Commit graph

2273 commits

Author SHA1 Message Date
seb
773980d78f Initial import of p5-Spreadsheet-ReadSXC version 0.20 in the NetBSD
Packages Collection.

The Perl 5 module Spreadsheet::ReadSXC extracts data from OpenOffice
1.x spreadsheet files (.sxc).
2009-02-01 09:04:02 +00:00
seb
5d2fb2d753 Update from version 0.4400 to version 0.4900 (upstream 0.49)
Upstream changes (it says 0.48 for the first changes entry but I guess the
author  really meant 0.49):
0.48 24 January 2009

    ! Added Text::CSV_XS to xls2csv() function to handle embedded commas
      in csv data. Reported by Fredrik Linde.
      https://rt.cpan.org/Ticket/Display.html?id=41337

    + Rewrote Utility.pm documentation.

    - Removed wantarray from ExcelFmt() and the unused and undocumented
      feature of returning the result and a format color in a list context.
      The older mechanism is still available but now requires an explicit flag.

0.48 23 January 2009

    ! Fixed bug where numbers with uppercase formats such as MM/DD/YY
      were ignored. Applies to files created by OpenOffice.org and
      some international versions of Excel. Added tests for above.
      http://rt.cpan.org/Public/Bug/Display.html?id=20526
      http://rt.cpan.org/Public/Bug/Display.html?id=31206
      http://rt.cpan.org/Public/Bug/Display.html?id=40307

    ! Removed undocumented and counter-intuitive use of overload on SheetNo in
      Worksheet.pm.
      http://rt.cpan.org/Public/Bug/Display.html?id=14278

0.47 22 January 2009

    ! Fixed bug where multiple embedded charts on a worksheet caused the
      worksheet order to be lost and data to get overwritten.
      Reported by Steven Martin and others.
      http://rt.cpan.org/Public/Bug/Display.html?id=13365

0.46 18 January 2009

    ! Heavily refactored the ExcelFmt() function for maintainability and
      fixed several bugs, in particular for 12 hour clock times.
      Added test cases for above.

    ! Removed use of $& match variables from ExcelFmt.
      Reported by Aaron Wigley.
      http://rt.cpan.org/Public/Bug/Display.html?id=42425

    ! Replaced lvalue substr() in ExcelFmt () with 4-arg substr()
      for efficiency. Reported by Goro Fuji.
      http://rt.cpan.org/Public/Bug/Display.html?id=42518

    ! Removed spurious t/examples dir from Makefile.PL and removed
      unused t/lib dir. Reported by Peter (Stig) Edwards.
      http://rt.cpan.org/Public/Bug/Display.html?id=42442

0.45 13 January 2009

    ! Fixed failed parsing of large (8-16k) Unicode strings.
      Reported by Graham Stead and Moka.
      http://rt.cpan.org/Public/Bug/Display.html?id=41813
      http://rt.cpan.org/Public/Bug/Display.html?id=35678

    ! Fixed critical bug where data rows could be ignored.
      Reported and isolated by Peter (Stig) Edwards.
      http://rt.cpan.org/Public/Bug/Display.html?id=30677
2009-01-31 16:16:05 +00:00
asau
da45eeb096 Update to FriCAS 1.0.5, change default Lisp to CLISP.
Changes since FriCAS 1.0.4:

- improvement to normalize function, it performs now much
  stronger simplifications than before
- better integration: due to improved normalize FriCAS can
  now integrate many functions that it previously considered
  unintegrable
- improvement to Martin Rubey guessing package, for example
  it can now guess differential equation for the generating
  function of integer partitions
- better support for using type valued functions
- several bug fixes


Changes since FriCAS 1.0.3:

User Interface:
- Add a new emacs mode: just (require 'fricas), M-x fricas and enjoy.
- Add support for inline display of LaTeXed code.
- Add support for mouse wheel.
- Supress SBCL style warnings due to autoloading.

Merge Ralf's wonderful new Aldor interface.
Allow calling type-valued functions.
Improve coercion of types.
Add coercions to InputForm.
Improve unparse.
Use SExpression as representation of OutputForm.
Miscellaneous improvements, bug fixes and cleanups.


Approved by <obache>.
2009-01-27 15:54:23 +00:00
markd
1e30aa7089 Update eigen2 to 2.0-beta6
changes unspecified - better handling of systems without posix_memalign.
2009-01-27 12:22:46 +00:00
asau
331426e08b Add DESTDIR support.
Approved by <tnn>.
2009-01-27 12:04:14 +00:00
jschauma
65e9c90d89 Give up maintainership, as I have not so much as looked at pkgsrc in
well over a year now.  Sorry. :-(
2009-01-23 21:14:16 +00:00
drochner
10b3840eb3 update to 1.8.4
changes: bugfixes
2009-01-20 20:43:09 +00:00
he
7ad7d7db57 Update from version 3.1.2 to 3.2, to bring this in line with
the version in math/fftw/.

Pkgsrc changes:
 o Get rid of the powerpc-specific distfile, it's apparently not needed
   anymore
 o Add perl as a tool, so that "make test" can succeed
 o Adjust dependency on math/fftw
2009-01-18 13:00:07 +00:00
obache
ee0ec3fff1 Add REPLACE_OCTAVE feature. 2009-01-18 02:43:38 +00:00
adam
a73e809cc1 Changes 4.35:
* New API routines were added to the package.
* A minor change were made in the internal routine xputc.
* A minor bug was fixed in the internal routine mpl_fn_time2str.
2009-01-17 23:36:22 +00:00
he
a3206e4517 Update from version 0.4200 to 0.4400 (upsteream 0.44).
Pkgsrc changes:
 o Adjust dependencies to fit requirements

Upstream changes:

0.44 8 January 2009

    ! Fix for OpenOffice.org GENERAL format.
      http://rt.cpan.org/Public/Bug/Display.html?id=7206
      Thanks to Niko Tyni and the Debian Perl team

    + Perltidyed source and added standard headers and Pod sections
      to all modules.

