Commit graph

2427 commits

Author SHA1 Message Date
sno
8ccda1103d PkgSrc changes:
- Updating package for p5 module Math::BigInt::GMP from 1.23 to 1.24
  - Setting license to gnu-gpl-v2

Upstream changes:
2007-07-31 v1.24 Tels 5530 tests
  * apply patch for warnings about ptr size mismatch under Cygwin (thanx Reini Urban!)
  * make it work under 5.6.x again by defining SvUOK() (Thanx Marcus Holland-Moritz
    and Reini Urban!)
2009-05-03 18:07:08 +00:00
zafer
5fb3c994c5 remove dead mirrors. update existing. 2009-04-30 20:50:43 +00:00
asau
e30f319b03 Update to FriCAS 1.0.6
Notable changes (compared to 1.0.5 version) include:

- the axiom script is no longer installed (use fricas script instead)
- some undesirable simplification are no longer done by default,
  for example now asin(sin(3)) is left unevaluated
- support lambda expressions using '+->' syntax and nested functions
  in Spad
- better configure, support for Dragonfly BSD
- faster bootstrap, also parallel (this does not affect speed
  of release build)

Several bug fixes, in particular:

- fixed a regression introduced in 1.0.4 which caused equality
  for nested products to sometimes give wrong result
- corrected fixed output of floating point numbers,
- operations on differential operators like symmetric power work now
- fixed crashes related to coercing power series
- functions returning Void can be traced
2009-04-30 19:55:47 +00:00
asau
3fc0c9473c Update to Maxima 5.18.1
Backwards-incompatible changes:

 * cut out broken code intended to support xgraph


   New items in core:

 * function bfallroots to compute polynomial roots with bigfloats
 * general scheme for integrals of special functions
 * exponential integrals
 * incomplete beta function
 * Fresnel integrals
 * Lambert W function


   New items in share:

 * package minpack
 * package colnew
 * package z_transform
 * package finance


   Other revisions:

 * additional special cases of integrals of power functions
 * bigfloat arithmetic
 * special functions (beta, gamma, error, Bessel, elliptic and inverse
   elliptic, hypergeometric, Laplace functions and friends)
 * new version of Imaxima user interface
 * recognize integers in base greater than 10
 * tex function can assign user function as TeX property
 * revision and translation of message strings (incomplete)
 * documentation revisions throughout
 * patches for Clozure CL throughout
 * build Maxima with ECL via build system used for other Lisps
 * minor code clean-up throughout
 * other improvements and bug fixes
2009-04-29 18:26:50 +00:00
schmonz
f83dd13d31 Add and enable p5-Math-{Round,VecStat}. 2009-04-21 17:48:22 +00:00
schmonz
5108777008 Initial import of math/p5-Math-VecStat, needed by upcoming graphics/circos.
Some basic statistics on vectors (min,max,average,....).
2009-04-21 17:47:10 +00:00
schmonz
fb20589fb4 Initial import of math/p5-Math-Round, needed by upcoming graphics/circos.
Math::Round is a Perl module.  It supplies functions to round numbers,
both positive and negative, in various ways.  This may seem like an
odd thing to write a whole module for, but rounding can sometimes be
a little tricky, so I thought some people might find this useful.
2009-04-21 17:46:39 +00:00
asau
fed01e4731 Don't depend on Fortran.
CLISP and SBCL are build dependencies.
2009-04-18 11:17:33 +00:00
drochner
87cc21a213 update to 5.26.1
changes:
-bugfixes
-translation updates
2009-04-17 17:30:02 +00:00
adam
6413d6c4b5 Changes 3.0.5:
* Fixed a serious file reading bug.

Changes 3.0.4:
* Bug-fixing release.
2009-04-12 20:46:20 +00:00
asau
61c53c1e12 Update to OpenAxiom 1.2.1.
This is a minor bug fix and cleanup release.

