHPCT5 files
2012-03-20 18:07:43 +01:00
HOMEPAGE= https://arc.liv.ac.uk/trac/SGE
COMMENT= Son of Grid Engine distributed resource management system
Call sun-iss sissl-1.1 to match OSI.
2016-10-03 13:48:31 +02:00
LICENSE= sissl-1.1 AND 2-clause-bsd AND gnu-gpl-v2 AND gnu-lgpl-v2
Note that the fetch stage is interactive.
2006-10-21 22:25:21 +02:00
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
GNU_CONFIGURE= YES
Set USE_TOOLS instead of BUILD_DEPENDS to get csh, and use ${CSH} instead of "tcsh". This builds ok for me on NetBSD; if it turns out to cause trouble for anyone, revert it. The motivation was that the BUILD_DEPENDS accepted either tcsh or standalone-tcsh, and distbb was latching onto the latter and then failing trying to install it. If the package turns out to really need tcsh in some contexts, there are probably other ways to deal with this issue.
2012-06-02 22:16:09 +02:00
USE_TOOLS+= gmake csh perl:run
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
Reinstate patch-source-utilbin_Makefile (aka patch-ak) Dont install *.orig files Fix build on 64bit systems Fix arch name for Linux Bump PKGREVISION
2012-04-15 06:07:21 +02:00
MANINSTALL= maninstall catinstall
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
CFLAGS+= -D${UPPER_OPSYS}
CONFIGURE_ENV+= REMOTE=sge
Fixed pkglint warnings. The warnings are mostly quoting issues, for example MAKE_ENV+=FOO=${BAR} is changed to MAKE_ENV+=FOO=${BAR:Q}. Some other changes are outlined in http://mail-index.netbsd.org/tech-pkg/2005/12/02/0034.html
2005-12-05 21:49:47 +01:00
CONFIGURE_ENV+= CFLAGS=${CFLAGS:M*:Q}
Update sge to 6.0 Update 11 Bugs fixed in SGE 6.0u11 since release 6.0u10 -------------------------------------------- scalability issue with qdel and very large array jobs loadcheck reports on a hyperthreaded CPU only one processor CSP mode auto installation: certificates are not copied to submit hosts qmon crashes when displaying about dialog sge_schedd deadlock upon schedd_job_info job_list being enabled Qmon has a ticket number limitation qmon on secondary screen crashes when "Job Control" is pressed queue status in reporting file is missing. "Modify"-Button is activated but should be grayed reporting(5) man page lacks information about sharelog records Ability to sort queue instances using each column of the queue instances table Queue request -q from sge_request can't be overridden through command line qdel on a job in deleted state does not output any information qsub -terse to just output job id qrsh man page doesn't explain which options don't work with interactive jobs Numbers in error mail too large still used usersets/project/calendar/pe/checkpoint can be removed under certain conditions remove util/sge_log_tee from distribution shell_start_mode should be documentated to be only used for batch jobs reserved usage not explained in sge_conf.5 Discrepancy between load values reported by Gridengine and from the HP-UX 64 bit env. auto installation option failed to save the install log function job_get_id_string() is not MT save and used in qmaster Broken output of job name with 'qsub -N' meaningless error in clients when reporting_param flush_time is incorrectly set remote installation of execd's need enhancement, rework, cleanup Scheduler does not write pid file in daemonize phase invalid memory access in cl_com_get_handle Qconf usage x man page inconsistency Project man page contains different attribute names. the binary check in inst_sge is wrong! Wrong exit code with qconf -sds qacct -l h=<hostname> dumps core on darwin and linux itanium inst_sge -m fails for non-root when USER variable is not set Extraneous space in qsub's "Invalid month specification." message Hybrid user/project share-tree is broken for user sharing amongst array jobs clear usage operation should implicitely trigger refresh in share-tree dialogue UNKNOWN group/owner in accouting(5) qmon's Complex Configuration Load and Save buttons did not work memory leak in sge_schedd Bugs fixed in SGE 6.0u10 since release 6.0u9 -------------------------------------------- qdel of just submitted job can't start qmaster message appears, but qmaster is started inst_sge script does not add the master host to the shadow_masters file wrong qlogin_daemon or rlogin_daemon in host conf doesn't set host and job into error state reprioritize field in qmon cluster config missing hostname resolving should not be case sensitive drmaa_version() function should return 1.0 DRMAA sessions should be persistent drmaa_control() causes illegal memory access getDrmaaImplementation() should return the same string as getDrmSystem() qconf rejects configuration, when attribute value ends with a space character during QMaster installation, creation of local database directory fails on hp11 the execd auto_install takes too long because of long delays after a parallel install block Unable to modify Advanced Settings in Configuration for Host in my cluster using qmon qacct -l h=<hostname> dump core shared library name DT_SONAME not set with libdrmaa.so Berkeley DB backup failed when using hostname with a fully qualified domain name the inst_common.sh is missing $SGE_EXECD_PORT potential security issues in cull library inst_sge -help wrongly indicates -bup/-rst works with BDB spooling only qping segfaults in ssl mode The sge_share_mon utility does not work with the automatic policy enforcement the auto uninstall execd needs a ssh deamon when the uninstall is done local accounting records for slave tasks of pe jobs contain invalid submission time DRMAA 1.0 interface need complete documentation in man pages qselect matches wrong resources which have been overridden at lower level qsh does not work if XAUTHORITY is set in root environment In certain cases jobs may stay in "t" state for 5 minutes qmaster logging "scheduler tried to remove a incomplete" ignore_fqdn is broken for the local configuration host already exists when modifying cluster settings segmentation fault with empty string qmaster performance gets throttled if qsub -sync y is used when many jobs are in the system sge_conf(5) setting 'max_u_jobs' broken if BDB spooling is used job control: sorting by different fields qmon job control: display wider default columns load formula does not recognize float as weighting factor qmaster dies when modifying slots value for queue domain when queuename is missing spooledit cannot dump USERSET objects default xterm path in arch_variables script not correct for darwin architectures qsh problems on darwin architecture because of wrong crypto lib execution daemon can crash on Linux where libnss_ldap.so uses BDB 4.2 shared library Bugs fixed in SGE 6.0u9 since release 6.0u8 ------------------------------------------- CSP mode is affected by OpenSSL Security Advisory [28th September 2006] account string does not accept the "|" character unreasonably long scheduler dispatch times if lots of projects are used in share tree unreasonably long scheduler dispatch times if lots of cluster queues are deployed in large clusters jobs with negative priority will be rejected by qmaster
2007-08-15 04:03:05 +02:00
CONFIGURE_ARGS+= --with-sge=${SGE_BUILDARCH:Q}
Fixed pkglint warnings. The warnings are mostly quoting issues, for example MAKE_ENV+=FOO=${BAR} is changed to MAKE_ENV+=FOO=${BAR:Q}. Some other changes are outlined in http://mail-index.netbsd.org/tech-pkg/2005/12/02/0034.html
2005-12-05 21:49:47 +01:00
PLIST_SUBST+= SGE_ARCH=${SGE_ARCH:Q}
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
MESSAGE_SUBST+= SGE_ROOT=${SGE_ROOT}
Fixed pkglint warnings. The warnings are mostly quoting issues, for example MAKE_ENV+=FOO=${BAR} is changed to MAKE_ENV+=FOO=${BAR:Q}. Some other changes are outlined in http://mail-index.netbsd.org/tech-pkg/2005/12/02/0034.html
2005-12-05 21:49:47 +01:00
MAKE_ENV+= PERL5=${PERL5:Q}
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
SGE_USER?= sgeadmin
SGE_GROUP?= sgeadmin
PKG_GROUPS= ${SGE_GROUP}
Fix PKG_USERS usage.
2013-10-31 16:58:30 +01:00
PKG_USERS= ${SGE_USER}:${SGE_GROUP}
PKG_GECOS.${SGE_USER}= Sun Grid Engine Administrator
Make it easier to build and install packages "unprivileged", where the owner of all installed files is a non-root user. This change affects most packages that require special users or groups by making them use the specified unprivileged user and group instead. (1) Add two new variables PKG_GROUPS_VARS and PKG_USERS_VARS to unprivileged.mk. These two variables are lists of other bmake variables that define package-specific users and groups. Packages that have user-settable variables for users and groups, e.g. apache and APACHE_{USER,GROUP}, courier-mta and COURIER_{USER,GROUP}, etc., should list these variables in PKG_USERS_VARS and PKG_GROUPS_VARS so that unprivileged.mk can know to set them to ${UNPRIVILEGED_USER} and ${UNPRIVILEGED_GROUP}. (2) Modify packages to use PKG_GROUPS_VARS and PKG_USERS_VARS.
2007-07-04 22:54:31 +02:00
PKG_GROUPS_VARS+= SGE_GROUP
PKG_USERS_VARS+= SGE_USER
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
Set USE_TOOLS instead of BUILD_DEPENDS to get csh, and use ${CSH} instead of "tcsh". This builds ok for me on NetBSD; if it turns out to cause trouble for anyone, revert it. The motivation was that the BUILD_DEPENDS accepted either tcsh or standalone-tcsh, and distbb was latching onto the latter and then failing trying to install it. If the package turns out to really need tcsh in some contexts, there are probably other ways to deal with this issue.
2012-06-02 22:16:09 +02:00
AIMK= ${SETENV} ${MAKE_ENV} ${CSH} -fb ${WRKSRC}/source/aimk
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
This package needs CONFIG_GUESS_OVERRIDE and CONFIG_SUB_OVERRIDE in order to build on x86_64. Noted by dmcmahill@.
2004-07-21 00:34:03 +02:00
CONFIG_GUESS_OVERRIDE= source/3rdparty/qmake/config.guess \
parallel: align variable assignments pkglint -Wall -F --only aligned --only indent -r No manual corrections.
2019-11-04 20:18:09 +01:00
source/3rdparty/qtcsh/config.guess
This package needs CONFIG_GUESS_OVERRIDE and CONFIG_SUB_OVERRIDE in order to build on x86_64. Noted by dmcmahill@.
2004-07-21 00:34:03 +02:00
CONFIG_SUB_OVERRIDE= source/3rdparty/qmake/config.sub \
parallel: align variable assignments pkglint -Wall -F --only aligned --only indent -r No manual corrections.
2019-11-04 20:18:09 +01:00
source/3rdparty/qtcsh/config.sub
This package needs CONFIG_GUESS_OVERRIDE and CONFIG_SUB_OVERRIDE in order to build on x86_64. Noted by dmcmahill@.
2004-07-21 00:34:03 +02:00
Fix installed manual pages to correctly refer to SGE rather than GE. Also fix some interpreter paths. Bump PKGREVISION.
2009-08-19 11:56:22 +02:00
REPLACE_INTERPRETER+= tclsh
REPLACE.tclsh.old= .*tclsh
REPLACE.tclsh.new= ${PREFIX}/bin/tclsh
REPLACE_FILES.tclsh= source/dist/util/resources/jsv/jsv.tcl
REPLACE_PERL+= source/dist/util/resources/jsv/jsv.pl
Update to sge 8.1.6 Version 8.1.6 ------------- * Bug fixes Version 8.1.5 ------------- * Bug fixes Version 8.1.4 ------------- Milestone version: over 1000 patches since the last from Sun * Bug fixes * Enhancements * qacct: print category information; support -A like -P ; make -u a synonym for -o; -E selects on job end times read from standard input with -f * Move manager/operator setup in startup scripts * Installation creates an environment modules file * Add monitor_qmaster.sh script * Write shepherd panic messages to syslog, not into /tmp * Add .desktop file for qmon * rpm/dpkg packaging allows building against motif (recent Debian/Fedora) * Accounting reports qmaster-enforced resource limits (only on master PE task if accounting_summary is false) * Add "smp" to the default queue PE list * install_execd doesn't check the presence of (mostly irrelevant) binaries * Add configuration for logcheck * Potentially incompatible changes * renew_all_certs.ksh re-named to renew_all_certs.sh * Expand $ja_task_id to 0 for non-array jobs * Move manager/operator setup in startup scripts * For security reasons, installation defaults for min_uid, min_gid in sge_conf(5) are now 100 without CSP. See <http://arc.liv.ac.uk/SGE/howto/sge-security.html> * RPM layout changed to put relevant ones under noarch (on RHEL6 and recent Fedora), with a separate guiinst package * Memory values can be input and output in TB or tB (possible incompatibility parsing output) * Reduce execd CPU time reading large smaps files from Linux /proc and provide USE_SMAPS in execd_params to turn it on (default now off because huge smaps are generated by some programs) * Remove redundant -verify option from qsh, qlogin (per doc) Version 8.1.3 ------------- * Bug fixes * Enhancements * Document Interix building explicitly * qstat reports array task maximum concurrency * qstatus removes [] suffix for non-array jobs if -t was requested * Read /etc/default/{sgeexecd,sgemaster} to allow customizing rc scripts * Location of daemon pid files can be specified with SGE_QMASTER_PIDFILE, SGE_EXECD_PIDFILE * Debian packaging (as an add-on, installing into /opt/sge) * Expand $sge_root and $sge_cell in the definitions of prolog and similar methods * Check in init script that shepherd will load * Add lx-armhf architecture * On Linux and NetBSD, report jobs' virtual memory usage as accurately as possible * Add -nobincheck installation option to avoid checking binaries * Add some build hooks, useful for Debian particularly. * Potentially incompatible changes * qacct prints units (might affect parsing the output) * Correct spelling of "comunication_error" in qstat XML error output * Fix problems submitting to ARs (printing times now doesn't use a days field in qstat etc.) * Java version >= 1.5 required * Lower default MAX_DYN_EC somewhat to avoid warning on typical Linux configurations * Other changes * Don't install the ckpt directory (contents obsolete) Version 8.1.2 ------------- * Bug fixes * Enhancements * Use cpusets for process containment on fairly recent Linux-based systems (see USE_CGROUPS in sge_conf(5)) * Add bootstrap build script * Make SGE template an RPM conf file * Incompatible changes * Make CRL and certificate expiry consistent Version 8.1.1 ------------- * Bug fixes * Security * Don't pass any user environment to remote startup daemons -- better fix for half of CVE-2012-0208 * Enhancements * SGE_BINDING is set in the environment for all types of binding * New jobstats(1) provides historical job summary * Berkeleydb spools can optionally be opened "private" to allow operation on NFS3 filesystems. Currently no installer support, but see bootstrap(5) and the health warning * Environment variable SGE_DRMAA_ALLOW_JOB_ERROR_STATE allows DRMAA jobs to enter the error state; see drmaa_submit(3) * Define SGE_JOBEXIT_STAT environment variable in epilog; see submit(1) * The user from which mail is sent can be configured in sge_conf(5) * Topology items are now static load values; see load_parameters(5) * qstat now prints array job dependency info * Default to support for qsort_args in sge_pe(5) * Include an example of logrotate usage * Install an "smp" PE * Distribute/document sge_share_mon(1) to print share tree * Improve install template defaults * GPU load sensor (dist/util/resources/loadsensors/gpu-loadsensor.c) * Allow building Kerberos/GSSAPI security modules against Heimdal (but GSS is still not properly usable) * Support arm and mipsel on GNU/Linux, completing the set of official Debian Linux-based ports * Support for OpenBSD (untested) * Preliminary support for Cygwin: everything builds, clients work (lightly tested), daemons need fixing * Add ja_task_id to expandable variables in ckpt_command and similar methods * distinst supports installation with install(1) for use with -local * Incompatible changes * The CA directory is now /var/lib/sgeCA instead of /var/sgeCA but installation will offer to move it [fixme] * Drop (any pretence at) support for Cray/Unicos, NEC SX, Darwin 6 * The spool format for parallel job tasks has changed from any previous version built with qsort_args (as above), which will make live upgrades from such a version fail on nodes running parallel jobs * Other changes * Extensive internal changes to improve robustness, e.g. of string-handling against buffer overruns -- somewhat error-prone and may have caused regressions; more required * Install script allows rsh et al to be omitted from binary distribution in favour of ssh Version 8.1.0 ------------- * Security fix * Prevent users other than root deleting entries with sgepasswd * Version numbering * Switch to a more logical numbering scheme now that the Univa baseline is irrelevant * Bug fixes * Other changes * Hadoop support now for a more recent Hadoop distribution (see README.BUILD) Version 8.0.0e -------------- Mostly build and security issues * Bug fixes * Security fixes The first fix is for a trivial remote root by a valid user. The others, including fixes for potential buffer overruns in daemon and setuid programs, may or may not be exploitable. * Sanitize the environment before executing remote startup programs etc. Somewhat incompatible: LD_LIBRARY_PATH etc. may need to be set differently. See the security notes in remote_startup(5) and sge_conf(5). (CVE-2012-0208, thanks to William Hay) * Don't write initial log messages in /tmp. Somewhat incompatible: initial messages now in syslog. * Avoid using mktemp. (Probably not a significant problem.) * Control core dumps under setuid etc. with SGE_ENABLE_COREDUMP. (Not normally a security issue.) * Bounds checking in replace_params * Avoid execd crash and possible overruns * Fixes for buffer overrun and other improvements for (setuid program) sgepasswd
2014-01-14 11:21:39 +01:00
REPLACE_PERL+= source/dist/util/resources/scripts/qsched
REPLACE_PERL+= source/dist/util/resources/scripts/process-scheduler-log
REPLACE_PERL+= source/dist/util/resources/scripts/jobstats
REPLACE_PERL+= source/dist/util/resources/wrappers/rshd-wrapper
Fix installed manual pages to correctly refer to SGE rather than GE. Also fix some interpreter paths. Bump PKGREVISION.
2009-08-19 11:56:22 +02:00
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
.include "../../mk/bsd.prefs.mk"
# SGE_ARCH should match the putput of ${WRKSRC}/source/dist/util/arch
# SGE_BUILDARCH should match whats in ${WRKSRC}/source/aimk
Avoid using != to define some variables .. just use :sh instead to defer evaluation until the make targets are invoked. This avoids needing ${ECHO} and ${TR} in the top-level make.