0.43 7 January 2009

    + Restructured and rewrote the main documentation. This is the start of
      a general refactoring. If you would like to keep up to date with it
      keep an eye on the Spreadsheet::ParseExcel Google Group.
      http://groups.google.com/group/spreadsheet-parseexcel

    + Added worksheets() Workbook method to iterate over the Worksheet objects.

    + Added unformatted() method to get a Cell's unformatted value.

    + Renamed public methods RowRange(), ColRange() and Cell() to row_range(),
      col_range() and get_cell(). Old methods are still available.

    ! Turned on compatibility_mode() by default in SaveParser to avoid SP3
      problems.

    ! Fixed minor SaveParser bug with font rotation.
      http://rt.cpan.org/Public/Bug/Display.html?id=41626
2009-01-12 23:25:49 +00:00
wiz
df94dbc03f Update to 5.24.3:
Overview of changes in gcalctool 5.24.3

    * Updated documentation: de (Christian Kirbach).
2009-01-12 21:07:32 +00:00
markd
106d9b51cd posix_memalign() only in recent NetBSD's so use malloc() instead. 2009-01-11 11:45:11 +00:00
markd
aa48a78d54 Use posix_memalign() on NetBSD. Bump PKGREVISION. 2009-01-11 10:11:48 +00:00
markd
9e4f0111af add eigen2 2009-01-10 01:04:01 +00:00
markd
e47a540440 Initial import of eigen 2.0beta5
Eigen 2 is a C++ template library for linear algebra: vectors, matrices, and
related algorithms. It is:
* Versatile. Eigen handles, without code duplication, and in a completely
  integrated way:
  o both fixed-size and dynamic-size matrices and vectors.
  o both dense and sparse (the latter is still experimental) matrices and
    vectors.
  o both plain matrices/vectors and abstract expressions.
  o both column-major (the default) and row-major matrix storage.
  o both basic matrix/vector manipulation and many more advanced, specialized
    modules providing algorithms for linear algebra, geometry, quaternions,
    or advanced array manipulation.
* Fast.
  o Expression templates allow to intelligently remove temporaries and enable
    lazy evaluation, when that is appropriate -- Eigen takes care of this
    automatically and handles aliasing too in most cases.
  o Explicit vectorization is performed for the SSE (2 and later) and AltiVec
    instruction sets, with graceful fallback to non-vectorized code.
    Expression templates allow to perform these optimizations globally for
    whole expressions.
  o With fixed-size objects, dynamic memory allocation is avoided, and the
    loops are unrolled when that makes sense.
  o For large matrices, special attention is paid to cache-friendliness.
* Elegant. The API is extremely clean and expressive, thanks to expression
  templates. Implementing an algorithm on top of Eigen feels like just copying
  pseudocode. You can use complex expressions and still rely on Eigen to
  produce optimized code: there is no need for you to manually decompose
  expressions into small steps.
* Compiler-friendy. Eigen has very reasonable compilation times at least with
  GCC, compared to other C++ libraries based on expression templates and heavy
  metaprogramming. Eigen is also standard C++ and supports various compilers.
2009-01-10 01:02:47 +00:00
asau
6abaa16949 Change category to "math" for consistency.
Discussed with tnn@.
2009-01-07 00:00:15 +00:00
he
2e80e73801 Update from version 0.41 to 0.42.
Upstream changes:

0.42 1 January 2009
    + Fix for world writeable files in distro to allow PAUSE indexing.
2009-01-05 13:55:24 +00:00
wiz
55fa90af5f Move scrollkeeper/omf.mk to rarian/omf.mk.
scrollkeeper is nowadays included in rarian, so the omf.mk file should
be there as well.
Adapt all references.
2009-01-04 18:00:58 +00:00
joerg
07bb0d6a4e Needs pkg-config. 2008-12-23 18:27:28 +00:00
minskim
bcea21c41a Update maxima to 5.17.1, based on wip/maxima, which was updated
and tested by Aleksej Saushev and Stathis Kamperis.

Major changes:
- Expand code for special functions
- quad_qagi accepts upper and lower limits instead of flags for limits
- Cut out solve_inconsistent_error
- new, alternate implementation of vector operations
- colorterm: simple output color-coding
2008-12-21 05:04:28 +00:00
minskim
a4a274cfdb Update mathomatic to 14.2.7.
Numerous improvements since 14.0.5. See
http://mathomatic.orgserve.de/changes.txt for the complete list of changes.
2008-12-21 02:02:25 +00:00
reed
2d7478df46 Improve COMMENT and DESCRiptions.
No longer identical.
Don't say Linux since this is for other platforms too.
Don't mention GUI interface in the description for the console package.

By the way, the gtk version is really GNOME, but upstreams calls it gtk.
2008-12-20 18:47:00 +00:00
tnn
3717a16dbf Update to gsl-1.12. From Aleksej Saushev in PR pkg/40200.
This is a maintenance release, which fixes reported bugs and upgrades
the build system to the latest libtool, autoconf and automake.
2008-12-19 23:16:22 +00:00
markd
fff99780da Add py-numpy and py-scipy 2008-12-19 22:16:03 +00:00
markd
7a12b44027 Initial import of py-scipy 0.6.0
SciPy is an open source library of scientific tools for Python. SciPy
supplements the popular Numeric module, gathering a variety of high level
science and engineering modules together as a single package.