pkgsrc changes: don't require gawk, add Dragonfly support.
2009-04-10 05:21:59 +00:00
drochner
ecc9ad04ec update to 1.0.6
changes:
-Try the slopefield / vectorfield plots
-bugfixes
-drop dependency on libgnome
2009-04-08 18:22:54 +00:00
minskim
280dcea0bc Update mathomatic to 14.3.6.
Changes since 14.2.7:
12/23/08 - Simplified makefile.
12/26/08 - Fixed rules for simplifying "(x^n)^m" so "misc/john.in" and
           others simplify better.  Works similar to Maxima now.
12/27/08 - Numeric GCD now properly returns the other parameter, if
           either parameter is 0.  Renamed "misc/polyroots.c" to
           "misc/roots.c" and simplified this example code.
12/30/08 - Added "update" script, which updates the function
	   prototypes in "cproto.h".
1/1/09 - Optionally factor out the gcd of integer coefficients when
         improving readability, for example: 6x+4y becomes 2*((3*x) +
         (2*y)).  This is now the default.
1/13/09 - Added descriptions of all interesting math scripts in
	  "tests/README.txt".
1/16/09 - Allow nintegrate and "integrate definite" commands in the
          symbolic math library; the bounds are specified in the two
          equation spaces following the current equation.
1/18/09 - Made expression and equation entry always consecutively
          numbered equation spaces, unless memory is exhausted.
1/19/09 - Made consistent list command output with only one newline
	  after each equation space.
1/21/09 - Fixed erroneous doubling of parentheses display when solving
	  and showing steps with "set debug 2".
1/22/09 - Added -b option, to conveniently set bold color mode from
	  the command line.
1/25/09 - Improved looks of eliminate command by not solving if
	  equation is already solved.
2/3/09 - Table of contents was added to the Mathomatic User's Manual.
2/5/09 - Added display of any numerical fractions when calculating or
         using calculate command; for example, entering "1/2+3/8" now
         results in "answer = 0.875 = 7/8".
2/6/09 - Removed erroneous lsqrt() routine obtained from Wikipedia, so
         that matho-sumsq works properly now.
2/7/09 - Disable pause command when appropriate (when input not a tty
         and for symbolic math library).
2/8/09 - Polished up educational example scripts in "tests" directory.
2/11/09 - Entry of a function now results in "Named functions
	  currently not implemented" error message.
2/12/09 - Bugfix to matho-primes and added "misc/limits.c".
2/15/09 - The fraction command was fixed to give better results.  "set
          display2d" flag now no longer affects any results at all, it
          only affects 2D output mode.
2/17/09 - Renamed -h (HTML) option to -x, -h is now the help option.
          Added -w option to set wide output mode.
3/9/09 - Found the correct formulas for solving the general cubic
         equation on Wikipedia, so "tests/cubic.in" always gives
         correct answers now.
3/12/09 - Tweak made to simplify result beautifier: factoring priority
          only given to real variables now, special constant variables
          pi#, e#, and i# have no effect and behave like any constant
          now.
3/15/09 - Corrected and improved parse_complex() C function for more
          complex number functionality and a bug fix.
3/18/09 - Added "set negate_highest_precedence" option, which allows
          the negate operator to be the lower precedence of times and
          divide, like it is in Maxima and most other math programs.
3/24/09 - Made "set no autosolve" mode more useful by making it solve
          if a solve variable is entered with an equals sign.  This
          allows easy entry of both single variable expressions (with
          no =) and solve variables (with =) while in this mode.
3/27/09 - Selecting equations by entering the equation number was
          returning with error if the equation space was empty.
          Fixed, you can now select any previously allocated equation
          space.
2009-04-07 17:30:25 +00:00
chuck
e3433706a2 Added math/p5-Statistics-Descriptive version 2.6 2009-04-06 19:02:32 +00:00
chuck
25f239a6c4 Statistics::Descriptive is a perl module of basic descriptive statistical
functions (mean, median, mode, sum, variance, standard_deviation, etc.)
2009-04-06 18:56:46 +00:00
markd
acbb2b206d Update eigen2 to 2.0.0
Release version.  Cleans up alignment issues.
2009-04-06 12:37:49 +00:00
wiz
b1076bb765 Remove msgfmtstrip scripts and targets using them, now that the
infrastructure supports this properly (thanks joerg!).
2009-03-22 19:01:37 +00:00
joerg
2d1ba244e9 Simply and speed up buildlink3.mk files and processing.
This changes the buildlink3.mk files to use an include guard for the
recursive include. The use of BUILDLINK_DEPTH, BUILDLINK_DEPENDS,
BUILDLINK_PACKAGES and BUILDLINK_ORDER is handled by a single new
variable BUILDLINK_TREE. Each buildlink3.mk file adds a pair of
enter/exit marker, which can be used to reconstruct the tree and
to determine first level includes. Avoiding := for large variables
(BUILDLINK_ORDER) speeds up parse time as += has linear complexity.
The include guard reduces system time by avoiding reading files over and
over again. For complex packages this reduces both %user and %sys time to
half of the former time.
2009-03-20 19:23:50 +00:00
joerg
0d0e90a320 Include pyversion.mk include the protected part of the buildlink3.mk
files, not over and over again.
2009-03-20 17:30:09 +00:00
drochner
2a1819ff4d update to 2.4.1
changes:
-Behavior of mpfr_check_range changed
-Function mpfr_init_gmp_rand is no longer defined
-New functions
-Configure test for TLS support
-Get default $CC and $CFLAGS from gmp.h
-Security fix in mpfr_snprintf and mpfr_vsnprintf (buffer overflow)
-Configure: new checks for length modifiers hh and ll (new in C99)
-bugfixes
-documentation fixes
2009-03-19 11:54:53 +00:00
jmcneill
e7226224eb Update gcalctool to 5.26.0.
Overview of changes in gcalctool 5.26.0