2005-04-29 01:17:53 +02:00
UPPER_OPSYS_cmd= ${ECHO} "${OPSYS}" | ${TR} a-z A-Z
UPPER_OPSYS= ${UPPER_OPSYS_cmd:sh}
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
.if ${OPSYS} == "NetBSD"
Update sge to 6.0 Update 11 Bugs fixed in SGE 6.0u11 since release 6.0u10 -------------------------------------------- scalability issue with qdel and very large array jobs loadcheck reports on a hyperthreaded CPU only one processor CSP mode auto installation: certificates are not copied to submit hosts qmon crashes when displaying about dialog sge_schedd deadlock upon schedd_job_info job_list being enabled Qmon has a ticket number limitation qmon on secondary screen crashes when "Job Control" is pressed queue status in reporting file is missing. "Modify"-Button is activated but should be grayed reporting(5) man page lacks information about sharelog records Ability to sort queue instances using each column of the queue instances table Queue request -q from sge_request can't be overridden through command line qdel on a job in deleted state does not output any information qsub -terse to just output job id qrsh man page doesn't explain which options don't work with interactive jobs Numbers in error mail too large still used usersets/project/calendar/pe/checkpoint can be removed under certain conditions remove util/sge_log_tee from distribution shell_start_mode should be documentated to be only used for batch jobs reserved usage not explained in sge_conf.5 Discrepancy between load values reported by Gridengine and from the HP-UX 64 bit env. auto installation option failed to save the install log function job_get_id_string() is not MT save and used in qmaster Broken output of job name with 'qsub -N' meaningless error in clients when reporting_param flush_time is incorrectly set remote installation of execd's need enhancement, rework, cleanup Scheduler does not write pid file in daemonize phase invalid memory access in cl_com_get_handle Qconf usage x man page inconsistency Project man page contains different attribute names. the binary check in inst_sge is wrong! Wrong exit code with qconf -sds qacct -l h=<hostname> dumps core on darwin and linux itanium inst_sge -m fails for non-root when USER variable is not set Extraneous space in qsub's "Invalid month specification." message Hybrid user/project share-tree is broken for user sharing amongst array jobs clear usage operation should implicitely trigger refresh in share-tree dialogue UNKNOWN group/owner in accouting(5) qmon's Complex Configuration Load and Save buttons did not work memory leak in sge_schedd Bugs fixed in SGE 6.0u10 since release 6.0u9 -------------------------------------------- qdel of just submitted job can't start qmaster message appears, but qmaster is started inst_sge script does not add the master host to the shadow_masters file wrong qlogin_daemon or rlogin_daemon in host conf doesn't set host and job into error state reprioritize field in qmon cluster config missing hostname resolving should not be case sensitive drmaa_version() function should return 1.0 DRMAA sessions should be persistent drmaa_control() causes illegal memory access getDrmaaImplementation() should return the same string as getDrmSystem() qconf rejects configuration, when attribute value ends with a space character during QMaster installation, creation of local database directory fails on hp11 the execd auto_install takes too long because of long delays after a parallel install block Unable to modify Advanced Settings in Configuration for Host in my cluster using qmon qacct -l h=<hostname> dump core shared library name DT_SONAME not set with libdrmaa.so Berkeley DB backup failed when using hostname with a fully qualified domain name the inst_common.sh is missing $SGE_EXECD_PORT potential security issues in cull library inst_sge -help wrongly indicates -bup/-rst works with BDB spooling only qping segfaults in ssl mode The sge_share_mon utility does not work with the automatic policy enforcement the auto uninstall execd needs a ssh deamon when the uninstall is done local accounting records for slave tasks of pe jobs contain invalid submission time DRMAA 1.0 interface need complete documentation in man pages qselect matches wrong resources which have been overridden at lower level qsh does not work if XAUTHORITY is set in root environment In certain cases jobs may stay in "t" state for 5 minutes qmaster logging "scheduler tried to remove a incomplete" ignore_fqdn is broken for the local configuration host already exists when modifying cluster settings segmentation fault with empty string qmaster performance gets throttled if qsub -sync y is used when many jobs are in the system sge_conf(5) setting 'max_u_jobs' broken if BDB spooling is used job control: sorting by different fields qmon job control: display wider default columns load formula does not recognize float as weighting factor qmaster dies when modifying slots value for queue domain when queuename is missing spooledit cannot dump USERSET objects default xterm path in arch_variables script not correct for darwin architectures qsh problems on darwin architecture because of wrong crypto lib execution daemon can crash on Linux where libnss_ldap.so uses BDB 4.2 shared library Bugs fixed in SGE 6.0u9 since release 6.0u8 ------------------------------------------- CSP mode is affected by OpenSSL Security Advisory [28th September 2006] account string does not accept the "|" character unreasonably long scheduler dispatch times if lots of projects are used in share tree unreasonably long scheduler dispatch times if lots of cluster queues are deployed in large clusters jobs with negative priority will be rejected by qmaster
2007-08-15 04:03:05 +02:00
AIMK+= -DFD_SETSIZE=2048
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
SGE_ARCH= nbsd-${MACHINE_ARCH}
Avoid using != to define some variables .. just use :sh instead to defer evaluation until the make targets are invoked. This avoids needing ${ECHO} and ${TR} in the top-level make.
2005-04-29 01:17:53 +02:00
SGE_BUILDARCH_cmd= ${ECHO} "${OPSYS}_${MACHINE_ARCH}" | ${TR} a-z A-Z
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
.elif ${OPSYS} == "FreeBSD"
SGE_ARCH= fbsd-${MACHINE_ARCH}
Avoid using != to define some variables .. just use :sh instead to defer evaluation until the make targets are invoked. This avoids needing ${ECHO} and ${TR} in the top-level make.
2005-04-29 01:17:53 +02:00
SGE_BUILDARCH_cmd= ${ECHO} "${OPSYS}_${MACHINE_ARCH}" | ${TR} a-z A-Z
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
.elif ${OPSYS} == "SunOS"
. if ${MACHINE_ARCH} == "i386"
SGE_ARCH= solaris86
. else
correctly detect sparcv9, allows this to get further on Solaris when running a 64-bit kernel.
2004-06-27 16:22:18 +02:00
_ISAINFO!= isainfo
. if !empty(_ISAINFO:Msparcv9)
SGE_ARCH= solaris64
. else
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
SGE_ARCH= solaris
correctly detect sparcv9, allows this to get further on Solaris when running a 64-bit kernel.
2004-06-27 16:22:18 +02:00
. endif
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
. endif
Avoid using != to define some variables .. just use :sh instead to defer evaluation until the make targets are invoked. This avoids needing ${ECHO} and ${TR} in the top-level make.
2005-04-29 01:17:53 +02:00
SGE_BUILDARCH_cmd= ${ECHO} "${SGE_ARCH}" | ${TR} a-z A-Z
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
.elif ${OPSYS} == "Darwin"
SGE_ARCH= darwin
SGE_BUILDARCH= DARWIN
Teach pkg about linux (only i386 at this stage).
2011-02-17 09:55:11 +01:00
.elif ${OPSYS} == "Linux"
Update to sge 8.1.6 Version 8.1.6 ------------- * Bug fixes Version 8.1.5 ------------- * Bug fixes Version 8.1.4 ------------- Milestone version: over 1000 patches since the last from Sun * Bug fixes * Enhancements * qacct: print category information; support -A like -P ; make -u a synonym for -o; -E selects on job end times read from standard input with -f * Move manager/operator setup in startup scripts * Installation creates an environment modules file * Add monitor_qmaster.sh script * Write shepherd panic messages to syslog, not into /tmp * Add .desktop file for qmon * rpm/dpkg packaging allows building against motif (recent Debian/Fedora) * Accounting reports qmaster-enforced resource limits (only on master PE task if accounting_summary is false) * Add "smp" to the default queue PE list * install_execd doesn't check the presence of (mostly irrelevant) binaries * Add configuration for logcheck * Potentially incompatible changes * renew_all_certs.ksh re-named to renew_all_certs.sh * Expand $ja_task_id to 0 for non-array jobs * Move manager/operator setup in startup scripts * For security reasons, installation defaults for min_uid, min_gid in sge_conf(5) are now 100 without CSP. See <http://arc.liv.ac.uk/SGE/howto/sge-security.html> * RPM layout changed to put relevant ones under noarch (on RHEL6 and recent Fedora), with a separate guiinst package * Memory values can be input and output in TB or tB (possible incompatibility parsing output) * Reduce execd CPU time reading large smaps files from Linux /proc and provide USE_SMAPS in execd_params to turn it on (default now off because huge smaps are generated by some programs) * Remove redundant -verify option from qsh, qlogin (per doc) Version 8.1.3 ------------- * Bug fixes * Enhancements * Document Interix building explicitly * qstat reports array task maximum concurrency * qstatus removes [] suffix for non-array jobs if -t was requested * Read /etc/default/{sgeexecd,sgemaster} to allow customizing rc scripts * Location of daemon pid files can be specified with SGE_QMASTER_PIDFILE, SGE_EXECD_PIDFILE * Debian packaging (as an add-on, installing into /opt/sge) * Expand $sge_root and $sge_cell in the definitions of prolog and similar methods * Check in init script that shepherd will load * Add lx-armhf architecture * On Linux and NetBSD, report jobs' virtual memory usage as accurately as possible * Add -nobincheck installation option to avoid checking binaries * Add some build hooks, useful for Debian particularly. * Potentially incompatible changes * qacct prints units (might affect parsing the output) * Correct spelling of "comunication_error" in qstat XML error output * Fix problems submitting to ARs (printing times now doesn't use a days field in qstat etc.) * Java version >= 1.5 required * Lower default MAX_DYN_EC somewhat to avoid warning on typical Linux configurations * Other changes * Don't install the ckpt directory (contents obsolete) Version 8.1.2 ------------- * Bug fixes * Enhancements * Use cpusets for process containment on fairly recent Linux-based systems (see USE_CGROUPS in sge_conf(5)) * Add bootstrap build script * Make SGE template an RPM conf file * Incompatible changes * Make CRL and certificate expiry consistent Version 8.1.1 ------------- * Bug fixes * Security * Don't pass any user environment to remote startup daemons -- better fix for half of CVE-2012-0208 * Enhancements * SGE_BINDING is set in the environment for all types of binding * New jobstats(1) provides historical job summary * Berkeleydb spools can optionally be opened "private" to allow operation on NFS3 filesystems. Currently no installer support, but see bootstrap(5) and the health warning * Environment variable SGE_DRMAA_ALLOW_JOB_ERROR_STATE allows DRMAA jobs to enter the error state; see drmaa_submit(3) * Define SGE_JOBEXIT_STAT environment variable in epilog; see submit(1) * The user from which mail is sent can be configured in sge_conf(5) * Topology items are now static load values; see load_parameters(5) * qstat now prints array job dependency info * Default to support for qsort_args in sge_pe(5) * Include an example of logrotate usage * Install an "smp" PE * Distribute/document sge_share_mon(1) to print share tree * Improve install template defaults * GPU load sensor (dist/util/resources/loadsensors/gpu-loadsensor.c) * Allow building Kerberos/GSSAPI security modules against Heimdal (but GSS is still not properly usable) * Support arm and mipsel on GNU/Linux, completing the set of official Debian Linux-based ports * Support for OpenBSD (untested) * Preliminary support for Cygwin: everything builds, clients work (lightly tested), daemons need fixing * Add ja_task_id to expandable variables in ckpt_command and similar methods * distinst supports installation with install(1) for use with -local * Incompatible changes * The CA directory is now /var/lib/sgeCA instead of /var/sgeCA but installation will offer to move it [fixme] * Drop (any pretence at) support for Cray/Unicos, NEC SX, Darwin 6 * The spool format for parallel job tasks has changed from any previous version built with qsort_args (as above), which will make live upgrades from such a version fail on nodes running parallel jobs * Other changes * Extensive internal changes to improve robustness, e.g. of string-handling against buffer overruns -- somewhat error-prone and may have caused regressions; more required * Install script allows rsh et al to be omitted from binary distribution in favour of ssh Version 8.1.0 ------------- * Security fix * Prevent users other than root deleting entries with sgepasswd * Version numbering * Switch to a more logical numbering scheme now that the Univa baseline is irrelevant * Bug fixes * Other changes * Hadoop support now for a more recent Hadoop distribution (see README.BUILD) Version 8.0.0e -------------- Mostly build and security issues * Bug fixes * Security fixes The first fix is for a trivial remote root by a valid user. The others, including fixes for potential buffer overruns in daemon and setuid programs, may or may not be exploitable. * Sanitize the environment before executing remote startup programs etc. Somewhat incompatible: LD_LIBRARY_PATH etc. may need to be set differently. See the security notes in remote_startup(5) and sge_conf(5). (CVE-2012-0208, thanks to William Hay) * Don't write initial log messages in /tmp. Somewhat incompatible: initial messages now in syslog. * Avoid using mktemp. (Probably not a significant problem.) * Control core dumps under setuid etc. with SGE_ENABLE_COREDUMP. (Not normally a security issue.) * Bounds checking in replace_params * Avoid execd crash and possible overruns * Fixes for buffer overrun and other improvements for (setuid program) sgepasswd
2014-01-14 11:21:39 +01:00
#AIMK+= -no-dump
Support 64bit linux.
2012-12-15 23:27:01 +01:00
. if ${MACHINE_ARCH} == "i386"
Reinstate patch-source-utilbin_Makefile (aka patch-ak) Dont install *.orig files Fix build on 64bit systems Fix arch name for Linux Bump PKGREVISION
2012-04-15 06:07:21 +02:00
SGE_ARCH= lx-x86
Teach pkg about linux (only i386 at this stage).
2011-02-17 09:55:11 +01:00
SGE_BUILDARCH= LINUX86
Support 64bit linux.
2012-12-15 23:27:01 +01:00
. else
SGE_ARCH= lx-amd64
SGE_BUILDARCH= LINUXAMD64
. endif
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
.else
Fixed pkglint warnings. The warnings are mostly quoting issues, for example MAKE_ENV+=FOO=${BAR} is changed to MAKE_ENV+=FOO=${BAR:Q}. Some other changes are outlined in http://mail-index.netbsd.org/tech-pkg/2005/12/02/0034.html
2005-12-05 21:49:47 +01:00
PKG_FAIL_REASON+= "SGE_ARCH and SGE_BUILDARCH need to be configured for your OS"
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
.endif
Avoid using != to define some variables .. just use :sh instead to defer evaluation until the make targets are invoked. This avoids needing ${ECHO} and ${TR} in the top-level make.
2005-04-29 01:17:53 +02:00
SGE_BUILDARCH?= ${SGE_BUILDARCH_cmd:sh}
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
Restructure in preparation for adding a java option.
2012-12-15 23:29:20 +01:00
JAVA_ARGS= -no-java -no-jni
#JAVA_ARGS= -no-gui-inst -no-herd
#.include "../../mk/java-vm.mk"
Update to the Son of Grid Engine 8.0.0d The Son of Grid Engine is a community project to continue Sun Grid Engine. Notable changes in Son of Grid Engine ------------------------------------- Version 8.0.0d -------------- * Bug fixes * Man and fixes * Fix building with older gcc versions * Provide load average in qstat XML output [#446, #454] * Partially back out Univa change which broke classic spooling * Fix -terse in sge_request [#777] * Other changes (possibly-incompatible) * Message fixes Version 8.0.0c -------------- * Bug fixes * Man and other documentation fixes * Build/installation fixes (particularly for Red Hat 6 and Linux 3) * Fix group ids for submitted jobs [U] * Fix default value of boolean with JSV [U] * Windows fixes for helper crashes and Vista GUI jobs [U] * Ensure parallel jobs are dispatched to the least loaded host [U] * Correct ownership of qsub -pty output file; was owned by admin user [U] * Fix format of Windows loadcheck.exe output [U] * Read from stderr even if stdout is already closed in IJS [U] * Fix PDC_INTERVAL=NEVER execd parameter [U] * Fix accounting information for Windows GUI jobs [U] * Increase default MAX_DYN_EC qmaster param [U] * Fix qsub -sync y error message and enforce MAX_DYN_EC correctly [U] * Fix job validation (-w e) behaviour [#716] [U] * Fix qrsh input redirection [U] * Avoid warning when submitting a qrsh job [U] * Print start time in qstat -j -xml output [U] * Don't raise an error changing resource request on waiting job [#806] * Don't exit 0 on error with qconf -secl or -sep * Include string.h in drmaa.h [#712] * Fix process-scheduler-log with host aliases * Enhancements * Base qmake and qtcsh on the current gmake and tcsh source [#289, #504, #832] * Support "-binding linear" and "-binding linear:slots" * Use the hwloc library for all topology information and core binding, supporting more operating systems (now: AIX, Darwin, FreeBSD, GNU/Linux, HPUX, MS Windows, OSF/1, Solaris), and more hardware types (specifically AMD Magny Cours and similar) * Add task number to execd "exceeds job ... limit" * Other changes (possibly-incompatible) * Modify default paths in build files and elsewhere [U] * Assorted message fixes * In RPMs, move qsched to qmaster package, and separate drmaa4ruby * Default to newijs in load_sge_config.sh * Default to sh, not csh for configured shell Version 8.0.0b -------------- * Bug fixes * Build/installation fixes [including #424, #1349] [(U)] * Fix execd init script [#1348] * Man and other documentation fixes [including #614, #764] [(U)] * Fix contents of admin mail properly [#1307, #1345] * Fix qalter messages for -tc * Fix build with -DSGE_PQS_API * Fix group ids for submitted jobs [U] * Enhancements * Update qsched and add man page * Other changes (possibly-incompatible) * Avoid the use of /bin/ksh [#1306] * Change installation defaults to classic spooling, not adding shadow hosts, and not JMX. [(U)] Version 8.0.0a -------------- This is roughly a superset of Univa's 8.0.0 (the V800_TAG