SciPy includes modules for graphics and plotting, optimization, integration,
special functions, signal and image processing, genetic algorithms, ODE
solvers, and others.
2008-12-19 22:14:28 +00:00
markd
b4f920b599 user-destdir support. 2008-12-19 22:09:55 +00:00
markd
c59b321927 Initial import of py-numpy 1.1.0
NumPy is a general-purpose array-processing package designed to
efficiently manipulate large multi-dimensional arrays of arbitrary
records without sacrificing too much speed for small multi-dimensional
arrays.  NumPy is built on the Numeric code base and adds features
introduced by numarray as well as an extended C-API and the ability to
create arrays of arbitrary type.

There are also basic facilities for discrete fourier transform,
basic linear algebra and random number generation.

Pkgsrc issue: if the package build happens to find a fortran it prefers
over the one pkgsrc is using it will try to use it and the wrong thing
will happen.
2008-12-19 22:04:36 +00:00
adam
1c894005a1 Changes 4.34:
* The GNU MathProg modeling language was supplemented with three
  new built-in functions:
	gmtime    obtaining current calendar time
	str2time  converting character string to calendar time
	time2str  converting calendar time to character string
* For detailed description of these functions see Appendix A in
  the document "Modeling Language GNU MathProg", a new edition of
  which was included in the distribution.
* A bug was fixed in the MIP solver.
* A new makefile was added to build the GLPK DLL with Microsoft
  Visual Studio Express 2008 for 64-bit Windows.
2008-12-19 19:47:38 +00:00
joerg
4ecaf785e5 Fix build with newer bison. 2008-12-19 14:04:07 +00:00
tnn
14d7ed9d10 Update to algae-4.3.6. From Aleksej Saushev.
Version 4.3.6 (February 22, 2004)
* Fixed a label handling error in the `set' function that was
  introduced in version 4.3.1.  Also cleaned up and documented
  Label handling in `complement', `intersection', and `union'.

Version 4.3.5 (February 11, 2004)
* Added support for short int endian conversions in `fread'.  This
  was a quick fix -- we really need to go through that code (and
  `fwrite') to clean it up and support a variety of missing cases.

Version 4.3.4 (December 16, 2003)
* Fixed disassemble bug causing wipeout on `veil' statement.
* Now use --enable-debug instead of --with-debug in configure.
  (It was and has been broken since version 4.3.0.)

Version 4.3.3 (December 9, 2003)
* By default, use Doug Lea's dlmalloc package in place of the
  C library's malloc.  On some systems, dlmalloc is far superior.
  For example, Algae's timing suite runs 2.5 times faster with
  dlmalloc than with the AIX 5.1 malloc routines.  (On Linux,
  dlmalloc is the default anyway.)
* Replaced code for `magic' with faster code from Octave.
* Supplied some missing prototypes that caused trouble.
* Quit installing header files.  Not sure how or why that got
  started, but if you have installed previous versions of Algae,
  you may have junk left around in /usr/src/algae.

Version 4.3.2 (November 29, 2003)
* Ouch!  Fixed a nasty bug in `filter'.

Version 4.3.1 (November 24, 2003)
* Several efficiency improvements, some pretty dramatic.
* Short ints supported in `fread' and `fwrite'.
* New functions `erf', `erfc', `gcd', `lcm', `primef', `primes', and
  `trapz'.

Version 4.3.0 (October 4, 2003)
* Enable linking to fftw (http://www.fftw.org/) for high-performance
  Fourier transforms.
* The `fft' and `ifft' functions now handle matrices.  By default
  they transform each column, but that can be changed with an option.
* The `max' and `min' (and `imax' and `imin') functions now handle
  matrix and table arguments.  Note:  The old versions converted
  matrix arguments to vectors, if possible; the new versions may
  give different results in those cases.

* The new `circshift' function performs circular shifts of arrays.
* Minor code changes to support Mac OS X.
* Fixed several potential buffer overrun problems.
* Included latest (3 June 2003) SuperLU updates.
* Included current ARPACK patches.

Version 4.2.1 (August 6, 2003)
* Added the `$digits' global variable.

Version 4.2.0 (August 5, 2003)
* New `veil' statement allows temporary changes to global variables.

Version 4.1.4 (August 2, 2003)
* Improved configuration for floating point exception handling.
* Added numerous "volatile" qualifiers, to protect against longjmp
  problems with optimized gcc.
* Fix `select' function for zero-length vectors.
2008-12-14 13:19:15 +00:00
wiz
2cc0163696 + texdrive. 2008-12-09 12:20:35 +00:00
wiz
3a087ae2cb Initial import of texdrive-0.0.20081126:
texdrive is an emacs minor-mode for adding mathematical equations
to html-pages; things like Euler's identity, Pythagoras theorem
and so on.
2008-12-09 12:19:59 +00:00
ahoka
1d6bfa069d MAKE_JOBS_SAFE= no 2008-12-05 19:02:09 +00:00
wiz
eb733f7f5c Update to 5.24.2:
Overview of changes in gcalctool 5.24.2

    * Re-enable trigonometric types which have been disabled since 2.24.0 (Robert Ancell, Bug #559575)

    * Remember setting to ignore change mode warning between instances (Robert Ancell, Bug #556407)

    * Always read configuration from /apps/gcalctool not /apps/(appname) as
      the application name is different when symlinked (Matt Keenan, Bug #559260).

    * Open help with gtk_show_uri() (Thomas Andersen, Bug #556207).

