CXXFLAGS, and LDFLAGS by the buildlink.mk files so remove the extra
definitions to add them from the package Makefiles. As advised by the
bsd.buildlink.mk file, also ensure that the buildlink.mk files are
included prior to defining any package-specific CFLAGS/LDFLAGS to ensure
that the buildlink directories are at the head of the compiler search
paths.
Use BUILDLINK_INCDIR, BUILDLINK_LIBDIR for locations of linked headers
and libraries. Create a variable BUILDLINK_TARGETS whose value is the
list of build-link targets to execute.
* What is new in gsl-0.8:
** The build process now uses the latest libtool and automake
** The library should now compile with Microsoft Visual C++
** Portable versions of the isinf, isnan and finite functions are
available as gsl_isinf(x), gsl_isnan(x) and gsl_finite(x).
** The definitions of GSL_POSINF, GSL_NEGINF and GSL_NAN no longer
cause divisions by zero during compilation.
** The gsl_interp_obj has been renamed to gsl_interp
** The poly_eval and pow_int functions have been moved from the
specfunc directory to the poly and sys directories.
** The Chebyshev functions are now available as an independent module
in their own directory.
** The error handling conventions have been unified across the
library. This simplifies the use of the special functions.
** A full CBLAS implementation is now included for systems where ATLAS
has not been installed. The CBLAS library can also be used
independently of GSL. The organisation of the BLAS directories has been
simplified.
** IEEE support for HPUX-11, NetBSD, Apple Darwin and OS/2 are now
included.
** The library now includes implementations of log1p, expm1, hypot,
acosh, asinh, atanh for platforms which do not provide them.
** The convention for alloc and set functions has changed so that they
are orthogonal. After allocating an object it is now necessary to
initialize it.
** There is a new module for estimating numerical derivatives of functions
** There is a new module for handling data with ntuples
** The histogram lookup functions are now optimized for the case of
uniform bins, and include an inline binary search for speed.
** The Chebyschev coefficients for the QAWO algorithm are now
precomputed in a table for efficiency, rather than being computed on
the fly.
** There are several new sorting functions for selecting the k-th
smallest or largest elements of a dataset.
** Iterator functions are now available for permutations,
gsl_permutation_next and gsl_permutation_prev.
** The function gsl_complex_xy has been renamed gsl_complex_rect
** The API for simulated annealing has been changed to support search
spaces in which the points cannot be represented as contiguous-memory
data structures. gsl_siman_solve() now takes three extra arguments: a
copy constructor, a copy function and a destructor, allowing
gsl_siman_solve() to do its work with linked data structures. If all
three of these function pointers are NULL, then the traditioanl
approach of using malloc(), memcpy(), and free() with the element size
is used.
Fixed
1- return() could forget objects on heap [F2]
2- polhensellift(x^3+x^2+2,[x^2,x+1],2) --> pols not coprime [F3]
3- Configure missed some shared libraries [e.g RedHat 7.0] [F4]
4- requests for precision of bnfinit(x) [ = Q ] could yield SEGV [F6]
5- compatible = 3 not taken into account when reading a file [F7]
6- lines > 0: output driver didn't reset properly after user output [F9]
7- nfdisc(x^5+2*x^4+3*x^3-3*x^2+122*x-1) --> impossible inverse [F10]
8- bug in gcc-2.95: SEGV on Linux (quicksqri) [F11]
9- addrfrac: could return a t_RFRAC whose denominator wasn't a t_POL[F12]
10- bnfcertify (zimmertbound): off by two error when reading bound [F13]
BA 11- pbs in Fp_factor_irred (factoring over Fq a pol. defined over Fp)[F25]
12- typo in quadhilbertimag (SEGV for very large discriminants) [F28]
BA 13- isprime(n < 2, 2 or 3) gave wrong result [F31]
BA 14- nfgaloisconj(polcyclo(11)+1)--> oo loop [F35]
nfgaloisconj(polcyclo(40))-->incorrect result
IS 15- typo in squfof tuning on 64bit machines [F36]
16- van Hoeij's algorithm (factor(Z[X])): wrong bound in LLL_cmbf [F41]
17- rare SEGV in nfdisc [F44]
18- rare problem in isprincipal (large non Galois base field) [F56]
--> wrong result (generators not required) or infinite loop.