from https://github.com/gridengine/gridengine), with thanks for that. Changes made there which haven't been included in this version: PLPA source not removed; some different build/installation defaults (e.g. for JMX); Univa/UGE "branding" (partly because trademark status is unknown); authuser not removed (for SDM and testing use), * Bug fixes * Many man and other documentation fixes [including #790, #776, #769, #733, #610, #587, #581, #459, #456, #439, #255, #1288, #797, #1271, #773] [(U)] * Some program message fixes [(U)] * Various build and installation fixes [including #761, #709, #656, #616, #546, #536, #521, #491, #438, #414, #411, #383, #381, #138, #455, #344, #438, #1311, #1272, #1273] [(U)] * Ask for keystore password twice on installation * Fix qmaster crashes with tightly integrated parallel jobs or un-discoverable qinstance [#789] [U] * Report 0 cores and sockets on unsupported Solaris hosts [U] * Fix malloc hooks which caused crashes, particularly with SuSE 11 [#792, #748, #749] [U] * Verify the pe task start user in execd in non-CSP mode [U] * Fix binding parameters parsing [U] * Fix JSV logging with multiple users submitting jobs on same submit host [U] * Fix unresponsive qmaster when modifying the global configuration in a huge cluster [U] * Speed up finishing tightly integrated jobs [U] * Check consistency of JSV binding information properly [U] * Fix broken project spooling, which caused loss of project when restarting master when using core binding [U] * Fix slotwise preemption failure to unsuspend one job per host [#775] [U] * Fix problems retrieving passwd and group information with large responses [#1295] [(U)] * Fix JSV changing default of boolean [U] * Fix ENABLE_RESCHEDULE_SLAVE=1 [U] * Allow comma in CMDNAME with Perl JSV scripts [#803] * Don't put queue into error state when supplementary group id cannot be set [#185] [U] * Don't convert LF to CRLF with qrsh -pty [U] * Fix qconf segfault on bad subordination string [U] * Fix group ids of submitted jobs [U] * Disallow -masterq with serial jobs [#155] [U] * Fix 100% CPU use by shepherd of qsh [U] * Removed unnecessary binding warning on job starts [U] * Fix qconf error reports when tmp directory has 755 permissions [U] * Fix suspending of remote process on qrsh -pty yes <cmd> on Solaris [U] * Fix starting jobs after global host changed [U] * Reject invalid load_formula value [U] * Fix handling of implicitly-requested exclusive resources [U] * Fix execd vmem reporting on 64-bit Linux [U] * Fix startup of execd on Windows Vista [U] * Set xterm's path more appropriately on GNU/Linux [#557] * Fix generation of admin email from failed jobs [#1307] * Fix some ill-formed output from qstat -xml [#314] * Fix handling of multi-line environment variables propagated to shepherd [#395] * Fix example MPI PE templates * Fix bad quoting in JSV sh library * Fix checking of consumables for parallel jobs across multiple hosts [U] * Enhancements * Additional and clarified documentation * PAM modules for ssh tight integration and access control for interactive jobs * Initial core binding support for Solaris/SPARC64 [U] * Some efficiency improvements and memory leaks fixed [U] * Ports to S/390 and PARISC GNU/Linux [U] * New complex m_thread [U] * Show topology by default in qhost [U] * qsub -pty switch [#704] [U] * Improved qmon graphics [#530] [(U)] * Include bash in default shell list [U] * A JSV that rejects all jobs [U] * Files for Scali-MPI * Ruby DRMAA implementation * Enable easy building against shared system libraries and use system openssl and bdb binaries * New scripts: "qsched" reports resource reservations; "status" wraps qstat; enable/disable submission; node-selection (idle etc.) * Restart argument for daemon init scripts * Improved efficiency of shell JSV if used with bash * Core dumps from crashing daemons enabled under Linux [U] * Example host_aliases file [#154] * Spec file for RPM packaging [#820] * Other changes (possibly-incompatible) * Show core binding by default in qstat, qhost (use -ncb for compatibility) [U] * Removed Berkeley DB RPC support (recently dropped by BDB) [U] * Changed position in pending job list for user-rescheduled jobs (exit99, qmod -rj) and OLD_RESCHEDULE_BEHAVIOR, OLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB parameters [U] * Unified GNU/Linux arch strings (lx-*, from lx24-* and lx26-*) [U] * Default to enabling core binding on GNU/Linux [U] * Removed Sun service tags support [U] * Removed obsolete SunHPCT5 files
2012-03-20 18:07:43 +01:00
# Some hacks to get it properly linked:
Reinstate patch-source-utilbin_Makefile (aka patch-ak) Dont install *.orig files Fix build on 64bit systems Fix arch name for Linux Bump PKGREVISION
2012-04-15 06:07:21 +02:00
MAKE_ENV+= SGE_ARCH=${SGE_ARCH} SGE_ROOT=${SGE_ROOT}
Update to the Son of Grid Engine 8.0.0d The Son of Grid Engine is a community project to continue Sun Grid Engine. Notable changes in Son of Grid Engine ------------------------------------- Version 8.0.0d -------------- * Bug fixes * Man and fixes * Fix building with older gcc versions * Provide load average in qstat XML output [#446, #454] * Partially back out Univa change which broke classic spooling * Fix -terse in sge_request [#777] * Other changes (possibly-incompatible) * Message fixes Version 8.0.0c -------------- * Bug fixes * Man and other documentation fixes * Build/installation fixes (particularly for Red Hat 6 and Linux 3) * Fix group ids for submitted jobs [U] * Fix default value of boolean with JSV [U] * Windows fixes for helper crashes and Vista GUI jobs [U] * Ensure parallel jobs are dispatched to the least loaded host [U] * Correct ownership of qsub -pty output file; was owned by admin user [U] * Fix format of Windows loadcheck.exe output [U] * Read from stderr even if stdout is already closed in IJS [U] * Fix PDC_INTERVAL=NEVER execd parameter [U] * Fix accounting information for Windows GUI jobs [U] * Increase default MAX_DYN_EC qmaster param [U] * Fix qsub -sync y error message and enforce MAX_DYN_EC correctly [U] * Fix job validation (-w e) behaviour [#716] [U] * Fix qrsh input redirection [U] * Avoid warning when submitting a qrsh job [U] * Print start time in qstat -j -xml output [U] * Don't raise an error changing resource request on waiting job [#806] * Don't exit 0 on error with qconf -secl or -sep * Include string.h in drmaa.h [#712] * Fix process-scheduler-log with host aliases * Enhancements * Base qmake and qtcsh on the current gmake and tcsh source [#289, #504, #832] * Support "-binding linear" and "-binding linear:slots" * Use the hwloc library for all topology information and core binding, supporting more operating systems (now: AIX, Darwin, FreeBSD, GNU/Linux, HPUX, MS Windows, OSF/1, Solaris), and more hardware types (specifically AMD Magny Cours and similar) * Add task number to execd "exceeds job ... limit" * Other changes (possibly-incompatible) * Modify default paths in build files and elsewhere [U] * Assorted message fixes * In RPMs, move qsched to qmaster package, and separate drmaa4ruby * Default to newijs in load_sge_config.sh * Default to sh, not csh for configured shell Version 8.0.0b -------------- * Bug fixes * Build/installation fixes [including #424, #1349] [(U)] * Fix execd init script [#1348] * Man and other documentation fixes [including #614, #764] [(U)] * Fix contents of admin mail properly [#1307, #1345] * Fix qalter messages for -tc * Fix build with -DSGE_PQS_API * Fix group ids for submitted jobs [U] * Enhancements * Update qsched and add man page * Other changes (possibly-incompatible) * Avoid the use of /bin/ksh [#1306] * Change installation defaults to classic spooling, not adding shadow hosts, and not JMX. [(U)] Version 8.0.0a -------------- This is roughly a superset of Univa's 8.0.0 (the V800_TAG from https://github.com/gridengine/gridengine), with thanks for that. Changes made there which haven't been included in this version: PLPA source not removed; some different build/installation defaults (e.g. for JMX); Univa/UGE "branding" (partly because trademark status is unknown); authuser not removed (for SDM and testing use), * Bug fixes * Many man and other documentation fixes [including #790, #776, #769, #733, #610, #587, #581, #459, #456, #439, #255, #1288, #797, #1271, #773] [(U)] * Some program message fixes [(U)] * Various build and installation fixes [including #761, #709, #656, #616, #546, #536, #521, #491, #438, #414, #411, #383, #381, #138, #455, #344, #438, #1311, #1272, #1273] [(U)] * Ask for keystore password twice on installation * Fix qmaster crashes with tightly integrated parallel jobs or un-discoverable qinstance [#789] [U] * Report 0 cores and sockets on unsupported Solaris hosts [U] * Fix malloc hooks which caused crashes, particularly with SuSE 11 [#792, #748, #749] [U] * Verify the pe task start user in execd in non-CSP mode [U] * Fix binding parameters parsing [U] * Fix JSV logging with multiple users submitting jobs on same submit host [U] * Fix unresponsive qmaster when modifying the global configuration in a huge cluster [U] * Speed up finishing tightly integrated jobs [U] * Check consistency of JSV binding information properly [U] * Fix broken project spooling, which caused loss of project when restarting master when using core binding [U] * Fix slotwise preemption failure to unsuspend one job per host [#775] [U] * Fix problems retrieving passwd and group information with large responses [#1295] [(U)] * Fix JSV changing default of boolean [U] * Fix ENABLE_RESCHEDULE_SLAVE=1 [U] * Allow comma in CMDNAME with Perl JSV scripts [#803] * Don't put queue into error state when supplementary group id cannot be set [#185] [U] * Don't convert LF to CRLF with qrsh -pty [U] * Fix qconf segfault on bad subordination string [U] * Fix group ids of submitted jobs [U] * Disallow -masterq with serial jobs [#155] [U] * Fix 100% CPU use by shepherd of qsh [U] * Removed unnecessary binding warning on job starts [U] * Fix qconf error reports when tmp directory has 755 permissions [U] * Fix suspending of remote process on qrsh -pty yes <cmd> on Solaris [U] * Fix starting jobs after global host changed [U] * Reject invalid load_formula value [U] * Fix handling of implicitly-requested exclusive resources [U] * Fix execd vmem reporting on 64-bit Linux [U] * Fix startup of execd on Windows Vista [U] * Set xterm's path more appropriately on GNU/Linux [#557] * Fix generation of admin email from failed jobs [#1307] * Fix some ill-formed output from qstat -xml [#314] * Fix handling of multi-line environment variables propagated to shepherd [#395] * Fix example MPI PE templates * Fix bad quoting in JSV sh library * Fix checking of consumables for parallel jobs across multiple hosts [U] * Enhancements * Additional and clarified documentation * PAM modules for ssh tight integration and access control for interactive jobs * Initial core binding support for Solaris/SPARC64 [U] * Some efficiency improvements and memory leaks fixed [U] * Ports to S/390 and PARISC GNU/Linux [U] * New complex m_thread [U] * Show topology by default in qhost [U] * qsub -pty switch [#704] [U] * Improved qmon graphics [#530] [(U)] * Include bash in default shell list [U] * A JSV that rejects all jobs [U] * Files for Scali-MPI * Ruby DRMAA implementation * Enable easy building against shared system libraries and use system openssl and bdb binaries * New scripts: "qsched" reports resource reservations; "status" wraps qstat; enable/disable submission; node-selection (idle etc.) * Restart argument for daemon init scripts * Improved efficiency of shell JSV if used with bash * Core dumps from crashing daemons enabled under Linux [U] * Example host_aliases file [#154] * Spec file for RPM packaging [#820] * Other changes (possibly-incompatible) * Show core binding by default in qstat, qhost (use -ncb for compatibility) [U] * Removed Berkeley DB RPC support (recently dropped by BDB) [U] * Changed position in pending job list for user-rescheduled jobs (exit99, qmod -rj) and OLD_RESCHEDULE_BEHAVIOR, OLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB parameters [U] * Unified GNU/Linux arch strings (lx-*, from lx24-* and lx26-*) [U] * Default to enabling core binding on GNU/Linux [U] * Removed Sun service tags support [U] * Removed obsolete SunHPCT5 files
2012-03-20 18:07:43 +01:00
Reinstate patch-source-utilbin_Makefile (aka patch-ak) Dont install *.orig files Fix build on 64bit systems Fix arch name for Linux Bump PKGREVISION
2012-04-15 06:07:21 +02:00
LDFLAGS+= ${COMPILER_RPATH_FLAG}${SGE_ROOT}/lib/${SGE_ARCH}
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
BUILDLINK_PASSTHRU_RPATHDIRS+= ${SGE_ROOT}/lib/${SGE_ARCH}
SGE_ROOT= ${PREFIX}/sge
Create directories before installing files into them.
2005-06-17 05:50:19 +02:00
INSTALLATION_DIRS= bin
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
post-patch:
@if [ "`${WRKSRC}/source/dist/util/arch`" != "${SGE_ARCH}" ]; then \
${ECHO} "ERROR: SGE_ARCH as set in the pkgsrc Makefile," ;\
${ECHO} " ${SGE_ARCH}, does not agree with that returned by" ; \
${ECHO} " ${WRKSRC}/source/dist/util/arch," ; \
${ECHO} " `${WRKSRC}/source/dist/util/arch`" ; \
${FALSE} ; \
fi
Remove mk/find-prefix.mk usage from the parallel category. The find-prefix infrastructure was required in a pkgviews world where packages installed from pkgsrc could have different installation prefixes, and this was a way for a dependency prefix to be determined. Now that pkgviews has been removed there is no longer any need for the overhead of this infrastructure. Instead we use BUILDLINK_PREFIX.pkg for dependencies pulled in via buildlink, or LOCALBASE/PREFIX where the dependency is coming from pkgsrc. Provides a reasonable performance win due to the reduction of `pkg_info -qp` calls, some of which were redundant anyway as they were duplicating the same information provided by BUILDLINK_PREFIX.pkg.
2015-11-25 13:52:26 +01:00
( ${ECHO} "set OPENSSL_HOME = ${BUILDLINK_PREFIX.openssl}" ; \
Update sge to 6.2.2.1 Grid Engine 6.2, which has undergone significant changes in qmaster to significantly improve its scalability in challenging environments, adds powerful features to the core system, introduces multi cluster support for the Accounting and Reporting Console (ARCo) and comes with a new module extending the scope of Grid Engine to a new domain of use cases: the Service Domain Manager (SDM), aka. project Hedeby allows to dynamically (re-)assign computational resources on demand. plus lots of bug fixes.
2009-05-13 23:00:25 +02:00
${ECHO} "set BERKELEYDB_HOME = ${BUILDLINK_PREFIX.db4}" ; \
${ECHO} "set BDB_INCLUDE_SUBDIR = db4" ; \
${ECHO} "set BDB_LIB_SUFFIX = 4" ; \
${ECHO} "set PERL = ${PERL5}" ) > ${WRKSRC}/source/aimk.private
Remove mk/find-prefix.mk usage from the parallel category. The find-prefix infrastructure was required in a pkgviews world where packages installed from pkgsrc could have different installation prefixes, and this was a way for a dependency prefix to be determined. Now that pkgviews has been removed there is no longer any need for the overhead of this infrastructure. Instead we use BUILDLINK_PREFIX.pkg for dependencies pulled in via buildlink, or LOCALBASE/PREFIX where the dependency is coming from pkgsrc. Provides a reasonable performance win due to the reduction of `pkg_info -qp` calls, some of which were redundant anyway as they were duplicating the same information provided by BUILDLINK_PREFIX.pkg.
2015-11-25 13:52:26 +01:00
( ${ECHO} "OPENSSLBASE=${BUILDLINK_PREFIX.openssl}" ; \
Update sge to 6.2.2.1 Grid Engine 6.2, which has undergone significant changes in qmaster to significantly improve its scalability in challenging environments, adds powerful features to the core system, introduces multi cluster support for the Accounting and Reporting Console (ARCo) and comes with a new module extending the scope of Grid Engine to a new domain of use cases: the Service Domain Manager (SDM), aka. project Hedeby allows to dynamically (re-)assign computational resources on demand. plus lots of bug fixes.
2009-05-13 23:00:25 +02:00
${ECHO} "BERKELEYDBBASE=${BUILDLINK_PREFIX.db4}" ) > ${WRKSRC}/source/distinst.private
Reinstate patch-source-utilbin_Makefile (aka patch-ak) Dont install *.orig files Fix build on 64bit systems Fix arch name for Linux Bump PKGREVISION
2012-04-15 06:07:21 +02:00
rm ${WRKSRC}/source/dist/util/*.orig
Update sge to 6.2.2.1 Grid Engine 6.2, which has undergone significant changes in qmaster to significantly improve its scalability in challenging environments, adds powerful features to the core system, introduces multi cluster support for the Accounting and Reporting Console (ARCo) and comes with a new module extending the scope of Grid Engine to a new domain of use cases: the Service Domain Manager (SDM), aka. project Hedeby allows to dynamically (re-)assign computational resources on demand. plus lots of bug fixes.
2009-05-13 23:00:25 +02:00
SUBST_CLASSES+= paths
*: Move SUBST_STAGE from post-patch to pre-configure Performing substitutions during post-patch breaks tools such as mkpatches, making it very difficult to regenerate correct patches after making changes, and often leading to substituted string replacements being committed.
2018-07-04 15:40:07 +02:00
SUBST_STAGE.paths= pre-configure
Update sge to 6.2.2.1 Grid Engine 6.2, which has undergone significant changes in qmaster to significantly improve its scalability in challenging environments, adds powerful features to the core system, introduces multi cluster support for the Accounting and Reporting Console (ARCo) and comes with a new module extending the scope of Grid Engine to a new domain of use cases: the Service Domain Manager (SDM), aka. project Hedeby allows to dynamically (re-)assign computational resources on demand. plus lots of bug fixes.
2009-05-13 23:00:25 +02:00
SUBST_FILES.paths= source/dist/util/arch_variables
Reinstate patch-source-utilbin_Makefile (aka patch-ak) Dont install *.orig files Fix build on 64bit systems Fix arch name for Linux Bump PKGREVISION
2012-04-15 06:07:21 +02:00
SUBST_SED.paths= -e 's;@rcd_dir@;${RCD_SCRIPTS_DIR};'
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
do-configure:
.for __prog__ in qmake qtcsh
${MKDIR} ${WRKSRC}/source/3rdparty/${__prog__}/${SGE_BUILDARCH}
cd ${WRKSRC}/source/3rdparty/${__prog__}/${SGE_BUILDARCH} && \
${SETENV} ${CONFIGURE_ENV} \
SGE_ARCH=`${WRKSRC}/source/dist/util/arch` \
../configure ${CONFIGURE_ARGS} --srcdir=..
.endfor
do-build:
Restructure in preparation for adding a java option.
2012-12-15 23:29:20 +01:00
cd ${WRKSRC}/source && ${AIMK} ${JAVA_ARGS} -no-hwloc -only-depend
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
cd ${WRKSRC}/source && ${SETENV} ${MAKE_ENV} ./scripts/zerodepend
Restructure in preparation for adding a java option.