    * Removed double conversion in boolean and 32 bit and 16 bit mask operations so
      they can handle larger numbers (Robert Ancell, Bug #509988)

    * Updated translations: et (Ivar Smolin), pt_BR (Leonardo Ferreira Fontenelle), uk (Maxim Dziumanenko).
2008-12-02 13:35:11 +00:00
adam
e7f4d5c8a2 Changes 3.2:
* Worked around apparent glibc bug that leads to rare hangs when freeing
  semaphores.
* Fixed segfault due to unaligned access in certain obscure problems
  that use SSE and multiple threads.
* MPI transforms not included, as they are still in alpha; the alpha
  versions of the MPI transforms have been moved to FFTW 3.3alpha1.
* Performance improvements for sizes with factors of 5 and 10.
* Documented FFTW_WISDOM_ONLY flag, at the suggestion of Mario
  Emmenlauer and Phil Dumont.
* Port Cell code to SDK2.1 (libspe2), as opposed to the old libspe1 code.
* Performance improvements in Cell code for N < 32k, thanks to Jan Wagner
  for the suggestions.
* Cycle counter for Sun x86_64 compiler, and compilation fix in cycle
  counter for AIX/xlc (thanks to Jeff Haferman for the bug report).
* Fixed incorrect type prefix in MPI code that prevented wisdom routines
  from working in single precision (thanks to Eric A. Borisch for the report).
* Added 'make check' for MPI code (which still fails in a couple corner
  cases, but should be much better than in alpha2).
* Many other small fixes.
2008-11-18 11:13:06 +00:00
he
6ceb5f397b Updated from version 2.23nb1 to 2.25.
Upstream changes:

2.25 September 9 - Minor

    + Fix for set_properties() bug due to 5.10/5.8 UTF-8 differences.
    + Fix for failing tests due to localtime() issues.

2.24 September 6 - Minor

    + Added set_properties() method to set document properties.
      Added test suite and example.
2008-11-18 06:11:01 +00:00
he
9f252fad80 Update from version 0.32nb1 to 0.41.
Pkgsrc changes:
 o Update to use Module::Build
 o Adjust MASTER_SITES, dist not present in common directory
   (reported upstream)

Upstream changes:

0.41 24 October 2008

    + Changed maintainership to John McNamara.

    ! Fixed bug when parsing RK numbers (generally ints or small floats).
      http://rt.cpan.org/Public/Bug/Display.html?id=39892

    ! Changed margin units to inches to (cleanly) avoid undef warning in
      SaveParser.


0.33 2008.09.07
    - Default format for formatted dates changed from 'm-d-yy' to 'yyyy-mm-dd'
    - Numeric fields with date-formats now promote to Date
    - Added docs about date type 14 problem
    - skip another test when prereq is missing
    - split Spreadsheet::ParseExcel::SaveParser into packages
    - split Spreadsheet::ParseExcel into packages
2008-11-18 06:03:58 +00:00
he
8ea9a718fb Update from version 2.04nb1 to 2.05.
Pkgsrc changes:
 o Add a patch to make ExtUtils::MakeMaker emit use of the gmp
   library.  Actual use will be handled by bulidlink / wrapper.
 o Added commented-out extra modules which can be optionally
   used during "make test" if various TEST_* environment variables
   are set.

Upstream changes:

2.05  2008-10-06 Greg
    - New maintainer: Greg Sabino Mullane
    - Allow tests to work on 64-bit platforms. Patch from Flo.
      (CPAN bugs #5960, #30327, #27641, #12751, #15459)
    - Add support for probab_prime function. Patch by shlomif@iglu.org.il.
      (CPAN bug #6184)
    - Get smarter about detecting lack of GMP libraries.
      (CPAN bug #18709)
    - Add META.yml and some more tests.
2008-11-18 05:46:55 +00:00
chuck
41bffb4c96 import compile fixes from devel branch 1.9.3... must define
NO_IMPORT_PYGOBJECT in plugins/python-loader to avoid link
errors
2008-11-15 02:02:13 +00:00
dmcmahill
b67b31dc45 Address tmp file vulnerability noted at
http://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2008-4983

Bump pkgrev.
2008-11-15 01:19:08 +00:00
wiz
285b7dd776 Bump PKGREVISION for libXaw API depends bump due to libXaw8 removal. 2008-11-10 17:21:33 +00:00
adam
b24b44f4d0 Changes 4.33:
* New API routines
* A crude implementation of CPLEX-like interface to GLPK API was
  added to the package. Currently it allows using GLPK as a core
  LP solver for Concorde, a well known computer code for solving
  the symmetric TSP.
* Some bugs were fixed in the SQL table driver.
2008-11-07 20:01:29 +00:00
jwise
1a38f1ecdc Remove octave-current. 2008-11-07 16:00:25 +00:00
jwise
92df7ab249 Per discussion with maintainer, remove octave-current, which is
substantially less current than the current octave.
2008-11-07 15:59:57 +00:00
snj
b9f5ac7585 Update to 5.1. Now uses gtk2. Changes are mostly small bugfixes and UI
tweaks.  See bundled changelog for full details.
2008-11-02 16:56:15 +00:00
abs
d88b581d63 Added math/p5-Math-BaseCnv 2008-10-26 19:16:19 +00:00
abs
3fd54eeef8 Added math/p5-Math-BaseCnv version 1.4.75
BaseCnv provides a few simple functions for converting between
arbitrary number bases. It is as fast as I currently know how to
make it (of course relying only on the lovely Perl). If you would
rather utilize an object syntax for number-base conversion, please
see Ken Williams's <Ken@Forum.Swarthmore.Edu> fine Math::BaseCalc
module.
2008-10-26 19:12:13 +00:00
adam
b6441dac9f Changes 3.0.3:
* Bug fixes
* Improvements
2008-10-25 08:26:12 +00:00
wiz
ac3ab8d6a7 Update to 5.24.1:
Overview of changes in gcalctool 5.24.1

    * Fixed GtkSpinButton warning (Robin Sonefors, Bug #553965)

    * Only update bit panel when display contains a solved number (Bug #548690).

    * gcalctool/gtk.c: Remove inline declaration so can compile in C89 (Jens Granseuer, Bug #553307).