    * Fix button expansion (nowak2000, Bug #575385)

    * Removed deprecated test/ directory (Bug #574048)

    * Updated documentation: C (Robin Sonefors), ca (Joan Duran)

    * Updated translations: as (Amitakhya Phukan), da (Ask H. Larsen),
                            el (Jennie Petoumenou), es (Jorge Gonzalez),
                            fi (Tommi Vainikainen), gl (Ignacio Casal Quinteiro),
                            gu (Ankitkumar Patel), hi (Rajesh Ranjan),
                            hu (Gabor Kelemen), it (Sergio Durzu),
                            lt (Vytautas Rėkus), mai (Rajesh Ranjan),
                            ml (Ani Peter), mr (Sandeep Shedmake),
                            nb (Kjartan Maraas), nl (Tino Meinen),
                            pl (Wadim Dziedzic), ru (Nickolay V. Shmyrev),
                            ta (felix), te (Krishnababu K),
                            zh_HK (Chao-Hsiung Liao), zh_TW (Chao-Hsiung Liao)

Overview of changes in gcalctool 5.25.92

    * Restore number display mode (FIX/SCI/ENG) on startup (Robert Ancell, Bug #572881)

    * Fix rounding errors in integer power calulations (Robert Ancell, Bug #527540)

    * Fix error in cosine/tangent calculations (Robert Ancell, Bug #571007)

    * Updated documentation: eu (Inaki Larranaga Murgoitio)

    * Updated translations: en_GB (Philip Withnall), fi (Ilkka Tuohela),
                            fr (Bruno Brouard, Claude Paroz), ja (Takeshi AIHANA)
                            kn (Shankar Prasad), lv (Raivis Dejus),
                            nl (Wouter Bolsterlee), pt (Duarte Loreto)
                            pt_BR (Og Maciel, Rodrigo Flores), sv (Daniel Nylander)

Overview of changes in gcalctool 5.25.91

    * Initialise GType system so usage of GConf doesn't cause crashes (Matthias Clasen, Bug #571581)

    * Rework command-line arguments to be standard (Robert Ancell, Bug #569885)

    * Correctly handle decimal points for languages not using '.' (Robert Ancell, Bug #566929)

    * Fix shortcut keys so standard menu keys work (Robert Ancell)

    * Updated documentation: eu (Inaki Larranaga Murgoitio)

    * Updated translations: ast (Mikel González), cs (Petr Pulc), da (Ask H. Larsen), eu (Inaki Larranaga Murgoitio),
                            gu (Sweta Kothari), hu (Gabor Kelemen), ro (Adi Roiban), vi (Clytie Siddall),
                            zh_HK (Chao-Hsiung Liao), zh_TW (Chao-Hsiung Liao)

Overview of changes in gcalctool 5.25.90

    * Fixed incorrect bit shift operation (Robert Ancell, Bug #569176)

    * Updated documentation: sv (Daniel Nylander)

    * Updated translations: ca (Joan Duran), de (Christian Kirbach), ko (Changwoo Ryu), or (Manoj Kumar Giri)

Overview of changes in gcalctool 5.25.5

    * Updated documentation: de (Christian Kirbach)

    * Updated translations: nb (Kjartan Maraas), th (Theppitak Karoonboonyanan)

Overview of changes in gcalctool 5.25.4

    * Updated translations: de (ckirbach), es (Jorge Gonzalez), zh_CN (甘露)

Overview of changes in gcalctool 5.25.3

    * Made exponential numbers work without a sign, e.g. '1e2' works
      the same as '1e+2' (Robert Ancell).

    * Correctly calculate exponential numbers in binary mode and
      convert correctly when changing bases (Robert Ancell, Bug #516159).

    * Fix broken accelerator keys from changes in 5.25.2 (Robert Ancell, Bug #379476).

Overview of changes in gcalctool 5.25.2

    * Changed the scientific UI so that inverse operations (e.g. Ln/e^x) are controlled by the shift key.
      The following shortcut keys have changed:

      Function     | Old | New
      --------------------------
      Sine         | K   | k
      Inv. Sine    | -   | K
      Cosine       | J   | j
      Inv. Cosine  | -   | J
      Tangent      | L   | w
      Inv. Tangent | -   | W
      Natural Log  | N   | n
      e^x          | {   | N
      Log          | G   | g
      10^x         | }   | G
      Log_2        | H   | h
      2^x          | -   | H
      x^y          | ^   | ^ or o
      x^(1/y)      | -   | O

      (Robin Sonefors, Bug #379476).