2012-12-15 23:29:20 +01:00
cd ${WRKSRC}/source && ${AIMK} ${JAVA_ARGS} -no-hwloc -no-qmake -no-qtcsh depend
cd ${WRKSRC}/source && ${AIMK} ${JAVA_ARGS} -no-hwloc
cd ${WRKSRC}/source && ${AIMK} ${JAVA_ARGS} -no-hwloc -man
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
Update to sge 8.1.6 Version 8.1.6 ------------- * Bug fixes Version 8.1.5 ------------- * Bug fixes Version 8.1.4 ------------- Milestone version: over 1000 patches since the last from Sun * Bug fixes * Enhancements * qacct: print category information; support -A like -P ; make -u a synonym for -o; -E selects on job end times read from standard input with -f * Move manager/operator setup in startup scripts * Installation creates an environment modules file * Add monitor_qmaster.sh script * Write shepherd panic messages to syslog, not into /tmp * Add .desktop file for qmon * rpm/dpkg packaging allows building against motif (recent Debian/Fedora) * Accounting reports qmaster-enforced resource limits (only on master PE task if accounting_summary is false) * Add "smp" to the default queue PE list * install_execd doesn't check the presence of (mostly irrelevant) binaries * Add configuration for logcheck * Potentially incompatible changes * renew_all_certs.ksh re-named to renew_all_certs.sh * Expand $ja_task_id to 0 for non-array jobs * Move manager/operator setup in startup scripts * For security reasons, installation defaults for min_uid, min_gid in sge_conf(5) are now 100 without CSP. See <http://arc.liv.ac.uk/SGE/howto/sge-security.html> * RPM layout changed to put relevant ones under noarch (on RHEL6 and recent Fedora), with a separate guiinst package * Memory values can be input and output in TB or tB (possible incompatibility parsing output) * Reduce execd CPU time reading large smaps files from Linux /proc and provide USE_SMAPS in execd_params to turn it on (default now off because huge smaps are generated by some programs) * Remove redundant -verify option from qsh, qlogin (per doc) Version 8.1.3 ------------- * Bug fixes * Enhancements * Document Interix building explicitly * qstat reports array task maximum concurrency * qstatus removes [] suffix for non-array jobs if -t was requested * Read /etc/default/{sgeexecd,sgemaster} to allow customizing rc scripts * Location of daemon pid files can be specified with SGE_QMASTER_PIDFILE, SGE_EXECD_PIDFILE * Debian packaging (as an add-on, installing into /opt/sge) * Expand $sge_root and $sge_cell in the definitions of prolog and similar methods * Check in init script that shepherd will load * Add lx-armhf architecture * On Linux and NetBSD, report jobs' virtual memory usage as accurately as possible * Add -nobincheck installation option to avoid checking binaries * Add some build hooks, useful for Debian particularly. * Potentially incompatible changes * qacct prints units (might affect parsing the output) * Correct spelling of "comunication_error" in qstat XML error output * Fix problems submitting to ARs (printing times now doesn't use a days field in qstat etc.) * Java version >= 1.5 required * Lower default MAX_DYN_EC somewhat to avoid warning on typical Linux configurations * Other changes * Don't install the ckpt directory (contents obsolete) Version 8.1.2 ------------- * Bug fixes * Enhancements * Use cpusets for process containment on fairly recent Linux-based systems (see USE_CGROUPS in sge_conf(5)) * Add bootstrap build script * Make SGE template an RPM conf file * Incompatible changes * Make CRL and certificate expiry consistent Version 8.1.1 ------------- * Bug fixes * Security * Don't pass any user environment to remote startup daemons -- better fix for half of CVE-2012-0208 * Enhancements * SGE_BINDING is set in the environment for all types of binding * New jobstats(1) provides historical job summary * Berkeleydb spools can optionally be opened "private" to allow operation on NFS3 filesystems. Currently no installer support, but see bootstrap(5) and the health warning * Environment variable SGE_DRMAA_ALLOW_JOB_ERROR_STATE allows DRMAA jobs to enter the error state; see drmaa_submit(3) * Define SGE_JOBEXIT_STAT environment variable in epilog; see submit(1) * The user from which mail is sent can be configured in sge_conf(5) * Topology items are now static load values; see load_parameters(5) * qstat now prints array job dependency info * Default to support for qsort_args in sge_pe(5) * Include an example of logrotate usage * Install an "smp" PE * Distribute/document sge_share_mon(1) to print share tree * Improve install template defaults * GPU load sensor (dist/util/resources/loadsensors/gpu-loadsensor.c) * Allow building Kerberos/GSSAPI security modules against Heimdal (but GSS is still not properly usable) * Support arm and mipsel on GNU/Linux, completing the set of official Debian Linux-based ports * Support for OpenBSD (untested) * Preliminary support for Cygwin: everything builds, clients work (lightly tested), daemons need fixing * Add ja_task_id to expandable variables in ckpt_command and similar methods * distinst supports installation with install(1) for use with -local * Incompatible changes * The CA directory is now /var/lib/sgeCA instead of /var/sgeCA but installation will offer to move it [fixme] * Drop (any pretence at) support for Cray/Unicos, NEC SX, Darwin 6 * The spool format for parallel job tasks has changed from any previous version built with qsort_args (as above), which will make live upgrades from such a version fail on nodes running parallel jobs * Other changes * Extensive internal changes to improve robustness, e.g. of string-handling against buffer overruns -- somewhat error-prone and may have caused regressions; more required * Install script allows rsh et al to be omitted from binary distribution in favour of ssh Version 8.1.0 ------------- * Security fix * Prevent users other than root deleting entries with sgepasswd * Version numbering * Switch to a more logical numbering scheme now that the Univa baseline is irrelevant * Bug fixes * Other changes * Hadoop support now for a more recent Hadoop distribution (see README.BUILD) Version 8.0.0e -------------- Mostly build and security issues * Bug fixes * Security fixes The first fix is for a trivial remote root by a valid user. The others, including fixes for potential buffer overruns in daemon and setuid programs, may or may not be exploitable. * Sanitize the environment before executing remote startup programs etc. Somewhat incompatible: LD_LIBRARY_PATH etc. may need to be set differently. See the security notes in remote_startup(5) and sge_conf(5). (CVE-2012-0208, thanks to William Hay) * Don't write initial log messages in /tmp. Somewhat incompatible: initial messages now in syslog. * Avoid using mktemp. (Probably not a significant problem.) * Control core dumps under setuid etc. with SGE_ENABLE_COREDUMP. (Not normally a security issue.) * Bounds checking in replace_params * Avoid execd crash and possible overruns * Fixes for buffer overrun and other improvements for (setuid program) sgepasswd
2014-01-14 11:21:39 +01:00
CHECK_INTERPRETER_SKIP= sge/bin/qstatus \
Reinstate patch-source-utilbin_Makefile (aka patch-ak) Dont install *.orig files Fix build on 64bit systems Fix arch name for Linux Bump PKGREVISION
2012-04-15 06:07:21 +02:00
sge/ckpt/cpr_* \
Update to the Son of Grid Engine 8.0.0d The Son of Grid Engine is a community project to continue Sun Grid Engine. Notable changes in Son of Grid Engine ------------------------------------- Version 8.0.0d -------------- * Bug fixes * Man and fixes * Fix building with older gcc versions * Provide load average in qstat XML output [#446, #454] * Partially back out Univa change which broke classic spooling * Fix -terse in sge_request [#777] * Other changes (possibly-incompatible) * Message fixes Version 8.0.0c -------------- * Bug fixes * Man and other documentation fixes * Build/installation fixes (particularly for Red Hat 6 and Linux 3) * Fix group ids for submitted jobs [U] * Fix default value of boolean with JSV [U] * Windows fixes for helper crashes and Vista GUI jobs [U] * Ensure parallel jobs are dispatched to the least loaded host [U] * Correct ownership of qsub -pty output file; was owned by admin user [U] * Fix format of Windows loadcheck.exe output [U] * Read from stderr even if stdout is already closed in IJS [U] * Fix PDC_INTERVAL=NEVER execd parameter [U] * Fix accounting information for Windows GUI jobs [U] * Increase default MAX_DYN_EC qmaster param [U] * Fix qsub -sync y error message and enforce MAX_DYN_EC correctly [U] * Fix job validation (-w e) behaviour [#716] [U] * Fix qrsh input redirection [U] * Avoid warning when submitting a qrsh job [U] * Print start time in qstat -j -xml output [U] * Don't raise an error changing resource request on waiting job [#806] * Don't exit 0 on error with qconf -secl or -sep * Include string.h in drmaa.h [#712] * Fix process-scheduler-log with host aliases * Enhancements * Base qmake and qtcsh on the current gmake and tcsh source [#289, #504, #832] * Support "-binding linear" and "-binding linear:slots" * Use the hwloc library for all topology information and core binding, supporting more operating systems (now: AIX, Darwin, FreeBSD, GNU/Linux, HPUX, MS Windows, OSF/1, Solaris), and more hardware types (specifically AMD Magny Cours and similar) * Add task number to execd "exceeds job ... limit" * Other changes (possibly-incompatible) * Modify default paths in build files and elsewhere [U] * Assorted message fixes * In RPMs, move qsched to qmaster package, and separate drmaa4ruby * Default to newijs in load_sge_config.sh * Default to sh, not csh for configured shell Version 8.0.0b -------------- * Bug fixes * Build/installation fixes [including #424, #1349] [(U)] * Fix execd init script [#1348] * Man and other documentation fixes [including #614, #764] [(U)] * Fix contents of admin mail properly [#1307, #1345] * Fix qalter messages for -tc * Fix build with -DSGE_PQS_API * Fix group ids for submitted jobs [U] * Enhancements * Update qsched and add man page * Other changes (possibly-incompatible) * Avoid the use of /bin/ksh [#1306] * Change installation defaults to classic spooling, not adding shadow hosts, and not JMX. [(U)] Version 8.0.0a -------------- This is roughly a superset of Univa's 8.0.0 (the V800_TAG from https://github.com/gridengine/gridengine), with thanks for that. Changes made there which haven't been included in this version: PLPA source not removed; some different build/installation defaults (e.g. for JMX); Univa/UGE "branding" (partly because trademark status is unknown); authuser not removed (for SDM and testing use), * Bug fixes * Many man and other documentation fixes [including #790, #776, #769, #733, #610, #587, #581, #459, #456, #439, #255, #1288, #797, #1271, #773] [(U)] * Some program message fixes [(U)] * Various build and installation fixes [including #761, #709, #656, #616, #546, #536, #521, #491, #438, #414, #411, #383, #381, #138, #455, #344, #438, #1311, #1272, #1273] [(U)] * Ask for keystore password twice on installation * Fix qmaster crashes with tightly integrated parallel jobs or un-discoverable qinstance [#789] [U] * Report 0 cores and sockets on unsupported Solaris hosts [U] * Fix malloc hooks which caused crashes, particularly with SuSE 11 [#792, #748, #749] [U] * Verify the pe task start user in execd in non-CSP mode [U] * Fix binding parameters parsing [U] * Fix JSV logging with multiple users submitting jobs on same submit host [U] * Fix unresponsive qmaster when modifying the global configuration in a huge cluster [U] * Speed up finishing tightly integrated jobs [U] * Check consistency of JSV binding information properly [U] * Fix broken project spooling, which caused loss of project when restarting master when using core binding [U] * Fix slotwise preemption failure to unsuspend one job per host [#775] [U] * Fix problems retrieving passwd and group information with large responses [#1295] [(U)] * Fix JSV changing default of boolean [U] * Fix ENABLE_RESCHEDULE_SLAVE=1 [U] * Allow comma in CMDNAME with Perl JSV scripts [#803] * Don't put queue into error state when supplementary group id cannot be set [#185] [U] * Don't convert LF to CRLF with qrsh -pty [U] * Fix qconf segfault on bad subordination string [U] * Fix group ids of submitted jobs [U] * Disallow -masterq with serial jobs [#155] [U] * Fix 100% CPU use by shepherd of qsh [U] * Removed unnecessary binding warning on job starts [U] * Fix qconf error reports when tmp directory has 755 permissions [U] * Fix suspending of remote process on qrsh -pty yes <cmd> on Solaris [U] * Fix starting jobs after global host changed [U] * Reject invalid load_formula value [U] * Fix handling of implicitly-requested exclusive resources [U] * Fix execd vmem reporting on 64-bit Linux [U] * Fix startup of execd on Windows Vista [U] * Set xterm's path more appropriately on GNU/Linux [#557] * Fix generation of admin email from failed jobs [#1307] * Fix some ill-formed output from qstat -xml [#314] * Fix handling of multi-line environment variables propagated to shepherd [#395] * Fix example MPI PE templates * Fix bad quoting in JSV sh library * Fix checking of consumables for parallel jobs across multiple hosts [U] * Enhancements * Additional and clarified documentation * PAM modules for ssh tight integration and access control for interactive jobs * Initial core binding support for Solaris/SPARC64 [U] * Some efficiency improvements and memory leaks fixed [U] * Ports to S/390 and PARISC GNU/Linux [U] * New complex m_thread [U] * Show topology by default in qhost [U] * qsub -pty switch [#704] [U] * Improved qmon graphics [#530] [(U)] * Include bash in default shell list [U] * A JSV that rejects all jobs [U] * Files for Scali-MPI * Ruby DRMAA implementation * Enable easy building against shared system libraries and use system openssl and bdb binaries * New scripts: "qsched" reports resource reservations; "status" wraps qstat; enable/disable submission; node-selection (idle etc.) * Restart argument for daemon init scripts * Improved efficiency of shell JSV if used with bash * Core dumps from crashing daemons enabled under Linux [U] * Example host_aliases file [#154] * Spec file for RPM packaging [#820] * Other changes (possibly-incompatible) * Show core binding by default in qstat, qhost (use -ncb for compatibility) [U] * Removed Berkeley DB RPC support (recently dropped by BDB) [U] * Changed position in pending job list for user-rescheduled jobs (exit99, qmod -rj) and OLD_RESCHEDULE_BEHAVIOR, OLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB parameters [U] * Unified GNU/Linux arch strings (lx-*, from lx24-* and lx26-*) [U] * Default to enabling core binding on GNU/Linux [U] * Removed Sun service tags support [U] * Removed obsolete SunHPCT5 files
2012-03-20 18:07:43 +01:00
sge/examples/drmaa/ruby/* \
sge/hadoop/pestart.sh \
sge/hadoop/pestop.sh \
sge/hadoop/setup.pl \
sge/hadoop/wait.sh \
Reinstate patch-source-utilbin_Makefile (aka patch-ak) Dont install *.orig files Fix build on 64bit systems Fix arch name for Linux Bump PKGREVISION
2012-04-15 06:07:21 +02:00
sge/mpi/myrinet/* \
Update to the Son of Grid Engine 8.0.0d The Son of Grid Engine is a community project to continue Sun Grid Engine. Notable changes in Son of Grid Engine ------------------------------------- Version 8.0.0d -------------- * Bug fixes * Man and fixes * Fix building with older gcc versions * Provide load average in qstat XML output [#446, #454] * Partially back out Univa change which broke classic spooling * Fix -terse in sge_request [#777] * Other changes (possibly-incompatible) * Message fixes Version 8.0.0c -------------- * Bug fixes * Man and other documentation fixes * Build/installation fixes (particularly for Red Hat 6 and Linux 3) * Fix group ids for submitted jobs [U] * Fix default value of boolean with JSV [U] * Windows fixes for helper crashes and Vista GUI jobs [U] * Ensure parallel jobs are dispatched to the least loaded host [U] * Correct ownership of qsub -pty output file; was owned by admin user [U] * Fix format of Windows loadcheck.exe output [U] * Read from stderr even if stdout is already closed in IJS [U] * Fix PDC_INTERVAL=NEVER execd parameter [U] * Fix accounting information for Windows GUI jobs [U] * Increase default MAX_DYN_EC qmaster param [U] * Fix qsub -sync y error message and enforce MAX_DYN_EC correctly [U] * Fix job validation (-w e) behaviour [#716] [U] * Fix qrsh input redirection [U] * Avoid warning when submitting a qrsh job [U] * Print start time in qstat -j -xml output [U] * Don't raise an error changing resource request on waiting job [#806] * Don't exit 0 on error with qconf -secl or -sep * Include string.h in drmaa.h [#712] * Fix process-scheduler-log with host aliases * Enhancements * Base qmake and qtcsh on the current gmake and tcsh source [#289, #504, #832] * Support "-binding linear" and "-binding linear:slots" * Use the hwloc library for all topology information and core binding, supporting more operating systems (now: AIX, Darwin, FreeBSD, GNU/Linux, HPUX, MS Windows, OSF/1, Solaris), and more hardware types (specifically AMD Magny Cours and similar) * Add task number to execd "exceeds job ... limit" * Other changes (possibly-incompatible) * Modify default paths in build files and elsewhere [U] * Assorted message fixes * In RPMs, move qsched to qmaster package, and separate drmaa4ruby * Default to newijs in load_sge_config.sh * Default to sh, not csh for configured shell Version 8.0.0b -------------- * Bug fixes * Build/installation fixes [including #424, #1349] [(U)] * Fix execd init script [#1348] * Man and other documentation fixes [including #614, #764] [(U)] * Fix contents of admin mail properly [#1307, #1345] * Fix qalter messages for -tc * Fix build with -DSGE_PQS_API * Fix group ids for submitted jobs [U] * Enhancements * Update qsched and add man page * Other changes (possibly-incompatible) * Avoid the use of /bin/ksh [#1306] * Change installation defaults to classic spooling, not adding shadow hosts, and not JMX. [(U)] Version 8.0.0a -------------- This is roughly a superset of Univa's 8.0.0 (the V800_TAG from https://github.com/gridengine/gridengine), with thanks for that. Changes made there which haven't been included in this version: PLPA source not removed; some different build/installation defaults (e.g. for JMX); Univa/UGE "branding" (partly because trademark status is unknown); authuser not removed (for SDM and testing use), * Bug fixes * Many man and other documentation fixes [including #790, #776, #769, #733, #610, #587, #581, #459, #456, #439, #255, #1288, #797, #1271, #773] [(U)] * Some program message fixes [(U)] * Various build and installation fixes [including #761, #709, #656, #616, #546, #536, #521, #491, #438, #414, #411, #383, #381, #138, #455, #344, #438, #1311, #1272, #1273] [(U)] * Ask for keystore password twice on installation * Fix qmaster crashes with tightly integrated parallel jobs or un-discoverable qinstance [#789] [U] * Report 0 cores and sockets on unsupported Solaris hosts [U] * Fix malloc hooks which caused crashes, particularly with SuSE 11 [#792, #748, #749] [U] * Verify the pe task start user in execd in non-CSP mode [U] * Fix binding parameters parsing [U] * Fix JSV logging with multiple users submitting jobs on same submit host [U] * Fix unresponsive qmaster when modifying the global configuration in a huge cluster [U] * Speed up finishing tightly integrated jobs [U] * Check consistency of JSV binding information properly [U] * Fix broken project spooling, which caused loss of project when restarting master when using core binding [U] * Fix slotwise preemption failure to unsuspend one job per host [#775] [U] * Fix problems retrieving passwd and group information with large responses [#1295] [(U)] * Fix JSV changing default of boolean [U] * Fix ENABLE_RESCHEDULE_SLAVE=1 [U] * Allow comma in CMDNAME with Perl JSV scripts [#803] * Don't put queue into error state when supplementary group id cannot be set [#185] [U] * Don't convert LF to CRLF with qrsh -pty [U] * Fix qconf segfault on bad subordination string [U] * Fix group ids of submitted jobs [U] * Disallow -masterq with serial jobs [#155] [U] * Fix 100% CPU use by shepherd of qsh [U] * Removed unnecessary binding warning on job starts [U] * Fix qconf error reports when tmp directory has 755 permissions [U] * Fix suspending of remote process on qrsh -pty yes <cmd> on Solaris [U] * Fix starting jobs after global host changed [U] * Reject invalid load_formula value [U] * Fix handling of implicitly-requested exclusive resources [U] * Fix execd vmem reporting on 64-bit Linux [U] * Fix startup of execd on Windows Vista [U] * Set xterm's path more appropriately on GNU/Linux [#557] * Fix generation of admin email from failed jobs [#1307] * Fix some ill-formed output from qstat -xml [#314] * Fix handling of multi-line environment variables propagated to shepherd [#395] * Fix example MPI PE templates * Fix bad quoting in JSV sh library * Fix checking of consumables for parallel jobs across multiple hosts [U] * Enhancements * Additional and clarified documentation * PAM modules for ssh tight integration and access control for interactive jobs * Initial core binding support for Solaris/SPARC64 [U] * Some efficiency improvements and memory leaks fixed [U] * Ports to S/390 and PARISC GNU/Linux [U] * New complex m_thread [U] * Show topology by default in qhost [U] * qsub -pty switch [#704] [U] * Improved qmon graphics [#530] [(U)] * Include bash in default shell list [U] * A JSV that rejects all jobs [U] * Files for Scali-MPI * Ruby DRMAA implementation * Enable easy building against shared system libraries and use system openssl and bdb binaries * New scripts: "qsched" reports resource reservations; "status" wraps qstat; enable/disable submission; node-selection (idle etc.) * Restart argument for daemon init scripts * Improved efficiency of shell JSV if used with bash * Core dumps from crashing daemons enabled under Linux [U] * Example host_aliases file [#154] * Spec file for RPM packaging [#820] * Other changes (possibly-incompatible) * Show core binding by default in qstat, qhost (use -ncb for compatibility) [U] * Removed Berkeley DB RPC support (recently dropped by BDB) [U] * Changed position in pending job list for user-rescheduled jobs (exit99, qmod -rj) and OLD_RESCHEDULE_BEHAVIOR, OLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB parameters [U] * Unified GNU/Linux arch strings (lx-*, from lx24-* and lx26-*) [U] * Default to enabling core binding on GNU/Linux [U] * Removed Sun service tags support [U] * Removed obsolete SunHPCT5 files
2012-03-20 18:07:43 +01:00
sge/util/resources/drmaa4ruby/* \
sge/util/resources/drmaa4ruby/samples/* \
