biology/bcftools: Update to 1.12
biology/samtools: Update to 1.12
Numerous enhancements, performance improvements, and bug fixes since 1.10
Minimized pkgsrc patches in all three packages
Moved htslib to custom tarball since Github-generated distfiles are incomplete
Numerous enhancements and bug fixes since 1.9, including:
Elimited refernce file size limits
SAM header API
On-the-fly indexing
Improved Amazon S3 interface
This package contains a patch for recent libcurl not in the upstream release
HTSlib is an implementation of a unified C library for accessing common file
formats, such as SAM, CRAM, VCF, and BCF, used for high-throughput sequencing
data. It is the core library used by samtools and bcftools.