    * Updated translations: ar (Anas Afif Emad), bg (Alexander Shopov), pt_BR (Vladimir Melo).

Overview of changes in gcalctool 5.24.0

    * Updated translations: af (Friedel Wolff), ar (Anas Afif Emad, Khaled Hosny),
                            bn_IN (Sankarshan Mukhopadhyay), da (Kenneth Nielsen),
                            dz (Pema Geyleg), gu (Sweta Kothari),
                            hr (Robert Sedak), hu (Gabor Kelemen),
			    it (Luca Ferretti), kn (Shankar Prasad),
			    ko (Changwoo Ryu), lt (Gintautas Miliauskas),
                            ml (Sreejith K incorporated, Praveen Arimbrathodiyil),
                            mr (Sandeep Shedmake), ro (Mişu Moldovan),
                            sq (Laurent Dhima), ta (Tirumurthi Vasudevan),
                            te (Krishnababu K), tr (Baris Cicek),
                            zh_CN (Funda Wang)

    * Updated help: es (Jorge Gonzalez)
----

Overview of changes in gcalctool 5.23.92

    * Updated translations: en_GB (Philip Withnall), ca (Gil Forcada),
                            bg (Alexander Shopov)

----

Overview of changes in gcalctool 5.23.91

    * Fix packing for modulus button (Bug #548880)

    * Change from OnlyShowIn=GNOME;XFCE; to NotShowIn=KDE; so
      other desktops can use GCalctool (bug #518862).

----

Overview of changes in gcalctool 5.23.90

    * Fix some small memory leaks (Felix Riemann, Bug #547942)

    * More work tidying up MP code (Klaus Niederkrueger, Robert Ancell, Bug #524091)

    * Updated translations: ar (Khaled Hosny), fi (Ilkka Tuohela), he (Yair Hershkovitz), ja (Takeshi Aihana), pt (Duarte Loreto), sk (Marcel Telka)

    * Updated documentation: ru (Yuriy Penkin)

----

Overview of changes in gcalctool 5.23.6

    * Deprecated left-to-right mode (Bug #500994).

    * Updated remaining documentation (bg, zh_CN, zh_HK, zh_TW) to gnome-doc-utils (Robert Ancell, Bug #336104)

    * Changed icon from deprecated 'gnome-calculator' to 'accessories-calculator') (Matthias Clasen, Bug #545074)

    * Updated translations: ar (Djihed Afifi), fr (Claude Paroz), pt_BG (Fabrício Godoy)

----

Overview of changes in gcalctool 5.23.5

    * Fix regression in factorial operation (Klaus Niederkrueger)

    * Made trigonometric button text translatable (Yuri Penkin, Bug #540196)

    * More work tidying up MP code (Klaus Niederkrueger, Robert Ancell, Bug #524091)

    * Updated Japanese documentation to gnome-doc-utils (Claude Paroz, Takeshi Aihana, Bug #336104)

    * Updated translations: ca (Joan Duran), oc (Yannig Marchegay), ru (Yuriy Penkin), sv (Daniel Nylander), th (Theppitak Karoonboonyanan)

----

Overview of changes in gcalctool 5.23.4

    * Added workaround to stop display disappearing when editing large displays (Bug #524602)

    * Applied second mp math tidy up patch from  Klaus Niederkrueger (Bug #524091)

    * Updated translations: ar (Djihed Afifi)

----

Overview of changes in gcalctool 5.23.3

    * Default to no thousands separator not ',' for locales that do not require one (Bug #527669)

    * Updated translations: ar (Djihed Afifi), et (Ivar Smolin), vi (Clytie Siddall)

----

Overview of changes in gcalctool 5.23.2

    * Fixes the cursor from moving around when editing numbers with thousands separators (Bug #527669)

    * Structural changes in preperation for full unicode support (Bug #530532)

    * Updated translations: es (Jorge González), gl (Ignacio Casal Quinteiro), nb (Kjartan Maraas),
      nl (Tino Meinen), pt_BR (Leonardo Ferreira Fontenelle), sl (Matej Urbančič)

----

Overview of changes in gcalctool 5.23.1

    * Fixes a number of compiler warnings (Bugs #526976, #526702, #527318)

    * Fixes incorrect negation precedence (Bug #526094)

    * Fixes issues with thousands seperators and radix in non-english
      locales (Bug #527669)

    * Fixes regression in constant and function menus (Bug #527545)

    * Fixes problem where display is invisible after solving equation
      (Bug #524602)
2008-10-25 00:43:23 +00:00
he
c2b6ab8812 Add p5-Excel-Template-Plus. 2008-10-20 22:59:00 +00:00
he
a311d22bc4 Import p5-Excel-Template-Plus version 0.04.
This module is an extension of the Excel::Template module, which
allows the user to use various "engines" from which you can create
Excel files through Excel::Template.
2008-10-20 22:57:45 +00:00
he
33c5b78803 Added p5-Excel-Template. 2008-10-20 22:42:13 +00:00
he
b73ae5a0fa Import p5-Excel-Template version 0.31.
This is a module used for templating Excel files. Its genesis came
from the need to use the same datastructure as HTML::Template, but
provide Excel files instead. The existing modules don't do the
trick, as they require replication of logic that's already been
done within HTML::Template.
2008-10-20 22:41:15 +00:00
he
b021813da0 Bump the PKGREVISION for all packages which depend directly on perl,
to trigger/signal a rebuild for the transition 5.8.8 -> 5.10.0.