Update to sge 8.1.6 Version 8.1.6 ------------- * Bug fixes Version 8.1.5 ------------- * Bug fixes Version 8.1.4 ------------- Milestone version: over 1000 patches since the last from Sun * Bug fixes * Enhancements * qacct: print category information; support -A like -P ; make -u a synonym for -o; -E selects on job end times read from standard input with -f * Move manager/operator setup in startup scripts * Installation creates an environment modules file * Add monitor_qmaster.sh script * Write shepherd panic messages to syslog, not into /tmp * Add .desktop file for qmon * rpm/dpkg packaging allows building against motif (recent Debian/Fedora) * Accounting reports qmaster-enforced resource limits (only on master PE task if accounting_summary is false) * Add "smp" to the default queue PE list * install_execd doesn't check the presence of (mostly irrelevant) binaries * Add configuration for logcheck * Potentially incompatible changes * renew_all_certs.ksh re-named to renew_all_certs.sh * Expand $ja_task_id to 0 for non-array jobs * Move manager/operator setup in startup scripts * For security reasons, installation defaults for min_uid, min_gid in sge_conf(5) are now 100 without CSP. See <http://arc.liv.ac.uk/SGE/howto/sge-security.html> * RPM layout changed to put relevant ones under noarch (on RHEL6 and recent Fedora), with a separate guiinst package * Memory values can be input and output in TB or tB (possible incompatibility parsing output) * Reduce execd CPU time reading large smaps files from Linux /proc and provide USE_SMAPS in execd_params to turn it on (default now off because huge smaps are generated by some programs) * Remove redundant -verify option from qsh, qlogin (per doc) Version 8.1.3 ------------- * Bug fixes * Enhancements * Document Interix building explicitly * qstat reports array task maximum concurrency * qstatus removes [] suffix for non-array jobs if -t was requested * Read /etc/default/{sgeexecd,sgemaster} to allow customizing rc scripts * Location of daemon pid files can be specified with SGE_QMASTER_PIDFILE, SGE_EXECD_PIDFILE * Debian packaging (as an add-on, installing into /opt/sge) * Expand $sge_root and $sge_cell in the definitions of prolog and similar methods * Check in init script that shepherd will load * Add lx-armhf architecture * On Linux and NetBSD, report jobs' virtual memory usage as accurately as possible * Add -nobincheck installation option to avoid checking binaries * Add some build hooks, useful for Debian particularly. * Potentially incompatible changes * qacct prints units (might affect parsing the output) * Correct spelling of "comunication_error" in qstat XML error output * Fix problems submitting to ARs (printing times now doesn't use a days field in qstat etc.) * Java version >= 1.5 required * Lower default MAX_DYN_EC somewhat to avoid warning on typical Linux configurations * Other changes * Don't install the ckpt directory (contents obsolete) Version 8.1.2 ------------- * Bug fixes * Enhancements * Use cpusets for process containment on fairly recent Linux-based systems (see USE_CGROUPS in sge_conf(5)) * Add bootstrap build script * Make SGE template an RPM conf file * Incompatible changes * Make CRL and certificate expiry consistent Version 8.1.1 ------------- * Bug fixes * Security * Don't pass any user environment to remote startup daemons -- better fix for half of CVE-2012-0208 * Enhancements * SGE_BINDING is set in the environment for all types of binding * New jobstats(1) provides historical job summary * Berkeleydb spools can optionally be opened "private" to allow operation on NFS3 filesystems. Currently no installer support, but see bootstrap(5) and the health warning * Environment variable SGE_DRMAA_ALLOW_JOB_ERROR_STATE allows DRMAA jobs to enter the error state; see drmaa_submit(3) * Define SGE_JOBEXIT_STAT environment variable in epilog; see submit(1) * The user from which mail is sent can be configured in sge_conf(5) * Topology items are now static load values; see load_parameters(5) * qstat now prints array job dependency info * Default to support for qsort_args in sge_pe(5) * Include an example of logrotate usage * Install an "smp" PE * Distribute/document sge_share_mon(1) to print share tree * Improve install template defaults * GPU load sensor (dist/util/resources/loadsensors/gpu-loadsensor.c) * Allow building Kerberos/GSSAPI security modules against Heimdal (but GSS is still not properly usable) * Support arm and mipsel on GNU/Linux, completing the set of official Debian Linux-based ports * Support for OpenBSD (untested) * Preliminary support for Cygwin: everything builds, clients work (lightly tested), daemons need fixing * Add ja_task_id to expandable variables in ckpt_command and similar methods * distinst supports installation with install(1) for use with -local * Incompatible changes * The CA directory is now /var/lib/sgeCA instead of /var/sgeCA but installation will offer to move it [fixme] * Drop (any pretence at) support for Cray/Unicos, NEC SX, Darwin 6 * The spool format for parallel job tasks has changed from any previous version built with qsort_args (as above), which will make live upgrades from such a version fail on nodes running parallel jobs * Other changes * Extensive internal changes to improve robustness, e.g. of string-handling against buffer overruns -- somewhat error-prone and may have caused regressions; more required * Install script allows rsh et al to be omitted from binary distribution in favour of ssh Version 8.1.0 ------------- * Security fix * Prevent users other than root deleting entries with sgepasswd * Version numbering * Switch to a more logical numbering scheme now that the Univa baseline is irrelevant * Bug fixes * Other changes * Hadoop support now for a more recent Hadoop distribution (see README.BUILD) Version 8.0.0e -------------- Mostly build and security issues * Bug fixes * Security fixes The first fix is for a trivial remote root by a valid user. The others, including fixes for potential buffer overruns in daemon and setuid programs, may or may not be exploitable. * Sanitize the environment before executing remote startup programs etc. Somewhat incompatible: LD_LIBRARY_PATH etc. may need to be set differently. See the security notes in remote_startup(5) and sge_conf(5). (CVE-2012-0208, thanks to William Hay) * Don't write initial log messages in /tmp. Somewhat incompatible: initial messages now in syslog. * Avoid using mktemp. (Probably not a significant problem.) * Control core dumps under setuid etc. with SGE_ENABLE_COREDUMP. (Not normally a security issue.) * Bounds checking in replace_params * Avoid execd crash and possible overruns * Fixes for buffer overrun and other improvements for (setuid program) sgepasswd
2014-01-14 11:21:39 +01:00
sge/util/resources/jsv/jsv.sh \
sge/util/resources/loadsensors/interix-loadsensor.sh
Update to the Son of Grid Engine 8.0.0d The Son of Grid Engine is a community project to continue Sun Grid Engine. Notable changes in Son of Grid Engine ------------------------------------- Version 8.0.0d -------------- * Bug fixes * Man and fixes * Fix building with older gcc versions * Provide load average in qstat XML output [#446, #454] * Partially back out Univa change which broke classic spooling * Fix -terse in sge_request [#777] * Other changes (possibly-incompatible) * Message fixes Version 8.0.0c -------------- * Bug fixes * Man and other documentation fixes * Build/installation fixes (particularly for Red Hat 6 and Linux 3) * Fix group ids for submitted jobs [U] * Fix default value of boolean with JSV [U] * Windows fixes for helper crashes and Vista GUI jobs [U] * Ensure parallel jobs are dispatched to the least loaded host [U] * Correct ownership of qsub -pty output file; was owned by admin user [U] * Fix format of Windows loadcheck.exe output [U] * Read from stderr even if stdout is already closed in IJS [U] * Fix PDC_INTERVAL=NEVER execd parameter [U] * Fix accounting information for Windows GUI jobs [U] * Increase default MAX_DYN_EC qmaster param [U] * Fix qsub -sync y error message and enforce MAX_DYN_EC correctly [U] * Fix job validation (-w e) behaviour [#716] [U] * Fix qrsh input redirection [U] * Avoid warning when submitting a qrsh job [U] * Print start time in qstat -j -xml output [U] * Don't raise an error changing resource request on waiting job [#806] * Don't exit 0 on error with qconf -secl or -sep * Include string.h in drmaa.h [#712] * Fix process-scheduler-log with host aliases * Enhancements * Base qmake and qtcsh on the current gmake and tcsh source [#289, #504, #832] * Support "-binding linear" and "-binding linear:slots" * Use the hwloc library for all topology information and core binding, supporting more operating systems (now: AIX, Darwin, FreeBSD, GNU/Linux, HPUX, MS Windows, OSF/1, Solaris), and more hardware types (specifically AMD Magny Cours and similar) * Add task number to execd "exceeds job ... limit" * Other changes (possibly-incompatible) * Modify default paths in build files and elsewhere [U] * Assorted message fixes * In RPMs, move qsched to qmaster package, and separate drmaa4ruby * Default to newijs in load_sge_config.sh * Default to sh, not csh for configured shell Version 8.0.0b -------------- * Bug fixes * Build/installation fixes [including #424, #1349] [(U)] * Fix execd init script [#1348] * Man and other documentation fixes [including #614, #764] [(U)] * Fix contents of admin mail properly [#1307, #1345] * Fix qalter messages for -tc * Fix build with -DSGE_PQS_API * Fix group ids for submitted jobs [U] * Enhancements * Update qsched and add man page * Other changes (possibly-incompatible) * Avoid the use of /bin/ksh [#1306] * Change installation defaults to classic spooling, not adding shadow hosts, and not JMX. [(U)] Version 8.0.0a -------------- This is roughly a superset of Univa's 8.0.0 (the V800_TAG from https://github.com/gridengine/gridengine), with thanks for that. Changes made there which haven't been included in this version: PLPA source not removed; some different build/installation defaults (e.g. for JMX); Univa/UGE "branding" (partly because trademark status is unknown); authuser not removed (for SDM and testing use), * Bug fixes * Many man and other documentation fixes [including #790, #776, #769, #733, #610, #587, #581, #459, #456, #439, #255, #1288, #797, #1271, #773] [(U)] * Some program message fixes [(U)] * Various build and installation fixes [including #761, #709, #656, #616, #546, #536, #521, #491, #438, #414, #411, #383, #381, #138, #455, #344, #438, #1311, #1272, #1273] [(U)] * Ask for keystore password twice on installation * Fix qmaster crashes with tightly integrated parallel jobs or un-discoverable qinstance [#789] [U] * Report 0 cores and sockets on unsupported Solaris hosts [U] * Fix malloc hooks which caused crashes, particularly with SuSE 11 [#792, #748, #749] [U] * Verify the pe task start user in execd in non-CSP mode [U] * Fix binding parameters parsing [U] * Fix JSV logging with multiple users submitting jobs on same submit host [U] * Fix unresponsive qmaster when modifying the global configuration in a huge cluster [U] * Speed up finishing tightly integrated jobs [U] * Check consistency of JSV binding information properly [U] * Fix broken project spooling, which caused loss of project when restarting master when using core binding [U] * Fix slotwise preemption failure to unsuspend one job per host [#775] [U] * Fix problems retrieving passwd and group information with large responses [#1295] [(U)] * Fix JSV changing default of boolean [U] * Fix ENABLE_RESCHEDULE_SLAVE=1 [U] * Allow comma in CMDNAME with Perl JSV scripts [#803] * Don't put queue into error state when supplementary group id cannot be set [#185] [U] * Don't convert LF to CRLF with qrsh -pty [U] * Fix qconf segfault on bad subordination string [U] * Fix group ids of submitted jobs [U] * Disallow -masterq with serial jobs [#155] [U] * Fix 100% CPU use by shepherd of qsh [U] * Removed unnecessary binding warning on job starts [U] * Fix qconf error reports when tmp directory has 755 permissions [U] * Fix suspending of remote process on qrsh -pty yes <cmd> on Solaris [U] * Fix starting jobs after global host changed [U] * Reject invalid load_formula value [U] * Fix handling of implicitly-requested exclusive resources [U] * Fix execd vmem reporting on 64-bit Linux [U] * Fix startup of execd on Windows Vista [U] * Set xterm's path more appropriately on GNU/Linux [#557] * Fix generation of admin email from failed jobs [#1307] * Fix some ill-formed output from qstat -xml [#314] * Fix handling of multi-line environment variables propagated to shepherd [#395] * Fix example MPI PE templates * Fix bad quoting in JSV sh library * Fix checking of consumables for parallel jobs across multiple hosts [U] * Enhancements * Additional and clarified documentation * PAM modules for ssh tight integration and access control for interactive jobs * Initial core binding support for Solaris/SPARC64 [U] * Some efficiency improvements and memory leaks fixed [U] * Ports to S/390 and PARISC GNU/Linux [U] * New complex m_thread [U] * Show topology by default in qhost [U] * qsub -pty switch [#704] [U] * Improved qmon graphics [#530] [(U)] * Include bash in default shell list [U] * A JSV that rejects all jobs [U] * Files for Scali-MPI * Ruby DRMAA implementation * Enable easy building against shared system libraries and use system openssl and bdb binaries * New scripts: "qsched" reports resource reservations; "status" wraps qstat; enable/disable submission; node-selection (idle etc.) * Restart argument for daemon init scripts * Improved efficiency of shell JSV if used with bash * Core dumps from crashing daemons enabled under Linux [U] * Example host_aliases file [#154] * Spec file for RPM packaging [#820] * Other changes (possibly-incompatible) * Show core binding by default in qstat, qhost (use -ncb for compatibility) [U] * Removed Berkeley DB RPC support (recently dropped by BDB) [U] * Changed position in pending job list for user-rescheduled jobs (exit99, qmod -rj) and OLD_RESCHEDULE_BEHAVIOR, OLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB parameters [U] * Unified GNU/Linux arch strings (lx-*, from lx24-* and lx26-*) [U] * Default to enabling core binding on GNU/Linux [U] * Removed Sun service tags support [U] * Removed obsolete SunHPCT5 files
2012-03-20 18:07:43 +01:00
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
do-install:
Bugs fixed in SGE 6.1u3 since release 6.1u2 ------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 376 4743006 problem with floating point job resource limits 1909 6353628 information provided by qstat -j and qstat -j -xml are not equivalent 2076 6440408 qstat -j messages disagree between plain, XML output 2077 6440412 qstat -j -xml messages incomplete 2138 6506667 forbid deletion of global config values 2194 6527836 authuser binary returns unusable error message! 2249 6568575 SGE does not work if primary group entry is too big in groups map 2270 6575720 ENABLE_ADDGRP_KILL is missing from sge_conf(5) 2272 6575727 sge_shadowd(8) man page is missing some env vars 2274 6564461 Duplicate scheduling info messages for reservation jobs 2276 6575731 share_tree(5) doesn't explain type field 2283 6565821 Oracle, Postgres DWB should prompt for tablespace where indexes and tables should be created 2293 6569088 Resource reservation broken for sequential jobs depending on RQS specified for subset of queues only 2303 6571749 parallel resource reservation broken when non-queue instance based quotas limits apply 2323 6576153 Creating a userset with NONE as a type results in a core dump 2327 6578213 qconf -(A,D,M,R)attr dumps core when the supplied file is empty 2328 6579232 high scheduler dispatching time with many sequential resource reservation jobs and resource quotas 2336 6287501 rctemplates lack of requirement 2338 6585721 Parallel RR broken if jobs wait for queue slots and no RQS configured 2342 6590010 Original primary group vanishes after newgrp command (USE_QSUB_GID=true) 2344 6590079 Resource reservation broken with sequences of identical jobs differing only in their -R y|n 2346 6604155 qmon binary job submit is broken 2351 6597463 qsub -t 1-N:N creates a normal job with one task 2352 6594665 Installation fails on Linux with glibc 2.6 2353 6597423 commit method of UnixLoginModule does not report RuntimeExceptions 2356 6600619 Userset spooling in classic mode is broken 2367 6597547 qdel does not recognize wc_job_range_list as it is defined 2369 6577034 Several qconf options display only single message when a list of messages should be printed 2372 6469494 clients should issue a more explicit error message when qmaster is busy 2374 6589459 Expose the availability of keyword "none" in the manual page of calendar_conf 2382 6569862 Unset old_value out of the scope 2383 6553062 qconf -mc accepts erroneous resource entries without an urgency; qmon gives (poor) error message 2387 6614041 Multiple occurrence of a name in RQS limit definition break classic spooling 2392 6614108 Specifying more than one drmaa_v_env attribute causes spurious error msg 2394 6608259 scheduler prints empty line in messages file after every 'sge_mirror' logging 2396 6608236 scheduling of parallel jobs does not respect consumables, if consumable is referenced in rqs 2400 6564543 sge_shepherd should exit if it cannot write to any of its essential files 2401 6617450 add option to reporting_params for switching off writing of consumables 2404 6618328 qmon displays wrong string for queue filtering 2406 6596931 Incorrect messages in qconf command 2407 6618619 the restore feature does not delete old configuration before restoring 2409 6619016 removing parameters from the reporting_params will not fallback to the default 2410 6619657 qmod -e|-d '*' times out in large clusters 2411 6619662 qhost becomes sluggish in large clusters 2414 6618599 Long running jobs cause incorrect usage summary for ARCo database 2415 6620930 ARCO view_accounting filters out parallel job usage incorrectly 2416 6621482 ju_exit_status should provide means to recognize the intermediate record 2417 6622842 the start_time field in intermediate accounting records is incorrect 2418 6588743 qrsh fails with "connection refused" error message 2419 6391244 qstat -ext reports wrong usage as compared to other commands such as qstat -t or qstat -j 2424 6620253 During the installation the admin user should create web.xml file 2428 6630268 upgrade from 6.0u2 and higher to 6.1u2 and higher does not work 2435 6599335 inst_sge help output for -upd switch is incorrect Bugs fixed in SGE 6.1u2 since release 6.1u1 ------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 6590960 Man pages show the wrong version number 2345 6590574 resource quota can prevent dispatching of jobs that requests no resource in this quota 2343 6589807 newline missing from "illegal debug level format" message 2338 6585721 Parallel RR broken if jobs wait for queue slots and no RQS configured 2334 6584632 user/system/operator hold state combinations cause strange qstat output Bugs fixed in SGE 6.1u1 since release 6.1 ----------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 2323 6576153 Creating a userset with NONE as a type results in a core dump 2317 6574565 Oralce, Postgres FOREIGN KEY fields need to be indexed - 6573980 'qconf -help' suggests usage of patterns in user_list which is not true 2316 6573508 qrsh with ssh causes job to go in error state when Ctrl-C is pressed 2308 6572803 qhost -xml lacks '>' with initial qhost tag 2309 6572801 sge_queue_values definition does not contain PRIMARY KEY 2321 6571714 Inadequate error message when qconf -sstree is run when no share tree is configuredIf no share tree 2241 6568712 util/arch has problem recognizing libc version number with comma 2292 6568578 6.1 upgrade procedure shall exit when there are jobs in the cluster 2249 6568575 SGE does not work if primary group entry is too big in groups map 2284 6565841 Oracle: rollback segments keep filling up, Postgres: delete query keeps running 2306 6564592 SGE 6.1 upgrade procedure is broken when using the classic qmaster spooling 2275 6564503 sge_schedd deadlock upon schedd_job_info job_list being enabled 2250 6558006 qmaster may crash with projects or usersets used in RQS 2243 6555744 qmon crashes when displaying about dialog 2248 6554313 add -u <user> to scheduler category only if there is a resource quota for the user 2238 6551568 need faster resource quota matchmaking and more concise job info messages - 6550718 qstat -j lacks resource quota info messages in case of "incomplete" resource quotas 2296 6548455 csp mode installation, using /etc/services, qmaster is not starting! 2232 6546807 qhost -j -xml does not work 2325 6542987 drmaa_run_job(3) raises error if drmaa_native_specification has leading spaces 2239 6542137 use of hostgroups in resource quotas is less performant than the full list of hosts - 6541085 NFS write error on N1GE trace file 2300 6539199 qquota(1) filtering broken for project and pe if -P/-pe switch is not used 2299 6536039 sgeremoterun not working 2201 6529974 Use of MORE fails on some architectures - 6528949 inst_sge -ux uninstallation of exechost tries to delete local spooldir, even it isn't configured! 2191 6525883 qstat -s hX filtering is broken on darwin 2189 6525375 qacct ignores jobs in output 2320 6513115 in qmon, under calendar configuration, it is possible to modify even if no calendar exists 2326 6506661 sge_conf(5), description for rlogin_daemon and qlogin_daemon is wrong 2307 6433628 qconf -sq all.q@myhost produces no value at all for complex_values (not even NONE) 2289 6565951 Qmon panel does not check for valid data in Scheduler Configuration 2314 6513116 Qmon x qconf inconsistent in allowed characters in attribute names - 6195248 QMON Job Control Window: Incomprehensible Priority Button 2313 6410592 Double clicking in Consumables/Fixed Attributes list does not behave as a GUI should 2312 6482211 complex attributes whose deletion is denied donot reflect back after the denial message in qmon 2301 6551121 Memory leak in libdrmaa.so 916 6355875 qsub -terse to just output job id - 6522273 Wrong exit code with qconf -sds 2266 6563346 Wrong usage of 'day' format model in trunc(date) Oracle functions 2187 6562190 memory leak in sge_schedd 2265 6280747 qmon loses sharetree changes 747 6291044 "Modify"-Button is activated but should be grayed 2263 6553066 qmon's Complex Configuration Load and Save buttons did not work 2262 4742097 Qmon has a ticket number limitation 1729 4818801 qmon on secondary screen crashes when "Job Control" is pressed 2261 6538740 clear usage operation should implicitely trigger refresh in share-tree dialogue 2260 6327539 Ability to sort queue instances using each column of the queue instances table 2229 6544869 UNKNOWN group/owner in accouting(5) 2247 6556411 DBW queries "Average Job Turnaround Time", "Average Job Wait Time" might not work - 6481737 Arco should support webconsole 3.0.x - 6559385 Calling JGDI getQueueInstanceSummary results in a memory leak 1813 6328064 Queue request -q from sge_request can't be overridden through command line - 6355674 arcorun can not be used as sge_admin user if the toc file is not available 2164 6514085 Need a possibility to update existing example queries for the ARCo web application - 6426331 remove util/sge_log_tee from distribution - 6476263 function job_get_id_string() is not MT save and used in qmaster 2219 6536426 inst_sge -m fails for non-root when USER variable is not set 1860 6345522 qdel on a job in deleted state does not output any information 2258 5081743 queue status in reporting file is missing. 