19- build failed with readline-4.2 [F57]
Changed
1- DOS distribution archives (GPM removed) [C1]
XR 2- try more prime ideals in nfsqff [nffactor, modular part] [C4]
3- renamed library function gsize() to sizedigit() [pb with gtk] [C10]
IK 4- let lisGEN() return NULL when EOF is met (was oo loop) [C12]
5- install the whole distribution (see ?12) + improved Configure [C17]
Added
1- README.WIN, config/[arch-osname|locatesymbol], doc/tex2mail.1 [A1]
This is an implementation of a VSIP Library (Vector/Signal/Image
Processing Library) as defined by the VSIPL Forum for a CORE profile.
The TASP_VSIPL library is an effort to produce a VSIPL library
suitable for demonstration and early development and testing of VSIPL
code and ideas.
The Tactical Advanced Signal Processing Common Operating Environment
(TASP COE) effort is striving to produce a common operating
environment for signal processing throughout the Navy and DOD for the
COTS environment. VSIPL is thought by TASP to have a good chance of
becoming a standard signal processing library for many vendors who
supply DOD high performance computing products. For this reason TASP
is supporting the VSIPL effort.
This is the TASP VSIPL Core Plus implementation of VSIPL. Core Plus
includes all the functionality of the core profile plus most floating
point Vector and Elementwise Operations not required by the VSIPL Core
profile. The additional functions include such things as matrix
elementwise add and multiply.
The TASP VSIPL code is required to be freely available for any
use.
* Install library as libpari.a. (Previously the package installed
libpari.a.2.1 and created a symbolic link libpari.a).
* Fix warning about O_RDONLY being redefined.
LINPACK is a collection of Fortran subroutines that analyze and solve
linear equations and linear least-squares probles. The package solves
linear systems whose matrices are general, banded, symmetric
indefinite, symmetric positive definite, triangular, and tridiagonal
square. In addition, the package computes the QR and singular value
decompositions of rectangular matrices and applies them to
least-squares problems. LINPACK uses column-oriented algorithms to
increase efficiency by preserving locality of reference.
LINPACK was designed for supercomputers in use in the 1970s and early
1980s. LINPACK has been largely superceded by LAPACK which has been
designed to run efficiently on shared-memory, vector supercomputers.
BUG FIXES
- t-functions using ellipsis argument (...) crashed Tela (this was due to the
"deep" copy object array feature introduced in previous version 1.31, cure
was to introduce another internal type KShallowObjectArray which is now used
in Tprg::execute() in prg.C)
- memory leak in object arrays (object.C:Tobject::setsize, deep clear was missing)
(also this bug existed only in version 1.31, not before, because object array
semantics was changed from shallow copy to deep copy in 1.31).
USER-VISIBLE CHANGES
- new diag() function contributed by Ch.Spiel which allows a second input argument
specifying the super- or sub-diagonal (the default zero meaning the main diagonal),
this function is compatible with Matlab's and also compatible with the old diag()
function (std.ct)
- added global symbol NaN if compiler supports NaN's (ieee754.h header is present and working) (tela.C)
and cause problems if left.
Touch "parse.cc" and "parse.h" so that they won't get remade. (The configure
script doesn't detect bison correctly anyway).
Remove a duplicate entry from PLIST.
Make it work with the readline currently in pkgsrc.
2001-04-19 John W. Eaton <jwe@bevo.che.wisc.edu>
* octMakefile.in (CONF_DISTFILES): Remove config.h.bot from the list.
2001-04-19 David Livings <david.livings@asa.co.uk>
* Makeconf.in (mk-libdir-link): Omit check for $(octlibdir)/octave
existing as a directory.
2001-02-28 Albert Chin-A-Young <china@thewrittenword.com>
* configure.in: Check for getpwnam in libsun only after checking
default libraries first. Check for gethostname in libsocket only
after checking default libraries first.
2001-02-22 John W. Eaton <jwe@bevo.che.wisc.edu>
* configure.in: Allow for using f2c when setting functions to look
for in the BLAS and Lapack libraries.
From Kurt Hornik <Kurt.Hornik@ci.tuwien.ac.at>.