The list of packages is computed by finding all packages which end
up having either of PERL5_USE_PACKLIST, BUILDLINK_API_DEPENDS.perl,
or PERL5_PACKLIST defined in their make setup (tested via
"make show-vars VARNAMES=...").
2008-10-19 19:17:40 +00:00
markd
f0aa215f11 fixup patch from previous. 2008-10-14 22:41:44 +00:00
markd
be58740a08 Add R-sp and R-circular 2008-10-14 09:40:08 +00:00
markd
0cdcc92b1b Update R-gstat to 0.9.51
many bug fixes
2008-10-14 08:24:23 +00:00
markd
de62564903 Update R-geoR to 0.9.26
Changes unknown
2008-10-14 08:19:07 +00:00
markd
5820bed8fb Initial import of R-sp version 0.9.26
A package that provides classes and methods for spatial data. The classes document
where the spatial location information resides, for 2D or 3D data. Utility functions
are provided, e.g. for plotting data as maps, spatial selection, as well as methods
for retrieving coordinates, for subsetting, print, summary, etc.
2008-10-14 08:15:24 +00:00
markd
524e4b86ae Update R-clim.pact to 2.2.15
Changes unknown
2008-10-14 08:00:31 +00:00
markd
8bdea11266 Update R-genetics to 1.3.4
genetics 1.3.4 - 2008-08-20
---------------------------

- Fix bug in makeGenotypes that caused it to ignore the 'sep' argument
  when determining which columns contain genotypes & add a corresponing
  regression test


genetics 1.3.3 - 2007-04-29
---------------------------

- Correct 'obsolete' use of '$'.  R no longer permits '$' to be used
  to extract named elements from vectors (just lists).

- Remove the power.casectl() function, which was based on invalid
  assumpations.  It has been marked depreciated.  Please use the
  functions in the Bioconductor package 'GeneticsDesign' instead.

genetics 1.3.2 - 2007-11-20
---------------------------

- Fix bug in handling of assignment of NA value(s) to elements of an
  existing genotype object.

- Fix warning messages from R CMD CHECK

- Correct documentation error by swapping definitions of kp and alpha
  arguments of power.casectl().

genetics 1.3.1
--------------

- fixes in genotypeOrder to ensure all genotype/haplotype combinations
  are used.

- genotypeOrder<- is now exported

genetics 1.3.0
--------------

- A note is now displayed on startup:

  The R-Genetics project has developed an set of enhanced genetics
  packages that will shortly replace 'genetics'. Please visit the
  project homepage at http://rgenetics.org for more information.

- binsearch() has been moved to the gtools package

- New function groupGenotype to create groups/levels based on genotype
  names

- Added some internal utility functions
  (.genotype2Haplotype, .genotype2Allele, and .matchGenotype)

- Genotype class gets additional slot genotypeOrder (and genotype()
  function gets additional argument with the same name) in order to enable
  predefined order of genotypes in other functions e.g. summary

- Added order, sort and %in% methods for genotype and haplotype classes.

- Fixed genotype() with allow.partial.missing=FALSE when 'alleles' argument
  is passed

- There is no more warning in genotype() if 'a1' or 'a2' have NA value(s)
  and 'alleles'' argument is specified, since NA is NA anyway

- Fixed documentation of power.casectrl()

- added gtools to Depends as needed by expectedGenotypes(); the latter now
  gives sorted genotypes according to order of given alleles

- print.HWE.test() wasn't displaying the observed vs expected genotype
  frequency table.  Fixed.

genetics 1.2.1
--------------

- Update Greg's email address

- Fixed a bug in function allele.number, as pointed out by Chris
  Wallace
2008-10-14 07:38:26 +00:00
markd
0a301a0c71 Update R-gdata to 2.4.2
CHANGES IN 2.4.2 (2008-05-11)
-----------------------------

- Enhancements and bug fixes for read.xls() and xls2csv():

    - More informative log messages when verbose=TRUE

    - File paths containing spaces or other non-traditional characters
      are now properly handled

    - Better error messages, particularly when perl fails to generate
      an output .csv file.

    - The 'shortcut' character "~" (meaning user's home directory) is
      now properly handled in file paths.

    - XLS files created by OpenOffice are now properly handled.  Thanks to
       Robert Burns for pointing out the patch
       (http://rt.cpan.org/Public/Bug/Display.html?id=7206)

CHANGES IN 2.4.1 (2008-03-24)
-----------------------------

- Update perl libraries needed by xls2csv() and read.xls()
  to latest available versions on CRAN.

- Add read.xls() to exported function list

- Correct iris.xls example file.  It didn't contain the complete
  & properly formatted iris data set. Fixed.

- Fix typo in win32 example for read.xls()

CHANGES IN 2.4.0 (2008-01-30)
-----------------------------

- The keep() function now includes an 'all' argument to specify how
  objects with names starting with '.' are handled.

- keep() now shows an informative warning message when a requested
  object does not exist

- New vignette "Mapping Levels of a Factor" describing the use of
  mapLevels().

- New vignette "Working with Unknown Values" describing the use of
  isUnknown() and unknownToNA().

- Several enhancements to read.xls() (thanks to Gabor Grothendieck):

  - New function xls2csv(), which handles converting an xls file
    to a csv file and returns a connection to the
    temporary csv file

  - xls2csv() and read.xls() both allow a file or a url to be specified

  - read.xls() has a new 'pattern' argument which, if supplied,
    will ignore everything prior to the first line in th csv file
    that matches the pattern.  This is typically used if there
    are a variable number of comment lines prior to the header
    in which case one can specify one of the column
    headings as the pattern.  read.xls should
    be compatible with the old read.xls.

- Minor fixes to drop.levels(), is.what().

- Implementation of unit tests for most functions.

CHANGES IN 2.3.1 (2006-10-29)
-----------------------------

- Arguments as well as their position of reorder.factor have been changed
  to conform with reorder.factor method in stats package, due to collision
  bug. Argument 'make.ordered' is now 'order' and old argument 'order' is
  now 'new.order'! Therefore, you have to implicitly specify new.order i.e.

  reorder(trt, new.order=c("PLACEBO", "300 MG", "600 MG", "1200 MG"))

- trim() gains ... argument.