2050 6422335 still used usersets/project/calendar/pe/checkpoint can be removed under certain conditions Bugs fixed in SGE 6.1 since release 6.1_beta -------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 1941 5086007 qstat -qs doesn't work 2183 6499217 meaningless error in clients when reporting_param flush_time is incorrectly set - 6525497 JGDI crashes JVM when null is passed to JNI GetStringUTFChars function 2220 6440226 add installation of SGE_Helper_Service to auto installation 2221 6521802 the binary check in inst_sge is wrong! - 6537633 Extraneous space in qsub's "Invalid month specification." message 2222 6538293 Hybrid user/project share-tree is broken for user sharing amongst array jobs 2180 6518684 Qconf usage x man page inconsistency 2181 6518689 Project man page contains different attribute names. 2171 6516288 Scheduler does not write pid file in daemonize phase 2178 6518607 invalid memory access in cl_com_get_handle - 6520761 add background mode to N1 Grid Engine Helper Service - 6233523 loadcheck reports on a hyperthreaded CPU only one processor - 6276612 provide support for Itanium platform 752 6288953 scalability issue with qdel and very large array jobs 751 6291047 qconf -sstnode cannot find root - 6303750 Install guide ambiguous on role of CSP 1930 6329378 incorrect qsub error message, if an invalid integer value is passed to the -l option 1858 6344960 qtcsh behaves differently in direct mode from qrshmode 1933 6349037 "qstat -explain E" displays explanation of the same error two times. 1940 6362523 qstat -q filter does compare hosts in queue instances - 6363245 on some Windows execution hosts, execd hangs after the job has finished 1978 6383256 no newline at end of sge_shepherd's exit_status messages - 6395078 wrong entry in sgepasswd file wrongly sets whole host in error state 2012 6402127 qconf -suserl reports incorrect status if no users are defined - 6403152 qconf -as returns error code 0 even in case of unresolvable host 2015 6403810 JavaDocs for DRMAA need improvement - 6428621 add a reserved complex value to control displaying Windows GUIs - 6453426 Event clients will not get list updates, when they change their subscription after the registration - 6461308 Wrong path to spooled parallel jobs with using classic spooling 2130 6501447 No online usage for MacOS X 2141 6506701 sge_shepherd dumps core on linux amd64 for qrsh jobs with very long cmdline (> 10k) 2233 6528950 modifying a RQS with invalid syntax results in its deletion - 6533952 Admins guide does not mention that parallel environments must be linked with queues - 6535768 Upgrade chapter 5 in 6.1 install guide must mention abolition of LD_LIBRARY_PATH for Solaris/Linux - 6535775 Upgrade chapter in 6.1 Install Guide wrongly indicates upgrade from 5.3 were possible - 6537476 6.1 install guide broken and incomplete wrts MySQL installation for ARCO - 6537607 6.1 Admins guide needs improvement on the linking between queues and parallel environments - 6539215 quota verification time may not grow with the number of queues 2224 6539792 resource quotas broken after qmaster restart - 6542483 Important changes with Resource Quota chapter in 6.1 admins guide - 6545277 sge_statistic tables are not documented 2230 6546370 Pivot for ARCo Accounting Queries does not show all the fields 2231 6546802 qstat -F -xml does not show resources Bugs fixed in SGE 6.1_beta since release 6.1_preview2 ----------------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 6267190 Typo before "About the urgent priority" in Admin Guide 1445 6291021 64 bit solaris BDB rpc server broken 1703 6295319 Admin guide: refers to sge_host(5) instead of host_conf(5) - 6344917 Error in Embedded Command Line Options example - 6395075 on Windows, execd doesn't provide useful error messages when SSL keys broken 2188 6421113 CSP mode auto installation: certificates are not copied to submit hosts - 6444526 Admin guide describes N1GE backup facility, but restore is not described 2196 6472614 Auto installation option failed to save the install log 2182 6513433 remote installation of execd's need enhancement, rework, cleanup 2139 6506690 dbwriter should not use autocommit mode - 6520257 need to define continuation character behaviour with qconf file formats - 6521285 describe useful characters for every parameter 2185 6522385 qmon crash in cluster configuration dialog when modifying a host 2192 6525917 qacct -l h=<hostname> dumps core on darwin and linux itanium 2198 6528808 sge_ca script fails on nfs no root access file systems 2202 6530335 qmaster aborts when a resource quota set is modified while jobs are running 2204 6531317 qstat -xml does not show pending/zombie jobs 2206 6531921 qstat -r -xml is not working 2207 6533754 resource quota are modified on qconf -mrqs, even if the editor is exited without saving Bugs fixed in SGE 6.1_preview2 since release 6.1_preview1 --------------------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 5093930 ARCo should work with MySQL - 5101053 Regular expressions should also be mentioned in qsub in addition to complex - 5101735 Needs more boolean operators support for resource requests 56 6205203 Logical OR operator works only with complex attributes of type RESTRING 2135 6506115 Invalid qconf -mattr crashes qmaster 2150 6507572 qconf -Arqs added invalid RQS 2146 6510635 Default requests for complexes not honored by resource quotas 2161 6513944 qmaster core dump with usersets referenced in RQS 2162 6513967 unix groups are not considered by RQS 2166 6515122 add -wd working_dir in addition to -cwd option for submission
2008-09-15 18:30:57 +02:00
${MKDIR} ${DESTDIR}${SGE_ROOT}
#${CHOWN} ${SGE_USER} ${DESTDIR}${SGE_ROOT}
#${CHGRP} ${SGE_GROUP} ${DESTDIR}${SGE_ROOT}
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
cd ${WRKSRC}/source && \
Fix installed manual pages to correctly refer to SGE rather than GE. Also fix some interpreter paths. Bump PKGREVISION.
2009-08-19 11:56:22 +02:00
${ECHO} "Y" | ${SETENV} LOCALBASE=${LOCALBASE} DESTDIR=${DESTDIR} SGE_ROOT=${SGE_ROOT} ./scripts/distinst -local -all -nobdb -noopenssl -mansrc sge ${SGE_ARCH} -- doc man
Update sge to 6.0.8. Several years worth of bug fixes and features.
2006-10-19 13:51:27 +02:00
for f in archive checkpoint deadlock dump load printlog recover stat upgrade verify ; do \
Fixup DESTDIR handling in do-install. Add LICENSE (sun-iss + 2-clause-bsd + gpl + lgpl)
2012-04-18 23:05:30 +02:00
ln -s ${LOCALBASE}/bin/db4_$${f} ${DESTDIR}${SGE_ROOT}/utilbin/${SGE_ARCH}/db_$${f} ; done
ln -s ${LOCALBASE}/bin/berkeley_db4_svc ${DESTDIR}${SGE_ROOT}/utilbin/${SGE_ARCH}/berkeley_db_svc
Remove mk/find-prefix.mk usage from the parallel category. The find-prefix infrastructure was required in a pkgviews world where packages installed from pkgsrc could have different installation prefixes, and this was a way for a dependency prefix to be determined. Now that pkgviews has been removed there is no longer any need for the overhead of this infrastructure. Instead we use BUILDLINK_PREFIX.pkg for dependencies pulled in via buildlink, or LOCALBASE/PREFIX where the dependency is coming from pkgsrc. Provides a reasonable performance win due to the reduction of `pkg_info -qp` calls, some of which were redundant anyway as they were duplicating the same information provided by BUILDLINK_PREFIX.pkg.
2015-11-25 13:52:26 +01:00
ln -s ${BUILDLINK_PREFIX.openssl}/bin/openssl ${DESTDIR}${SGE_ROOT}/utilbin/${SGE_ARCH}/openssl
Bugs fixed in SGE 6.1u3 since release 6.1u2 ------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 376 4743006 problem with floating point job resource limits 1909 6353628 information provided by qstat -j and qstat -j -xml are not equivalent 2076 6440408 qstat -j messages disagree between plain, XML output 2077 6440412 qstat -j -xml messages incomplete 2138 6506667 forbid deletion of global config values 2194 6527836 authuser binary returns unusable error message! 2249 6568575 SGE does not work if primary group entry is too big in groups map 2270 6575720 ENABLE_ADDGRP_KILL is missing from sge_conf(5) 2272 6575727 sge_shadowd(8) man page is missing some env vars 2274 6564461 Duplicate scheduling info messages for reservation jobs 2276 6575731 share_tree(5) doesn't explain type field 2283 6565821 Oracle, Postgres DWB should prompt for tablespace where indexes and tables should be created 2293 6569088 Resource reservation broken for sequential jobs depending on RQS specified for subset of queues only 2303 6571749 parallel resource reservation broken when non-queue instance based quotas limits apply 2323 6576153 Creating a userset with NONE as a type results in a core dump 2327 6578213 qconf -(A,D,M,R)attr dumps core when the supplied file is empty 2328 6579232 high scheduler dispatching time with many sequential resource reservation jobs and resource quotas 2336 6287501 rctemplates lack of requirement 2338 6585721 Parallel RR broken if jobs wait for queue slots and no RQS configured 2342 6590010 Original primary group vanishes after newgrp command (USE_QSUB_GID=true) 2344 6590079 Resource reservation broken with sequences of identical jobs differing only in their -R y|n 2346 6604155 qmon binary job submit is broken 2351 6597463 qsub -t 1-N:N creates a normal job with one task 2352 6594665 Installation fails on Linux with glibc 2.6 2353 6597423 commit method of UnixLoginModule does not report RuntimeExceptions 2356 6600619 Userset spooling in classic mode is broken 2367 6597547 qdel does not recognize wc_job_range_list as it is defined 2369 6577034 Several qconf options display only single message when a list of messages should be printed 2372 6469494 clients should issue a more explicit error message when qmaster is busy 2374 6589459 Expose the availability of keyword "none" in the manual page of calendar_conf 2382 6569862 Unset old_value out of the scope 2383 6553062 qconf -mc accepts erroneous resource entries without an urgency; qmon gives (poor) error message 2387 6614041 Multiple occurrence of a name in RQS limit definition break classic spooling 2392 6614108 Specifying more than one drmaa_v_env attribute causes spurious error msg 2394 6608259 scheduler prints empty line in messages file after every 'sge_mirror' logging 2396 6608236 scheduling of parallel jobs does not respect consumables, if consumable is referenced in rqs 2400 6564543 sge_shepherd should exit if it cannot write to any of its essential files 2401 6617450 add option to reporting_params for switching off writing of consumables 2404 6618328 qmon displays wrong string for queue filtering 2406 6596931 Incorrect messages in qconf command 2407 6618619 the restore feature does not delete old configuration before restoring 2409 6619016 removing parameters from the reporting_params will not fallback to the default 2410 6619657 qmod -e|-d '*' times out in large clusters 2411 6619662 qhost becomes sluggish in large clusters 2414 6618599 Long running jobs cause incorrect usage summary for ARCo database 2415 6620930 ARCO view_accounting filters out parallel job usage incorrectly 2416 6621482 ju_exit_status should provide means to recognize the intermediate record 2417 6622842 the start_time field in intermediate accounting records is incorrect 2418 6588743 qrsh fails with "connection refused" error message 2419 6391244 qstat -ext reports wrong usage as compared to other commands such as qstat -t or qstat -j 2424 6620253 During the installation the admin user should create web.xml file 2428 6630268 upgrade from 6.0u2 and higher to 6.1u2 and higher does not work 2435 6599335 inst_sge help output for -upd switch is incorrect Bugs fixed in SGE 6.1u2 since release 6.1u1 ------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 6590960 Man pages show the wrong version number 2345 6590574 resource quota can prevent dispatching of jobs that requests no resource in this quota 2343 6589807 newline missing from "illegal debug level format" message 2338 6585721 Parallel RR broken if jobs wait for queue slots and no RQS configured 2334 6584632 user/system/operator hold state combinations cause strange qstat output Bugs fixed in SGE 6.1u1 since release 6.1 ----------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 2323 6576153 Creating a userset with NONE as a type results in a core dump 2317 6574565 Oralce, Postgres FOREIGN KEY fields need to be indexed - 6573980 'qconf -help' suggests usage of patterns in user_list which is not true 2316 6573508 qrsh with ssh causes job to go in error state when Ctrl-C is pressed 2308 6572803 qhost -xml lacks '>' with initial qhost tag 2309 6572801 sge_queue_values definition does not contain PRIMARY KEY 2321 6571714 Inadequate error message when qconf -sstree is run when no share tree is configuredIf no share tree 2241 6568712 util/arch has problem recognizing libc version number with comma 2292 6568578 6.1 upgrade procedure shall exit when there are jobs in the cluster 2249 6568575 SGE does not work if primary group entry is too big in groups map 2284 6565841 Oracle: rollback segments keep filling up, Postgres: delete query keeps running 2306 6564592 SGE 6.1 upgrade procedure is broken when using the classic qmaster spooling 2275 6564503 sge_schedd deadlock upon schedd_job_info job_list being enabled 2250 6558006 qmaster may crash with projects or usersets used in RQS 2243 6555744 qmon crashes when displaying about dialog 2248 6554313 add -u <user> to scheduler category only if there is a resource quota for the user 2238 6551568 need faster resource quota matchmaking and more concise job info messages - 6550718 qstat -j lacks resource quota info messages in case of "incomplete" resource quotas 2296 6548455 csp mode installation, using /etc/services, qmaster is not starting! 2232 6546807 qhost -j -xml does not work 2325 6542987 drmaa_run_job(3) raises error if drmaa_native_specification has leading spaces 2239 6542137 use of hostgroups in resource quotas is less performant than the full list of hosts - 6541085 NFS write error on N1GE trace file 2300 6539199 qquota(1) filtering broken for project and pe if -P/-pe switch is not used 2299 6536039 sgeremoterun not working 2201 6529974 Use of MORE fails on some architectures - 6528949 inst_sge -ux uninstallation of exechost tries to delete local spooldir, even it isn't configured! 2191 6525883 qstat -s hX filtering is broken on darwin 2189 6525375 qacct ignores jobs in output 2320 6513115 in qmon, under calendar configuration, it is possible to modify even if no calendar exists 2326 6506661 sge_conf(5), description for rlogin_daemon and qlogin_daemon is wrong 2307 6433628 qconf -sq all.q@myhost produces no value at all for complex_values (not even NONE) 2289 6565951 Qmon panel does not check for valid data in Scheduler Configuration 2314 6513116 Qmon x qconf inconsistent in allowed characters in attribute names - 6195248 QMON Job Control Window: Incomprehensible Priority Button 2313 6410592 Double clicking in Consumables/Fixed Attributes list does not behave as a GUI should 2312 6482211 complex attributes whose deletion is denied donot reflect back after the denial message in qmon 2301 6551121 Memory leak in libdrmaa.so 916 6355875 qsub -terse to just output job id - 6522273 Wrong exit code with qconf -sds 2266 6563346 Wrong usage of 'day' format model in trunc(date) Oracle functions 2187 6562190 memory leak in sge_schedd 2265 6280747 qmon loses sharetree changes 747 6291044 "Modify"-Button is activated but should be grayed 2263 6553066 qmon's Complex Configuration Load and Save buttons did not work 2262 4742097 Qmon has a ticket number limitation 1729 4818801 qmon on secondary screen crashes when "Job Control" is pressed 2261 6538740 clear usage operation should implicitely trigger refresh in share-tree dialogue 2260 6327539 Ability to sort queue instances using each column of the queue instances table 2229 6544869 UNKNOWN group/owner in accouting(5) 2247 6556411 DBW queries "Average Job Turnaround Time", "Average Job Wait Time" might not work - 6481737 Arco should support webconsole 3.0.x - 6559385 Calling JGDI getQueueInstanceSummary results in a memory leak 1813 6328064 Queue request -q from sge_request can't be overridden through command line - 6355674 arcorun can not be used as sge_admin user if the toc file is not available 2164 6514085 Need a possibility to update existing example queries for the ARCo web application - 6426331 remove util/sge_log_tee from distribution - 6476263 function job_get_id_string() is not MT save and used in qmaster 2219 6536426 inst_sge -m fails for non-root when USER variable is not set 1860 6345522 qdel on a job in deleted state does not output any information 2258 5081743 queue status in reporting file is missing. 2050 6422335 still used usersets/project/calendar/pe/checkpoint can be removed under certain conditions Bugs fixed in SGE 6.1 since release 6.1_beta -------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 1941 5086007 qstat -qs doesn't work 2183 6499217 meaningless error in clients when reporting_param flush_time is incorrectly set - 6525497 JGDI crashes JVM when null is passed to JNI GetStringUTFChars function 2220 6440226 add installation of SGE_Helper_Service to auto installation 2221 6521802 the binary check in inst_sge is wrong! - 6537633 Extraneous space in qsub's "Invalid month specification." message 2222 6538293 Hybrid user/project share-tree is broken for user sharing amongst array jobs 2180 6518684 Qconf usage x man page inconsistency 2181 6518689 Project man page contains different attribute names. 2171 6516288 Scheduler does not write pid file in daemonize phase 2178 6518607 invalid memory access in cl_com_get_handle - 6520761 add background mode to N1 Grid Engine Helper Service - 6233523 loadcheck reports on a hyperthreaded CPU only one processor - 6276612 provide support for Itanium platform 752 6288953 scalability issue with qdel and very large array jobs 751 6291047 qconf -sstnode cannot find root - 6303750 Install guide ambiguous on role of CSP 1930 6329378 incorrect qsub error message, if an invalid integer value is passed to the -l option 1858 6344960 qtcsh behaves differently in direct mode from qrshmode 1933 6349037 "qstat -explain E" displays explanation of the same error two times. 1940 6362523 qstat -q filter does compare hosts in queue instances - 6363245 on some Windows execution hosts, execd hangs after the job has finished 1978 6383256 no newline at end of sge_shepherd's exit_status messages - 6395078 wrong entry in sgepasswd file wrongly sets whole host in error state 2012 6402127 qconf -suserl reports incorrect status if no users are defined - 6403152 qconf -as returns error code 0 even in case of unresolvable host 2015 6403810 JavaDocs for DRMAA need improvement - 6428621 add a reserved complex value to control displaying Windows GUIs - 6453426 Event clients will not get list updates, when they change their subscription after the registration - 6461308 Wrong path to spooled parallel jobs with using classic spooling 2130 6501447 No online usage for MacOS X 2141 6506701 sge_shepherd dumps core on linux amd64 for qrsh jobs with very long cmdline (> 10k) 2233 6528950 modifying a RQS with invalid syntax results in its deletion - 6533952 Admins guide does not mention that parallel environments must be linked with queues - 6535768 Upgrade chapter 5 in 6.1 install guide must mention abolition of LD_LIBRARY_PATH for Solaris/Linux - 6535775 Upgrade chapter in 6.1 Install Guide wrongly indicates upgrade from 5.3 were possible - 6537476 6.1 install guide broken and incomplete wrts MySQL installation for ARCO - 6537607 6.1 Admins guide needs improvement on the linking between queues and parallel environments - 6539215 quota verification time may not grow with the number of queues 2224 6539792 resource quotas broken after qmaster restart - 6542483 Important changes with Resource Quota chapter in 6.1 admins guide - 6545277 sge_statistic tables are not documented 2230 6546370 Pivot for ARCo Accounting Queries does not show all the fields 2231 6546802 qstat -F -xml does not show resources Bugs fixed in SGE 6.1_beta since release 6.1_preview2 ----------------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 6267190 Typo before "About the urgent priority" in Admin Guide 1445 6291021 64 bit solaris BDB rpc server broken 1703 6295319 Admin guide: refers to sge_host(5) instead of host_conf(5) - 6344917 Error in Embedded Command Line Options example - 6395075 on Windows, execd doesn't provide useful error messages when SSL keys broken 2188 6421113 CSP mode auto installation: certificates are not copied to submit hosts - 6444526 Admin guide describes N1GE backup facility, but restore is not described 2196 6472614 Auto installation option failed to save the install log 2182 6513433 remote installation of execd's need enhancement, rework, cleanup 2139 6506690 dbwriter should not use autocommit mode - 6520257 need to define continuation character behaviour with qconf file formats - 6521285 describe useful characters for every parameter 2185 6522385 qmon crash in cluster configuration dialog when modifying a host 2192 6525917 qacct -l h=<hostname> dumps core on darwin and linux itanium 2198 6528808 sge_ca script fails on nfs no root access file systems 2202 6530335 qmaster aborts when a resource quota set is modified while jobs are running 2204 6531317 qstat -xml does not show pending/zombie jobs 2206 6531921 qstat -r -xml is not working 2207 6533754 resource quota are modified on qconf -mrqs, even if the editor is exited without saving Bugs fixed in SGE 6.1_preview2 since release 6.1_preview1 --------------------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 5093930 ARCo should work with MySQL - 5101053 Regular expressions should also be mentioned in qsub in addition to complex - 5101735 Needs more boolean operators support for resource requests 56 6205203 Logical OR operator works only with complex attributes of type RESTRING 2135 6506115 Invalid qconf -mattr crashes qmaster 2150 6507572 qconf -Arqs added invalid RQS 2146 6510635 Default requests for complexes not honored by resource quotas 2161 6513944 qmaster core dump with usersets referenced in RQS 2162 6513967 unix groups are not considered by RQS 2166 6515122 add -wd working_dir in addition to -cwd option for submission
2008-09-15 18:30:57 +02:00
cd ${DESTDIR}${SGE_ROOT} && ${SETENV} SGE_ROOT=${SGE_ROOT} DESTDIR=${DESTDIR} ./util/setfileperm.sh -auto \
Update sge to 6.0.8. Several years worth of bug fixes and features.