2001-02-10 Mumit Khan <khan@nanotech.wisc.edu>
* test/octave.test/string/dec2hex-1.m: Don't assume hex format
produces lower case letters.
2001-02-07 John W. Eaton <jwe@bevo.che.wisc.edu>
* acconfig.h: Merge contents of config.h.bot.
* config.h.bot: Delete.
* autogen.sh: Allow running of autoconf or autoheader to be skipped.
2001-02-06 John W. Eaton <jwe@bevo.che.wisc.edu>
* readline: Update to new version (4.2-beta1).
2001-02-05 Mumit Khan <khan@nanotech.wisc.edu>
* configure.in (TEMPLATE_AR, TEMPLATE_ARFLAGS): New variables.
* Makeconf.in (TEMPLATE_AR, TEMPLATE_ARFLAGS): Likewise.
* configure.in (XTRA_CXXFLAGS): Use -fno-implicit templates for
pre-gcc3 compilers. Remove -fno-rtti and -fno-exceptions.
(DEPEND_FLAGS, DEPEND_EXTRA_SED_PATTERN): New macros.
(BLAS_LIBS): Fix test for sunperf library on Sun Solaris.
(CPICFLAG, CXXPICFLAG, FPICFLAG, SH_LDFLAGS, RLD_FLAG): Add Sun
compiler support.
* Makefile.in (DEPEND_FLAGS, DEPEND_EXTRA_SED_PATTERN): New
variables.
(%.d : %.cc): Use.
(%.d : %.c): Likewise.
* acconfig.h (CXX_ISO_COMPLIANT_LIBRARY): Add #undef.
2001-01-31 Mumit Khan <khan@nanotech.wisc.edu>
* Makeconf.in (%.d : %.cc): Strip the directory portion of the
target.
(%.d : %.c): Likewise.
* aclocal.m4 (OCTAVE_CXX_ISO_COMPLIANT_LIBRARY): New macro.
* configure.in: Use it.
2001-01-29 John W. Eaton <jwe@bevo.che.wisc.edu>
* Makeconf.in (do-subst-config-vals): Substitute
OCTAVE_CONF_CANONICAL_HOST_TYPE here too.
* octave-bug.in: Substitute OCTAVE_CONF_CANONICAL_HOST_TYPE, not
OCTAVE_CANONICAL_HOST_TYPE.
This library contains routines to compute cumulative distribution
functions, inverses, and parameters of the distribution for the
following set of statistical distributions:
(1) Beta
(2) Binomial
(3) Chi-square
(4) Noncentral Chi-square
(5) F
(6) Noncentral F
(7) Gamma
(8) Negative Binomial
(9) Normal
(10) Poisson
(11) Student's t
(12) Noncentral t
Given values of all but one parameter of a distribution, the other is
computed. These calculations are done with FORTRAN Double Precision
variables.
Thanks to the scilab folks at INRIA for helping us get rid of 9 more patches!
From the CHANGES file:
Main Changes Scilab 2.5 -> 2.6
==============================
NEW FUNCTIONALITIES
===================
Automatic graphic rescaling when combining 2D plots, axis handling
Isometric 3D plots. Thanks to Enrico Segre
3D plots shading. Thanks to Stephane MOTTELET
Error messages handling
Grep function added
Modeless message box added
Profiling of functions execution added
Real time simulation in Scicos. Thanks to Anders Blomdell
Scicos diagram linearization and fixed point computation
OTHERS IMPROVEMENTS
===================
A more professional licence
Input/Output improved (carriage return at the end of the file are not
required anymore, OS independent ascii file input, handling of opened
files )
More complete mexlib for MatlabV mex interface.
Many bug corrected in integer types manipulation
API improved, many examples given
A better window management under KDE
A better plugin interface (help, demos,...) and new Scilab functions for
building and loading interfaces.
Interactive demos for ODE and DAE solving added
Scicos' GUI improved, customizable keyboard shortcuts added
Default list, tlist and mlist display can be overloaded
It is now possible to draw dashed lines in color. Background now work
with postscript driver. Easiest argument passing to plot2d, plot3d,...
GIF driver bugs fixed.
INCOMPATIBLITY
==============
help and scicos palettes handling have changed.