- Added "unknown" methods for matrices.

- Added c() method for factors based on mapLevels() functions.

- Added write.fwf, which writes file in *F*ixed *W*idth *F*ormat.

CHANGES FROM 2.1.X to 2.3.0 (2006-09-19)
---------------------------------------

- Added mapLevels(), which produces a map with information on levels and/or
  internal integer codes.  Contributed by Gregor Gorjanc.

- Extended dropLevels() to work on the factors contained in a data
  frame, as well as individual factors.

- Add unknown(), which changes given unknown value to NA and vice
  versa. Contributed by Gregor Gorjanc.

- Extended trim() to handle a variety of data types data.frames,
  lists, factors, etc.  Code changes contributed by Gregor Gorjanc.

- Added resample() command that acts like sample() except that it
  _always_ samples from the arguments provided, even if only a single
  argument is present.  This differs from sample() which behaves
  differently in this case.

- Updated my email address.
2008-10-14 07:31:26 +00:00
markd
b9756076fa Update R-Rcmdr to 1.4.2
Changes unknown
2008-10-14 07:25:31 +00:00
markd
48eb9ac3cf Update R-wle to 0.9.3
Changes unknown
2008-10-14 07:16:50 +00:00
markd
b2f8b87041 Initial import of R-circular version 0.3.8
Circular Statistics, from "Topics in circular Statistics".
2008-10-14 07:12:44 +00:00
markd
88fc959826 Update R-gtools to 2.5.0
gtools 2.5.0
------------

New features:

- Add checkRVersion() function to determin if a newer version of R is
  available.

- Deprecated assert() in favor of base::stopifnot

Bug fixes:

- Fix bug in binsearch() identified by 2.6.0 R CMD CHECK

Other changes:

- Improve text explanation of how defmacro() and strmacro() differ from
  function().

- Update definitions of odd() and even() to use modulus operator
  instead of division.

gtools 2.4.0
------------

- Add binsearch() function, previously in the genetics() package.


gtools 2.3.1
------------

- Add ask() function to prompt the user and collect a single response.


gtools 2.3.0
------------

- Update email address for Greg

- Add new 'smartbind' function, which combines data frames
  efficiently, even if they have different column names.
2008-10-14 06:51:09 +00:00
markd
dfccae158f Update R-httpRequest to 0.0.6
Changes unknown
2008-10-14 06:44:25 +00:00
markd
88eef5c677 Update R-hwde to 0.5
Changes unknown
2008-10-14 06:41:35 +00:00
markd
7bcdb60f06 Update R-lmm to 0.3.5
Changes unknown
2008-10-14 06:38:21 +00:00
markd
3e92108ae2 Update R-mapproj to 1.1.7.2
Changes unknown
2008-10-14 06:01:48 +00:00
markd
5f8ecffb15 Update to R-maps 2.0.40
Changes unknown
2008-10-14 05:54:25 +00:00
markd
69f1d0afb2 Update R-mvtnorm to 0.9.2
Changes unknown.
2008-10-14 05:47:36 +00:00
markd
512e2a4c89 Fix homepage. 2008-10-14 05:42:14 +00:00
markd
f5cdb0f9f4 Update R-pixmap to 0.4.9
Changes in pixmap version 0.4-9

   o Fixed a minor glitch in write.pnm.

Changes in pixmap version 0.4-8

  o Fixed a bug that prevented plotting images with only 1 row (bug
    report by Robert Esswein).

Changes in pixmap version 0.4-7

  o Use LazyLoad instead of SaveImage.

Changes in pixmap version 0.4-6

  o Modified one of the regression tests for changes in R 2.4:
    terrain.colors() now return transparency information
    -> do not use it in example.

Changes in pixmap version 0.4-5

  o standardized license filed in DESCRIPTION file.
2008-10-14 05:35:47 +00:00
markd
b60b86cf34 Update R-statmod to 1.3.6
Changes unknown
2008-10-13 19:28:48 +00:00
markd
970e528486 Update R-shapefiles to 0.6
Changes unknown.
2008-10-13 19:27:42 +00:00
markd
24775ec760 Update R-sgeostat to 1.0.21
minor bugfixes.
2008-10-13 19:26:12 +00:00
markd
bde5851c2c Update R-date to 1.2.26
2007-12-24  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-26.

	* R/date.R (summary.date): Add ... so that na.rm can be used,
	Suggested by Steven McKinney <smckinney@bccrc.ca>.

2007-07-12  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-25.
	(License): Clarify.

2007-02-01  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* inst/CITATION: Get date/year and version from the package
	metadata.

2006-12-19  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-23.

	* R/date.R (as.character.date): Add missing ... argument.

2006-09-29  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-22.

	* R/date.R: Fix invalid escapes.

2006-09-09  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-21.
	(Depends): Added.

2006-08-05  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-20.

	* man/as.date.Rd: Fix inconsistency spotted by Antony Unwin
	<unwin@math.uni-augsburg.de>.

2006-06-26  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-19.

	* inst/CITATION: New file.
2008-10-13 11:38:19 +00:00
markd
9e10abaea4 Fix homepage. 2008-10-13 11:35:13 +00:00
markd
f1a3bd0792 Update R-chron to 2.3.24
4 years of updates.
2008-10-13 11:34:21 +00:00
markd
9400160ed8 Fix homepage. 2008-10-13 11:31:32 +00:00
markd
db49826f4a Fix homepage. 2008-10-13 11:30:50 +00:00
markd
bbeebe2dbf Update R-RArcInfo to 0.4.7
Changes Unknown
2008-10-13 11:29:42 +00:00
markd
6b8ff16b48 Update R-R2HTML to 1.59
# 2008-05-23 - Version 1.59

- Corrected call of unexported function from
  Sweave.R (utils package) in RweaveHTMLWritedoc.