2006-10-19 13:51:27 +02:00
${SGE_ROOT}
Bugs fixed in SGE 6.1u3 since release 6.1u2 ------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 376 4743006 problem with floating point job resource limits 1909 6353628 information provided by qstat -j and qstat -j -xml are not equivalent 2076 6440408 qstat -j messages disagree between plain, XML output 2077 6440412 qstat -j -xml messages incomplete 2138 6506667 forbid deletion of global config values 2194 6527836 authuser binary returns unusable error message! 2249 6568575 SGE does not work if primary group entry is too big in groups map 2270 6575720 ENABLE_ADDGRP_KILL is missing from sge_conf(5) 2272 6575727 sge_shadowd(8) man page is missing some env vars 2274 6564461 Duplicate scheduling info messages for reservation jobs 2276 6575731 share_tree(5) doesn't explain type field 2283 6565821 Oracle, Postgres DWB should prompt for tablespace where indexes and tables should be created 2293 6569088 Resource reservation broken for sequential jobs depending on RQS specified for subset of queues only 2303 6571749 parallel resource reservation broken when non-queue instance based quotas limits apply 2323 6576153 Creating a userset with NONE as a type results in a core dump 2327 6578213 qconf -(A,D,M,R)attr dumps core when the supplied file is empty 2328 6579232 high scheduler dispatching time with many sequential resource reservation jobs and resource quotas 2336 6287501 rctemplates lack of requirement 2338 6585721 Parallel RR broken if jobs wait for queue slots and no RQS configured 2342 6590010 Original primary group vanishes after newgrp command (USE_QSUB_GID=true) 2344 6590079 Resource reservation broken with sequences of identical jobs differing only in their -R y|n 2346 6604155 qmon binary job submit is broken 2351 6597463 qsub -t 1-N:N creates a normal job with one task 2352 6594665 Installation fails on Linux with glibc 2.6 2353 6597423 commit method of UnixLoginModule does not report RuntimeExceptions 2356 6600619 Userset spooling in classic mode is broken 2367 6597547 qdel does not recognize wc_job_range_list as it is defined 2369 6577034 Several qconf options display only single message when a list of messages should be printed 2372 6469494 clients should issue a more explicit error message when qmaster is busy 2374 6589459 Expose the availability of keyword "none" in the manual page of calendar_conf 2382 6569862 Unset old_value out of the scope 2383 6553062 qconf -mc accepts erroneous resource entries without an urgency; qmon gives (poor) error message 2387 6614041 Multiple occurrence of a name in RQS limit definition break classic spooling 2392 6614108 Specifying more than one drmaa_v_env attribute causes spurious error msg 2394 6608259 scheduler prints empty line in messages file after every 'sge_mirror' logging 2396 6608236 scheduling of parallel jobs does not respect consumables, if consumable is referenced in rqs 2400 6564543 sge_shepherd should exit if it cannot write to any of its essential files 2401 6617450 add option to reporting_params for switching off writing of consumables 2404 6618328 qmon displays wrong string for queue filtering 2406 6596931 Incorrect messages in qconf command 2407 6618619 the restore feature does not delete old configuration before restoring 2409 6619016 removing parameters from the reporting_params will not fallback to the default 2410 6619657 qmod -e|-d '*' times out in large clusters 2411 6619662 qhost becomes sluggish in large clusters 2414 6618599 Long running jobs cause incorrect usage summary for ARCo database 2415 6620930 ARCO view_accounting filters out parallel job usage incorrectly 2416 6621482 ju_exit_status should provide means to recognize the intermediate record 2417 6622842 the start_time field in intermediate accounting records is incorrect 2418 6588743 qrsh fails with "connection refused" error message 2419 6391244 qstat -ext reports wrong usage as compared to other commands such as qstat -t or qstat -j 2424 6620253 During the installation the admin user should create web.xml file 2428 6630268 upgrade from 6.0u2 and higher to 6.1u2 and higher does not work 2435 6599335 inst_sge help output for -upd switch is incorrect Bugs fixed in SGE 6.1u2 since release 6.1u1 ------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 6590960 Man pages show the wrong version number 2345 6590574 resource quota can prevent dispatching of jobs that requests no resource in this quota 2343 6589807 newline missing from "illegal debug level format" message 2338 6585721 Parallel RR broken if jobs wait for queue slots and no RQS configured 2334 6584632 user/system/operator hold state combinations cause strange qstat output Bugs fixed in SGE 6.1u1 since release 6.1 ----------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 2323 6576153 Creating a userset with NONE as a type results in a core dump 2317 6574565 Oralce, Postgres FOREIGN KEY fields need to be indexed - 6573980 'qconf -help' suggests usage of patterns in user_list which is not true 2316 6573508 qrsh with ssh causes job to go in error state when Ctrl-C is pressed 2308 6572803 qhost -xml lacks '>' with initial qhost tag 2309 6572801 sge_queue_values definition does not contain PRIMARY KEY 2321 6571714 Inadequate error message when qconf -sstree is run when no share tree is configuredIf no share tree 2241 6568712 util/arch has problem recognizing libc version number with comma 2292 6568578 6.1 upgrade procedure shall exit when there are jobs in the cluster 2249 6568575 SGE does not work if primary group entry is too big in groups map 2284 6565841 Oracle: rollback segments keep filling up, Postgres: delete query keeps running 2306 6564592 SGE 6.1 upgrade procedure is broken when using the classic qmaster spooling 2275 6564503 sge_schedd deadlock upon schedd_job_info job_list being enabled 2250 6558006 qmaster may crash with projects or usersets used in RQS 2243 6555744 qmon crashes when displaying about dialog 2248 6554313 add -u <user> to scheduler category only if there is a resource quota for the user 2238 6551568 need faster resource quota matchmaking and more concise job info messages - 6550718 qstat -j lacks resource quota info messages in case of "incomplete" resource quotas 2296 6548455 csp mode installation, using /etc/services, qmaster is not starting! 2232 6546807 qhost -j -xml does not work 2325 6542987 drmaa_run_job(3) raises error if drmaa_native_specification has leading spaces 2239 6542137 use of hostgroups in resource quotas is less performant than the full list of hosts - 6541085 NFS write error on N1GE trace file 2300 6539199 qquota(1) filtering broken for project and pe if -P/-pe switch is not used 2299 6536039 sgeremoterun not working 2201 6529974 Use of MORE fails on some architectures - 6528949 inst_sge -ux uninstallation of exechost tries to delete local spooldir, even it isn't configured! 2191 6525883 qstat -s hX filtering is broken on darwin 2189 6525375 qacct ignores jobs in output 2320 6513115 in qmon, under calendar configuration, it is possible to modify even if no calendar exists 2326 6506661 sge_conf(5), description for rlogin_daemon and qlogin_daemon is wrong 2307 6433628 qconf -sq all.q@myhost produces no value at all for complex_values (not even NONE) 2289 6565951 Qmon panel does not check for valid data in Scheduler Configuration 2314 6513116 Qmon x qconf inconsistent in allowed characters in attribute names - 6195248 QMON Job Control Window: Incomprehensible Priority Button 2313 6410592 Double clicking in Consumables/Fixed Attributes list does not behave as a GUI should 2312 6482211 complex attributes whose deletion is denied donot reflect back after the denial message in qmon 2301 6551121 Memory leak in libdrmaa.so 916 6355875 qsub -terse to just output job id - 6522273 Wrong exit code with qconf -sds 2266 6563346 Wrong usage of 'day' format model in trunc(date) Oracle functions 2187 6562190 memory leak in sge_schedd 2265 6280747 qmon loses sharetree changes 747 6291044 "Modify"-Button is activated but should be grayed 2263 6553066 qmon's Complex Configuration Load and Save buttons did not work 2262 4742097 Qmon has a ticket number limitation 1729 4818801 qmon on secondary screen crashes when "Job Control" is pressed 2261 6538740 clear usage operation should implicitely trigger refresh in share-tree dialogue 2260 6327539 Ability to sort queue instances using each column of the queue instances table 2229 6544869 UNKNOWN group/owner in accouting(5) 2247 6556411 DBW queries "Average Job Turnaround Time", "Average Job Wait Time" might not work - 6481737 Arco should support webconsole 3.0.x - 6559385 Calling JGDI getQueueInstanceSummary results in a memory leak 1813 6328064 Queue request -q from sge_request can't be overridden through command line - 6355674 arcorun can not be used as sge_admin user if the toc file is not available 2164 6514085 Need a possibility to update existing example queries for the ARCo web application - 6426331 remove util/sge_log_tee from distribution - 6476263 function job_get_id_string() is not MT save and used in qmaster 2219 6536426 inst_sge -m fails for non-root when USER variable is not set 1860 6345522 qdel on a job in deleted state does not output any information 2258 5081743 queue status in reporting file is missing. 2050 6422335 still used usersets/project/calendar/pe/checkpoint can be removed under certain conditions Bugs fixed in SGE 6.1 since release 6.1_beta -------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 1941 5086007 qstat -qs doesn't work 2183 6499217 meaningless error in clients when reporting_param flush_time is incorrectly set - 6525497 JGDI crashes JVM when null is passed to JNI GetStringUTFChars function 2220 6440226 add installation of SGE_Helper_Service to auto installation 2221 6521802 the binary check in inst_sge is wrong! - 6537633 Extraneous space in qsub's "Invalid month specification." message 2222 6538293 Hybrid user/project share-tree is broken for user sharing amongst array jobs 2180 6518684 Qconf usage x man page inconsistency 2181 6518689 Project man page contains different attribute names. 2171 6516288 Scheduler does not write pid file in daemonize phase 2178 6518607 invalid memory access in cl_com_get_handle - 6520761 add background mode to N1 Grid Engine Helper Service - 6233523 loadcheck reports on a hyperthreaded CPU only one processor - 6276612 provide support for Itanium platform 752 6288953 scalability issue with qdel and very large array jobs 751 6291047 qconf -sstnode cannot find root - 6303750 Install guide ambiguous on role of CSP 1930 6329378 incorrect qsub error message, if an invalid integer value is passed to the -l option 1858 6344960 qtcsh behaves differently in direct mode from qrshmode 1933 6349037 "qstat -explain E" displays explanation of the same error two times. 1940 6362523 qstat -q filter does compare hosts in queue instances - 6363245 on some Windows execution hosts, execd hangs after the job has finished 1978 6383256 no newline at end of sge_shepherd's exit_status messages - 6395078 wrong entry in sgepasswd file wrongly sets whole host in error state 2012 6402127 qconf -suserl reports incorrect status if no users are defined - 6403152 qconf -as returns error code 0 even in case of unresolvable host 2015 6403810 JavaDocs for DRMAA need improvement - 6428621 add a reserved complex value to control displaying Windows GUIs - 6453426 Event clients will not get list updates, when they change their subscription after the registration - 6461308 Wrong path to spooled parallel jobs with using classic spooling 2130 6501447 No online usage for MacOS X 2141 6506701 sge_shepherd dumps core on linux amd64 for qrsh jobs with very long cmdline (> 10k) 2233 6528950 modifying a RQS with invalid syntax results in its deletion - 6533952 Admins guide does not mention that parallel environments must be linked with queues - 6535768 Upgrade chapter 5 in 6.1 install guide must mention abolition of LD_LIBRARY_PATH for Solaris/Linux - 6535775 Upgrade chapter in 6.1 Install Guide wrongly indicates upgrade from 5.3 were possible - 6537476 6.1 install guide broken and incomplete wrts MySQL installation for ARCO - 6537607 6.1 Admins guide needs improvement on the linking between queues and parallel environments - 6539215 quota verification time may not grow with the number of queues 2224 6539792 resource quotas broken after qmaster restart - 6542483 Important changes with Resource Quota chapter in 6.1 admins guide - 6545277 sge_statistic tables are not documented 2230 6546370 Pivot for ARCo Accounting Queries does not show all the fields 2231 6546802 qstat -F -xml does not show resources Bugs fixed in SGE 6.1_beta since release 6.1_preview2 ----------------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 6267190 Typo before "About the urgent priority" in Admin Guide 1445 6291021 64 bit solaris BDB rpc server broken 1703 6295319 Admin guide: refers to sge_host(5) instead of host_conf(5) - 6344917 Error in Embedded Command Line Options example - 6395075 on Windows, execd doesn't provide useful error messages when SSL keys broken 2188 6421113 CSP mode auto installation: certificates are not copied to submit hosts - 6444526 Admin guide describes N1GE backup facility, but restore is not described 2196 6472614 Auto installation option failed to save the install log 2182 6513433 remote installation of execd's need enhancement, rework, cleanup 2139 6506690 dbwriter should not use autocommit mode - 6520257 need to define continuation character behaviour with qconf file formats - 6521285 describe useful characters for every parameter 2185 6522385 qmon crash in cluster configuration dialog when modifying a host 2192 6525917 qacct -l h=<hostname> dumps core on darwin and linux itanium 2198 6528808 sge_ca script fails on nfs no root access file systems 2202 6530335 qmaster aborts when a resource quota set is modified while jobs are running 2204 6531317 qstat -xml does not show pending/zombie jobs 2206 6531921 qstat -r -xml is not working 2207 6533754 resource quota are modified on qconf -mrqs, even if the editor is exited without saving Bugs fixed in SGE 6.1_preview2 since release 6.1_preview1 --------------------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 5093930 ARCo should work with MySQL - 5101053 Regular expressions should also be mentioned in qsub in addition to complex - 5101735 Needs more boolean operators support for resource requests 56 6205203 Logical OR operator works only with complex attributes of type RESTRING 2135 6506115 Invalid qconf -mattr crashes qmaster 2150 6507572 qconf -Arqs added invalid RQS 2146 6510635 Default requests for complexes not honored by resource quotas 2161 6513944 qmaster core dump with usersets referenced in RQS 2162 6513967 unix groups are not considered by RQS 2166 6515122 add -wd working_dir in addition to -cwd option for submission
2008-09-15 18:30:57 +02:00
for f in ${DESTDIR}${SGE_ROOT}/bin/${SGE_ARCH}/q* ; do \
cd ${DESTDIR}${PREFIX}/bin && ln -fs $$f ; done
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
Update sge to 6.0.8. Several years worth of bug fixes and features.