Fraclab toolbox has been moved to the contributions part and is no
more included in the package
The Communication Toolbox (geci) is now obsolete. It will be removed in
next release. Use PVM instead.
2.1.5 --> 2.2
-------------
Bug fixes:
- The sign convention for rotation angles was not correctly applied
in Scientific.Geometry.Transformation and Scientific.Geometry.Quaternions.
Everything was consistent, but with the wrong sign.
Improvements:
- Scientific.IO.PDB can handle a larger range of variant formats for DNA
New features:
- New module Scientific.Visualization.VPython.
- Scientific.IO.TextFile also handles bzip2 compressed files
(extension .bz2). This only works if bzip2 is installed.
2.1.4 --> 2.1.5
---------------
New features:
- Scientific.TkWidgets.TkPlotCanvas:
- Popup menu on right button
- Value display on middle button
- HorizontalLine, VerticalLine objects
Modifications:
- MPI interface no longer assumes that MPI_Op and MPI_Datatype are
integers (they aren't in LAM, for example).
2.1.3 --> 2.1.4
---------------
New features:
- New MPI functions implemented by Jakob Schiotz:
- nonblocking send and receive
- abort
- reduce and allreduce
Modifications:
- The Python interpreter lock is released during calls to the netCDF
library, permitting other threads to continue during I/O operations.
An internal lock has been added to prevent reentrant calls to the
netCDF library, which is not thread safe.
(If you don't understand any of this, you shouldn't care, it has
no consequences unless you use threads.)
- Methods receive and receiveString on MPI communicator objects
can be called without source and tag arguments (defaults to None).
Bug fixes:
- The compilation script did not work correctly for MPI support
2.1.2 --> 2.1.3
---------------
New features:
- Some small utility widgets have been added to Scientific.TkWidgets.
They are not particularly "scientific", but not worth the effort
of a separate distribution.
Bug fixes:
- The abs() function didn't work on DerivVar objects (modules
Scientific.Functions.Derivatives and Scientific.Functions.FirstDerivatives)
with negative values.
- The method projectionOf in Scientific.Geometry.Objects3D.Plane was
wrong.
2.1.1 --> 2.1.2
---------------
Installation:
- The mpipython executable is compiled using 'mpicc', which should simplify
installation significantly because all library specifications are
automatically taken into account. In other words, MPI support should
work on all platforms without any modifications to the Setup file.
(Thanks to Jakob Schiotz for this suggestion!)
- Some 'extern' declarations were changed to 'staticforward' to please
some compilers.
Documentation:
- the documentation for the methods receive and receiveString were
wrong.
2.1.0 --> 2.1.1
---------------
Bug fixes:
- The upper bound for MPI message tags was not treated correctly,
leading to a bound of zero on some platforms.
Modifications:
- The methods sendArray and sendString were combined into a single
method send.
- broadcastArray was renamed to broadcast, shareArray was renamed to share,
receiveArray was renamed to receive. The only function that retains
a data type indication is receiveString.
2.0.1 --> 2.1.0
---------------
Additions:
- MPI interface in Scientific.MPI
* What is new in gsl-0.7:
** Linux/PowerPC should now be well supported.
** Header files for common physical constants have been added.
** Functions linear and nonlinear regression in one or more dimensions
are now available.
** Vector and matrix views now have access to the address of the
underlying block for compatibility with VSIPL (www.vsipl.org).
** There is a new library for generating low-discrepancy quasi-random
sequences.
** The seeding procedure of the default random number generator
MT19937 has been updated to match the 10/99 release of the original
code. This fixes a weakness which occurred for seeds which were
powers of 2.
** The blas library libgslblasnative has been renamed libgslblas to avoid
confusion with system blas library
o add @exec/@unexecinstall-info directives to PLIST
o slightly change the path's for the documentation
(share/doc/octave instead of share/octave/doc etc.)
o install html docs into share/doc/html/octave
first component is now a package name+version/pattern, no more
executable/patchname/whatnot.
While there, introduce BUILD_USES_MSGFMT as shorthand to pull in
devel/gettext unless /usr/bin/msgfmt exists (i.e. on post-1.5 -current).
Patch by Alistair Crooks <agc@netbsd.org>