- Corrected explicit call of S3Method print from
  package xtable.

- Corrected explicit call of S3Method from package
  nnet.

- Corrected explicit call of isInitialized from
  nlme package.

- Corrected explicit call of volume from
  cluster package.

- Corrected explicit calls of imp.moments
  from boot package.

- Corrected explicit calls of splineOrder and
  splineKnots from splines package.

- Corrected explicit call of date.ddmmmyy from
  survival package.

- Fixed rpart HTML S3 method to include tree.depth
  function  defined internally, as rpart package is not
  exporting it anymore.

- Fixed .HTML.file warning of no visible bindings
  in almost every function of the package.

- Fixed bug in HTML.data.frame outputing invalid
  code (missing opening <tr>) when row.names was
  set to FALSE. As patch submited by Michael Irskens and
  also reported by Rik Schoemaker.

- Fixed bug in HTML.matrix, opening of <tbody>
  wasn't being carried. Pending the fixing of
  excess of </tr>'s.

- Fixed miscelaneous bugs in CSS files.

# 2006-09-28 - Version 1.58

- Fixed bug in HTMLcore.R (unintended \ interpolation)

- Fixed bug in HTMLfi() call inside HTML.summary.lm,
  which made R CMD check fail on Windows.

- Uniformization of capitalization of HTML tags
  (to lowercase), in conformity with the
  XHTML 1.0 standard.

- Updated HTML.data.frame to include row.names
  option, as contributed by Tobias Verbeke on
  2006-05-27.


# 2006-07-04 - Version 1.57

- Added the HTML2clip wrapper, suggested by Gabor
  Gronthendieck.

- Miscelaneous fixes to documentation (contributed
  by Tobias Verbeke)

- Cleaning up of man directory of spurious files as
  suggested by Kurt Honik
2008-10-13 11:27:50 +00:00
markd
04205b1684 Update R-PHYLOGR to 1.0.6
Changes unknown
2008-10-13 11:24:40 +00:00
markd
be2f59c1db Update R-Matrix to 0.999375.15
lots of bug fixes and new functionality.
2008-10-13 11:22:46 +00:00
markd
986d7b3baa Update R-ISwR to 2.0.2
Changes unknown.
2008-10-13 11:19:45 +00:00
markd
5357f53a33 Update R-GRASS to 0.3.7
Changes unknown.
2008-10-13 11:17:04 +00:00
markd
37023d1687 Update R-DAAG to 0.97
Changes unknown
2008-10-13 11:14:55 +00:00
markd
d9764d87e0 Update R-CGIwithR to 0.72.
Changes unknown.
2008-10-13 11:12:52 +00:00
markd
71b28bb2f8 user-destdir support from Masao Uebayashi with minor changes from me.
also update R_HOMEPAGE_BASE
2008-10-13 11:08:31 +00:00
adam
5d55a849cc Changes 4.32:
The following new features were included in the MIP solver
*  MIP presolver
*  mixed cover cut generator
*  clique cut generator
*  Euclidean reduction of the objective value

Due to changes the routine glp_intopt may additionally return
GLP_ENOPFS, GLP_ENODFS, and GLP_EMIPGAP.

The API routines lpx_integer are lpx_intopt are deprecated,
since they are completely superseded by glp_intopt.

The following new branch-and-cut API routines were added:
glp_ios_row_attr      determine additional row attributes
glp_ios_pool_size     determine current size of the cut pool
glp_ios_add_row       add constraint to the cut pool
glp_ios_del_row       delete constraint from the cut pool
glp_ios_clear_pool    delete all constraints from the cut pool
2008-10-13 08:57:26 +00:00
uebayasi
34004f51e0 Move mk/emacs.mk to editors/emacs/modules.mk.
Don't call pkg_info to get the installed Emacs version; always use the
version matching EMACS_TYPE set by users.  Be DEPENDS to it.  This should
address pkg/37146 by Aleksey Cheusov.

While here convert some emacs lisp packages to user-destdir.
2008-10-11 09:31:54 +00:00
ahoka
0d5df9fd51 Changes since FFTW 3.1.2:
* Bug fix: FFTW computes incorrect results when the user plans both
  REDFT11 and RODFT11 transforms of certain sizes.  The bug is caused
  by incorrect sharing of twiddle-factor tables between the two
  transforms, and only occurs when both are used.  Thanks to Paul
  A. Valiant for the bug report.
2008-10-09 09:08:21 +00:00
joerg
3722c7f2b5 Catch up with PLIST changes. Bump revision. 2008-09-19 14:39:00 +00:00
bjs
3edf18d86b Pass pkgsrc ${CFLAGS} to the build via ${DEBUG}. 2008-09-17 15:23:19 +00:00
ahoka
18dbb96a00 Imported math/fricas. 2008-09-14 12:29:56 +00:00
ahoka
207dd9a17f Import fricas-1.0.3 as math/fricas.
Packaged by Aleksej Saushev with help from Yorick Hardy
in the pkgsrc-wip project.


FriCAS is a fork of Axiom.

FriCAS algebra library is written in a high level strongly typed
language (Spad), which allows natural expression of mathematical
algorithms.

FriCAS uses lightweight developement methodology.  Compared to Axiom
FriCAS is significantly restructured -- it is more portable and fixed
several defects.  FriCAS removed rather large unused parts (without
removing functionality).  It is expected that FriCAS will be much
easier to maintain than original Axiom.
2008-09-14 12:25:00 +00:00
jnemeth
356dcc588c sort 2008-09-11 21:27:08 +00:00