2006-10-19 13:51:27 +02:00
#% scripts/distinst -local"
Bugs fixed in SGE 6.1u3 since release 6.1u2 ------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 376 4743006 problem with floating point job resource limits 1909 6353628 information provided by qstat -j and qstat -j -xml are not equivalent 2076 6440408 qstat -j messages disagree between plain, XML output 2077 6440412 qstat -j -xml messages incomplete 2138 6506667 forbid deletion of global config values 2194 6527836 authuser binary returns unusable error message! 2249 6568575 SGE does not work if primary group entry is too big in groups map 2270 6575720 ENABLE_ADDGRP_KILL is missing from sge_conf(5) 2272 6575727 sge_shadowd(8) man page is missing some env vars 2274 6564461 Duplicate scheduling info messages for reservation jobs 2276 6575731 share_tree(5) doesn't explain type field 2283 6565821 Oracle, Postgres DWB should prompt for tablespace where indexes and tables should be created 2293 6569088 Resource reservation broken for sequential jobs depending on RQS specified for subset of queues only 2303 6571749 parallel resource reservation broken when non-queue instance based quotas limits apply 2323 6576153 Creating a userset with NONE as a type results in a core dump 2327 6578213 qconf -(A,D,M,R)attr dumps core when the supplied file is empty 2328 6579232 high scheduler dispatching time with many sequential resource reservation jobs and resource quotas 2336 6287501 rctemplates lack of requirement 2338 6585721 Parallel RR broken if jobs wait for queue slots and no RQS configured 2342 6590010 Original primary group vanishes after newgrp command (USE_QSUB_GID=true) 2344 6590079 Resource reservation broken with sequences of identical jobs differing only in their -R y|n 2346 6604155 qmon binary job submit is broken 2351 6597463 qsub -t 1-N:N creates a normal job with one task 2352 6594665 Installation fails on Linux with glibc 2.6 2353 6597423 commit method of UnixLoginModule does not report RuntimeExceptions 2356 6600619 Userset spooling in classic mode is broken 2367 6597547 qdel does not recognize wc_job_range_list as it is defined 2369 6577034 Several qconf options display only single message when a list of messages should be printed 2372 6469494 clients should issue a more explicit error message when qmaster is busy 2374 6589459 Expose the availability of keyword "none" in the manual page of calendar_conf 2382 6569862 Unset old_value out of the scope 2383 6553062 qconf -mc accepts erroneous resource entries without an urgency; qmon gives (poor) error message 2387 6614041 Multiple occurrence of a name in RQS limit definition break classic spooling 2392 6614108 Specifying more than one drmaa_v_env attribute causes spurious error msg 2394 6608259 scheduler prints empty line in messages file after every 'sge_mirror' logging 2396 6608236 scheduling of parallel jobs does not respect consumables, if consumable is referenced in rqs 2400 6564543 sge_shepherd should exit if it cannot write to any of its essential files 2401 6617450 add option to reporting_params for switching off writing of consumables 2404 6618328 qmon displays wrong string for queue filtering 2406 6596931 Incorrect messages in qconf command 2407 6618619 the restore feature does not delete old configuration before restoring 2409 6619016 removing parameters from the reporting_params will not fallback to the default 2410 6619657 qmod -e|-d '*' times out in large clusters 2411 6619662 qhost becomes sluggish in large clusters 2414 6618599 Long running jobs cause incorrect usage summary for ARCo database 2415 6620930 ARCO view_accounting filters out parallel job usage incorrectly 2416 6621482 ju_exit_status should provide means to recognize the intermediate record 2417 6622842 the start_time field in intermediate accounting records is incorrect 2418 6588743 qrsh fails with "connection refused" error message 2419 6391244 qstat -ext reports wrong usage as compared to other commands such as qstat -t or qstat -j 2424 6620253 During the installation the admin user should create web.xml file 2428 6630268 upgrade from 6.0u2 and higher to 6.1u2 and higher does not work 2435 6599335 inst_sge help output for -upd switch is incorrect Bugs fixed in SGE 6.1u2 since release 6.1u1 ------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 6590960 Man pages show the wrong version number 2345 6590574 resource quota can prevent dispatching of jobs that requests no resource in this quota 2343 6589807 newline missing from "illegal debug level format" message 2338 6585721 Parallel RR broken if jobs wait for queue slots and no RQS configured 2334 6584632 user/system/operator hold state combinations cause strange qstat output Bugs fixed in SGE 6.1u1 since release 6.1 ----------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 2323 6576153 Creating a userset with NONE as a type results in a core dump 2317 6574565 Oralce, Postgres FOREIGN KEY fields need to be indexed - 6573980 'qconf -help' suggests usage of patterns in user_list which is not true 2316 6573508 qrsh with ssh causes job to go in error state when Ctrl-C is pressed 2308 6572803 qhost -xml lacks '>' with initial qhost tag 2309 6572801 sge_queue_values definition does not contain PRIMARY KEY 2321 6571714 Inadequate error message when qconf -sstree is run when no share tree is configuredIf no share tree 2241 6568712 util/arch has problem recognizing libc version number with comma 2292 6568578 6.1 upgrade procedure shall exit when there are jobs in the cluster 2249 6568575 SGE does not work if primary group entry is too big in groups map 2284 6565841 Oracle: rollback segments keep filling up, Postgres: delete query keeps running 2306 6564592 SGE 6.1 upgrade procedure is broken when using the classic qmaster spooling 2275 6564503 sge_schedd deadlock upon schedd_job_info job_list being enabled 2250 6558006 qmaster may crash with projects or usersets used in RQS 2243 6555744 qmon crashes when displaying about dialog 2248 6554313 add -u <user> to scheduler category only if there is a resource quota for the user 2238 6551568 need faster resource quota matchmaking and more concise job info messages - 6550718 qstat -j lacks resource quota info messages in case of "incomplete" resource quotas 2296 6548455 csp mode installation, using /etc/services, qmaster is not starting! 2232 6546807 qhost -j -xml does not work 2325 6542987 drmaa_run_job(3) raises error if drmaa_native_specification has leading spaces 2239 6542137 use of hostgroups in resource quotas is less performant than the full list of hosts - 6541085 NFS write error on N1GE trace file 2300 6539199 qquota(1) filtering broken for project and pe if -P/-pe switch is not used 2299 6536039 sgeremoterun not working 2201 6529974 Use of MORE fails on some architectures - 6528949 inst_sge -ux uninstallation of exechost tries to delete local spooldir, even it isn't configured! 2191 6525883 qstat -s hX filtering is broken on darwin 2189 6525375 qacct ignores jobs in output 2320 6513115 in qmon, under calendar configuration, it is possible to modify even if no calendar exists 2326 6506661 sge_conf(5), description for rlogin_daemon and qlogin_daemon is wrong 2307 6433628 qconf -sq all.q@myhost produces no value at all for complex_values (not even NONE) 2289 6565951 Qmon panel does not check for valid data in Scheduler Configuration 2314 6513116 Qmon x qconf inconsistent in allowed characters in attribute names - 6195248 QMON Job Control Window: Incomprehensible Priority Button 2313 6410592 Double clicking in Consumables/Fixed Attributes list does not behave as a GUI should 2312 6482211 complex attributes whose deletion is denied donot reflect back after the denial message in qmon 2301 6551121 Memory leak in libdrmaa.so 916 6355875 qsub -terse to just output job id - 6522273 Wrong exit code with qconf -sds 2266 6563346 Wrong usage of 'day' format model in trunc(date) Oracle functions 2187 6562190 memory leak in sge_schedd 2265 6280747 qmon loses sharetree changes 747 6291044 "Modify"-Button is activated but should be grayed 2263 6553066 qmon's Complex Configuration Load and Save buttons did not work 2262 4742097 Qmon has a ticket number limitation 1729 4818801 qmon on secondary screen crashes when "Job Control" is pressed 2261 6538740 clear usage operation should implicitely trigger refresh in share-tree dialogue 2260 6327539 Ability to sort queue instances using each column of the queue instances table 2229 6544869 UNKNOWN group/owner in accouting(5) 2247 6556411 DBW queries "Average Job Turnaround Time", "Average Job Wait Time" might not work - 6481737 Arco should support webconsole 3.0.x - 6559385 Calling JGDI getQueueInstanceSummary results in a memory leak 1813 6328064 Queue request -q from sge_request can't be overridden through command line - 6355674 arcorun can not be used as sge_admin user if the toc file is not available 2164 6514085 Need a possibility to update existing example queries for the ARCo web application - 6426331 remove util/sge_log_tee from distribution - 6476263 function job_get_id_string() is not MT save and used in qmaster 2219 6536426 inst_sge -m fails for non-root when USER variable is not set 1860 6345522 qdel on a job in deleted state does not output any information 2258 5081743 queue status in reporting file is missing. 2050 6422335 still used usersets/project/calendar/pe/checkpoint can be removed under certain conditions Bugs fixed in SGE 6.1 since release 6.1_beta -------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ 1941 5086007 qstat -qs doesn't work 2183 6499217 meaningless error in clients when reporting_param flush_time is incorrectly set - 6525497 JGDI crashes JVM when null is passed to JNI GetStringUTFChars function 2220 6440226 add installation of SGE_Helper_Service to auto installation 2221 6521802 the binary check in inst_sge is wrong! - 6537633 Extraneous space in qsub's "Invalid month specification." message 2222 6538293 Hybrid user/project share-tree is broken for user sharing amongst array jobs 2180 6518684 Qconf usage x man page inconsistency 2181 6518689 Project man page contains different attribute names. 2171 6516288 Scheduler does not write pid file in daemonize phase 2178 6518607 invalid memory access in cl_com_get_handle - 6520761 add background mode to N1 Grid Engine Helper Service - 6233523 loadcheck reports on a hyperthreaded CPU only one processor - 6276612 provide support for Itanium platform 752 6288953 scalability issue with qdel and very large array jobs 751 6291047 qconf -sstnode cannot find root - 6303750 Install guide ambiguous on role of CSP 1930 6329378 incorrect qsub error message, if an invalid integer value is passed to the -l option 1858 6344960 qtcsh behaves differently in direct mode from qrshmode 1933 6349037 "qstat -explain E" displays explanation of the same error two times. 1940 6362523 qstat -q filter does compare hosts in queue instances - 6363245 on some Windows execution hosts, execd hangs after the job has finished 1978 6383256 no newline at end of sge_shepherd's exit_status messages - 6395078 wrong entry in sgepasswd file wrongly sets whole host in error state 2012 6402127 qconf -suserl reports incorrect status if no users are defined - 6403152 qconf -as returns error code 0 even in case of unresolvable host 2015 6403810 JavaDocs for DRMAA need improvement - 6428621 add a reserved complex value to control displaying Windows GUIs - 6453426 Event clients will not get list updates, when they change their subscription after the registration - 6461308 Wrong path to spooled parallel jobs with using classic spooling 2130 6501447 No online usage for MacOS X 2141 6506701 sge_shepherd dumps core on linux amd64 for qrsh jobs with very long cmdline (> 10k) 2233 6528950 modifying a RQS with invalid syntax results in its deletion - 6533952 Admins guide does not mention that parallel environments must be linked with queues - 6535768 Upgrade chapter 5 in 6.1 install guide must mention abolition of LD_LIBRARY_PATH for Solaris/Linux - 6535775 Upgrade chapter in 6.1 Install Guide wrongly indicates upgrade from 5.3 were possible - 6537476 6.1 install guide broken and incomplete wrts MySQL installation for ARCO - 6537607 6.1 Admins guide needs improvement on the linking between queues and parallel environments - 6539215 quota verification time may not grow with the number of queues 2224 6539792 resource quotas broken after qmaster restart - 6542483 Important changes with Resource Quota chapter in 6.1 admins guide - 6545277 sge_statistic tables are not documented 2230 6546370 Pivot for ARCo Accounting Queries does not show all the fields 2231 6546802 qstat -F -xml does not show resources Bugs fixed in SGE 6.1_beta since release 6.1_preview2 ----------------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 6267190 Typo before "About the urgent priority" in Admin Guide 1445 6291021 64 bit solaris BDB rpc server broken 1703 6295319 Admin guide: refers to sge_host(5) instead of host_conf(5) - 6344917 Error in Embedded Command Line Options example - 6395075 on Windows, execd doesn't provide useful error messages when SSL keys broken 2188 6421113 CSP mode auto installation: certificates are not copied to submit hosts - 6444526 Admin guide describes N1GE backup facility, but restore is not described 2196 6472614 Auto installation option failed to save the install log 2182 6513433 remote installation of execd's need enhancement, rework, cleanup 2139 6506690 dbwriter should not use autocommit mode - 6520257 need to define continuation character behaviour with qconf file formats - 6521285 describe useful characters for every parameter 2185 6522385 qmon crash in cluster configuration dialog when modifying a host 2192 6525917 qacct -l h=<hostname> dumps core on darwin and linux itanium 2198 6528808 sge_ca script fails on nfs no root access file systems 2202 6530335 qmaster aborts when a resource quota set is modified while jobs are running 2204 6531317 qstat -xml does not show pending/zombie jobs 2206 6531921 qstat -r -xml is not working 2207 6533754 resource quota are modified on qconf -mrqs, even if the editor is exited without saving Bugs fixed in SGE 6.1_preview2 since release 6.1_preview1 --------------------------------------------------------- Issue Sun BugId Description -------- --------- ------------------------------------------------------------------------------------------ - 5093930 ARCo should work with MySQL - 5101053 Regular expressions should also be mentioned in qsub in addition to complex - 5101735 Needs more boolean operators support for resource requests 56 6205203 Logical OR operator works only with complex attributes of type RESTRING 2135 6506115 Invalid qconf -mattr crashes qmaster 2150 6507572 qconf -Arqs added invalid RQS 2146 6510635 Default requests for complexes not honored by resource quotas 2161 6513944 qmaster core dump with usersets referenced in RQS 2162 6513967 unix groups are not considered by RQS 2166 6515122 add -wd working_dir in addition to -cwd option for submission
2008-09-15 18:30:57 +02:00
PLIST_SUBST+= SGE_ARCH=${SGE_ARCH}
.include "../../databases/db4/buildlink3.mk" # 4.2 at least
Update to the Son of Grid Engine 8.0.0d The Son of Grid Engine is a community project to continue Sun Grid Engine. Notable changes in Son of Grid Engine ------------------------------------- Version 8.0.0d -------------- * Bug fixes * Man and fixes * Fix building with older gcc versions * Provide load average in qstat XML output [#446, #454] * Partially back out Univa change which broke classic spooling * Fix -terse in sge_request [#777] * Other changes (possibly-incompatible) * Message fixes Version 8.0.0c -------------- * Bug fixes * Man and other documentation fixes * Build/installation fixes (particularly for Red Hat 6 and Linux 3) * Fix group ids for submitted jobs [U] * Fix default value of boolean with JSV [U] * Windows fixes for helper crashes and Vista GUI jobs [U] * Ensure parallel jobs are dispatched to the least loaded host [U] * Correct ownership of qsub -pty output file; was owned by admin user [U] * Fix format of Windows loadcheck.exe output [U] * Read from stderr even if stdout is already closed in IJS [U] * Fix PDC_INTERVAL=NEVER execd parameter [U] * Fix accounting information for Windows GUI jobs [U] * Increase default MAX_DYN_EC qmaster param [U] * Fix qsub -sync y error message and enforce MAX_DYN_EC correctly [U] * Fix job validation (-w e) behaviour [#716] [U] * Fix qrsh input redirection [U] * Avoid warning when submitting a qrsh job [U] * Print start time in qstat -j -xml output [U] * Don't raise an error changing resource request on waiting job [#806] * Don't exit 0 on error with qconf -secl or -sep * Include string.h in drmaa.h [#712] * Fix process-scheduler-log with host aliases * Enhancements * Base qmake and qtcsh on the current gmake and tcsh source [#289, #504, #832] * Support "-binding linear" and "-binding linear:slots" * Use the hwloc library for all topology information and core binding, supporting more operating systems (now: AIX, Darwin, FreeBSD, GNU/Linux, HPUX, MS Windows, OSF/1, Solaris), and more hardware types (specifically AMD Magny Cours and similar) * Add task number to execd "exceeds job ... limit" * Other changes (possibly-incompatible) * Modify default paths in build files and elsewhere [U] * Assorted message fixes * In RPMs, move qsched to qmaster package, and separate drmaa4ruby * Default to newijs in load_sge_config.sh * Default to sh, not csh for configured shell Version 8.0.0b -------------- * Bug fixes * Build/installation fixes [including #424, #1349] [(U)] * Fix execd init script [#1348] * Man and other documentation fixes [including #614, #764] [(U)] * Fix contents of admin mail properly [#1307, #1345] * Fix qalter messages for -tc * Fix build with -DSGE_PQS_API * Fix group ids for submitted jobs [U] * Enhancements * Update qsched and add man page * Other changes (possibly-incompatible) * Avoid the use of /bin/ksh [#1306] * Change installation defaults to classic spooling, not adding shadow hosts, and not JMX. [(U)] Version 8.0.0a -------------- This is roughly a superset of Univa's 8.0.0 (the V800_TAG from https://github.com/gridengine/gridengine), with thanks for that. Changes made there which haven't been included in this version: PLPA source not removed; some different build/installation defaults (e.g. for JMX); Univa/UGE "branding" (partly because trademark status is unknown); authuser not removed (for SDM and testing use), * Bug fixes * Many man and other documentation fixes [including #790, #776, #769, #733, #610, #587, #581, #459, #456, #439, #255, #1288, #797, #1271, #773] [(U)] * Some program message fixes [(U)] * Various build and installation fixes [including #761, #709, #656, #616, #546, #536, #521, #491, #438, #414, #411, #383, #381, #138, #455, #344, #438, #1311, #1272, #1273] [(U)] * Ask for keystore password twice on installation * Fix qmaster crashes with tightly integrated parallel jobs or un-discoverable qinstance [#789] [U] * Report 0 cores and sockets on unsupported Solaris hosts [U] * Fix malloc hooks which caused crashes, particularly with SuSE 11 [#792, #748, #749] [U] * Verify the pe task start user in execd in non-CSP mode [U] * Fix binding parameters parsing [U] * Fix JSV logging with multiple users submitting jobs on same submit host [U] * Fix unresponsive qmaster when modifying the global configuration in a huge cluster [U] * Speed up finishing tightly integrated jobs [U] * Check consistency of JSV binding information properly [U] * Fix broken project spooling, which caused loss of project when restarting master when using core binding [U] * Fix slotwise preemption failure to unsuspend one job per host [#775] [U] * Fix problems retrieving passwd and group information with large responses [#1295] [(U)] * Fix JSV changing default of boolean [U] * Fix ENABLE_RESCHEDULE_SLAVE=1 [U] * Allow comma in CMDNAME with Perl JSV scripts [#803] * Don't put queue into error state when supplementary group id cannot be set [#185] [U] * Don't convert LF to CRLF with qrsh -pty [U] * Fix qconf segfault on bad subordination string [U] * Fix group ids of submitted jobs [U] * Disallow -masterq with serial jobs [#155] [U] * Fix 100% CPU use by shepherd of qsh [U] * Removed unnecessary binding warning on job starts [U] * Fix qconf error reports when tmp directory has 755 permissions [U] * Fix suspending of remote process on qrsh -pty yes <cmd> on Solaris [U] * Fix starting jobs after global host changed [U] * Reject invalid load_formula value [U] * Fix handling of implicitly-requested exclusive resources [U] * Fix execd vmem reporting on 64-bit Linux [U] * Fix startup of execd on Windows Vista [U] * Set xterm's path more appropriately on GNU/Linux [#557] * Fix generation of admin email from failed jobs [#1307] * Fix some ill-formed output from qstat -xml [#314] * Fix handling of multi-line environment variables propagated to shepherd [#395] * Fix example MPI PE templates * Fix bad quoting in JSV sh library * Fix checking of consumables for parallel jobs across multiple hosts [U] * Enhancements * Additional and clarified documentation * PAM modules for ssh tight integration and access control for interactive jobs * Initial core binding support for Solaris/SPARC64 [U] * Some efficiency improvements and memory leaks fixed [U] * Ports to S/390 and PARISC GNU/Linux [U] * New complex m_thread [U] * Show topology by default in qhost [U] * qsub -pty switch [#704] [U] * Improved qmon graphics [#530] [(U)] * Include bash in default shell list [U] * A JSV that rejects all jobs [U] * Files for Scali-MPI * Ruby DRMAA implementation * Enable easy building against shared system libraries and use system openssl and bdb binaries * New scripts: "qsched" reports resource reservations; "status" wraps qstat; enable/disable submission; node-selection (idle etc.) * Restart argument for daemon init scripts * Improved efficiency of shell JSV if used with bash * Core dumps from crashing daemons enabled under Linux [U] * Example host_aliases file [#154] * Spec file for RPM packaging [#820] * Other changes (possibly-incompatible) * Show core binding by default in qstat, qhost (use -ncb for compatibility) [U] * Removed Berkeley DB RPC support (recently dropped by BDB) [U] * Changed position in pending job list for user-rescheduled jobs (exit99, qmod -rj) and OLD_RESCHEDULE_BEHAVIOR, OLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB parameters [U] * Unified GNU/Linux arch strings (lx-*, from lx24-* and lx26-*) [U] * Default to enabling core binding on GNU/Linux [U] * Removed Sun service tags support [U] * Removed obsolete SunHPCT5 files
2012-03-20 18:07:43 +01:00
.include "../../x11/Xbae/buildlink3.mk"
Mechanically replace all includes of buildlink3.mk of the following packages with the modular Xorg equivalent. Those are falling back to the old location by default, so this commmit doesn't change dependencies. graphics/xpm ==> x11/libXpm fonts/Xft2 ==> x11/libXft x11/Xfixes ==> x11/libXfixes x11/xcursor ==> x11/libXcursor x11/Xrender ==> x11/libXrender x11/Xrandr ==> libXrandr
2006-12-15 21:32:52 +01:00
.include "../../x11/libXpm/buildlink3.mk"
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
.include "../../security/openssl/buildlink3.mk"
If it's going to install tcl scripts, and use REPLACE_INTERPRETER on them, it needs to depend on tcl. PKGREVISION -> 4
2011-07-05 03:30:52 +02:00
.include "../../lang/tcl/buildlink3.mk"
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
.include "../../mk/motif.buildlink3.mk"
Add missing pam.bl3.mk. (but, it builds on LP64 platforms now. yay!)
2012-04-15 21:35:15 +02:00
.include "../../mk/pam.buildlink3.mk"
import sge-5.3p6 (Sun Grid Engine) The Grid Engine project is an open source community effort to facilitate the adoption of distributed computing solutions. Sponsored by Sun Microsystems and hosted by CollabNet, the Grid Engine project provides enabling distributed resource management software for wide ranging requirements from compute farms to grid computing.
2004-05-03 02:38:34 +02:00
.include "../../mk/bsd.pkg.mk"
Reference in a new issue Copy permalink