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biology/peak-classifier: Update to 0.1.4.13 

Updates for new libxtend API
This commit is contained in:
bacon 2023-10-28 20:37:17 +00:00
parent 2b4bc9b427
commit 7c39abfae8
4 changed files with 13 additions and 13 deletions
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9
biology/peak-classifier/DESCR
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Classify ChIP/ATAC-Seq peaks based on features provided in a GFF
Peaks are provided in a BED file sorted by chromosome and position. The GFF
must be sorted by chromosome and position, with gene-level features separated
by ### tags and each gene organized into subfeatures such as transcripts and
exons. This is the default for common data sources.
Peaks are provided in a BED file sorted by chromosome and position.
The GFF must be sorted by chromosome and position, with gene-level
features separated by ### tags and each gene organized into
subfeatures such as transcripts and exons. This is the default
for common data sources.

7
biology/peak-classifier/Makefile
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# $NetBSD: Makefile,v 1.12 2023/08/14 05:23:52 wiz Exp $
# $NetBSD: Makefile,v 1.13 2023/10/28 20:37:17 bacon Exp $
DISTNAME= peak-classifier-0.1.4.11
PKGREVISION= 1
DISTNAME= peak-classifier-0.1.4.13
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
GITHUB_TAG= 394f61cb00eadcd07b0d7d2df4631502c0aa46d4
GITHUB_TAG= fb89af3b2e976c2ccb42d861324aa40591f5cadb
OWNER= bacon@NetBSD.org
HOMEPAGE= https://github.com/auerlab/peak-classifier

2
biology/peak-classifier/PLIST
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@comment $NetBSD: PLIST,v 1.9 2023/08/12 14:52:46 bacon Exp $
@comment $NetBSD: PLIST,v 1.10 2023/10/28 20:37:17 bacon Exp $
bin/extract-genes
bin/feature-view
bin/filter-overlaps

8
biology/peak-classifier/distinfo
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$NetBSD: distinfo,v 1.11 2023/08/12 14:52:46 bacon Exp $
$NetBSD: distinfo,v 1.12 2023/10/28 20:37:17 bacon Exp $
BLAKE2s (peak-classifier-0.1.4.11-394f61cb00eadcd07b0d7d2df4631502c0aa46d4.tar.gz) = 4e78ebc54cf7c3e5c940ce9dfa1ee5ebcf124ef4bda52f0173ff93fa1e13c851
SHA512 (peak-classifier-0.1.4.11-394f61cb00eadcd07b0d7d2df4631502c0aa46d4.tar.gz) = 94f6cc97d40b251f006aba1bbc0262051b9070ea7fd13284156a508f544e1e46f38e35c66502e3478d67de47c547478d11c22a36090237dcbea21621d11e2200
Size (peak-classifier-0.1.4.11-394f61cb00eadcd07b0d7d2df4631502c0aa46d4.tar.gz) = 87358 bytes
BLAKE2s (peak-classifier-0.1.4.13-fb89af3b2e976c2ccb42d861324aa40591f5cadb.tar.gz) = 6f7f1bd00518dc39ecfa8fa0ab0c34436174c1366bec6e15708e255627c0dede
SHA512 (peak-classifier-0.1.4.13-fb89af3b2e976c2ccb42d861324aa40591f5cadb.tar.gz) = 9463b291b402613bed6a1bf4bda7d0a5508c95093eb48a5c336e42161745f66684ee86d7486f9f55505ef99faf48c1de567396e7f1e8869a587d3a96770f12d7
Size (peak-classifier-0.1.4.13-fb89af3b2e976c2ccb42d861324aa40591f5cadb.tar.gz) = 87434 bytes