    * Fixed crash where financial dialogs are activated from other modes on startup
      (Robin Sonefors, Bug #560196).

    * Give binary invert operation higher precedence so that ~X and X == 0 (Sami Pietilä, Bug #562251)

    * Fixed calculation errors for boolean operations on very large numbers (Robert Ancell, Bug #509988)

    * Always read configuration from /apps/gcalctool not /apps/(appname) as the application
      name is different when symlinked (e.g. the gnome-calculator symlink) (Matt Keenan, Bug #559260).

    * Correct gconf key names in man page (Robert Ancell, Bug #559458).

    * Updated translations: es (Jorge Gonzalez)

    * Updated help: es (Jorge Gonzalez)

Overview of changes in gcalctool 5.25.1

    * Added a programming mode that contains the bit editor (Robin Sonefors, Bug #501508).

    * Made finacial operations GUI-based not register based (Robin Sonefors, Bug #318686).

    * Added Gross Profit Margin Ration Financial Function (Robin Sonefors, Bug #150663).

    * Don't clear display when changing modes and allow all functions to work in all non-basic
      modes (Robert Ancell, Bug #554133).

    * Set decimal point label to be based on LC_NUMERIC as users can set their numerical
      representation to different to their language settings (Robin Sonefors, Bug #557331).

    * More refactoring in MP math library (Klaus Niederkrueger, Robert Ancell, Bug #524091).

    * Fixed GtkSpinButton warning (Robin Sonefors, Bug #553965).

    * Only update bit panel when display contains a solved number (Robert Ancell, Bug #548690).

    * Remove inline declaration so can compile in C89 (Jens Granseuer, Bug #553307).

    * Open help with gtk_show_uri() (Thomas Andersen, Bug #556207).

    * Added translator comments (Robert Ancell)

    * Updated translations: bg (Alexander Shopov),
                            da (Ask H. Larsen, Kenneth Nielsen),
                            es (Jorge Gonzalez),
                            et (Ivar Smolin),
                            fi (Ilkka Tuohela),
                            mk (Jovan Naumovski),
                            pt_BR (Vladimir Melo, Leonardo Ferreira Fontenelle)

    * Updated help: es (Jorge Gonzalez)
2009-03-18 00:32:45 +00:00
darcy
57ded33aec Correct email address for generic MAINTAINER. 2009-03-17 21:40:44 +00:00
jnemeth
fe84b0509e sort 2009-03-12 22:31:41 +00:00
hasso
031b1d515e Make it compile on DragonFly. 2009-03-11 12:42:41 +00:00
asau
afe9d70942 Recognize Dragofly as BSD Family representative.
Enables Dragonfly build (tested on 2.1.1).
2009-03-08 17:17:02 +00:00
wiz
78b7af7df5 Use mk/omf-scrollkeeper.mk instead of textproc/rarian/omf.mk. 2009-03-08 15:56:43 +00:00
hubertf
2b6267313d add & enable p5-Math-BigInt-GMP 2009-03-07 02:20:35 +00:00
hubertf
43a207a6ea Add math/p5-Math-BigInt-GMP-1.23:
a libgmp-accelerated class for BigInt - needed to speed (and shut!)
up p5-Net-SSH (on NetBSD...)
2009-03-07 02:19:33 +00:00
seb
6dff84c342 Fix shared library loading on Darwin.
Bump PKGREVISION to 1.
2009-03-05 23:12:51 +00:00
joerg
25a80fb4ab Remove PYBINMODULE. All it did was mark some packages as not available
on some platforms that lacked shared library support in the past. The
list hasn't been maintained at all and the gain is very limited, so just
get rid of it.
2009-03-05 18:51:26 +00:00
drochner
30c060b906 update to 1.3.4
changes:
-bugfixes
-makes the formula entry more locales robust
2009-02-25 19:50:19 +00:00
minskim
91948cae88 Let pari depend on dvipsk because teTeX-bin no longer provides dvips. 2009-02-25 03:33:03 +00:00
asau
ab865e7de4 Fix DISTNAME so that it doesn't follow PKGREVISION changes.
Unbreaks fetch.
2009-02-25 01:49:48 +00:00
joerg
793ee13151 DESTDIR support 2009-02-23 18:14:20 +00:00
wiz
0ec0435b7e Update to 0.71:
0.68  Fri Jun 30 12:17:01 2006
	- Added a new version of phrtsd and the phrtsd_orig option.

0.69  Tue Sep 12 08:55:10 2006
	- Changed pow to exp at randlib.c[1040] to get around a bug
	  with gcc under AIX. (Would it also be possible to avoid
	  this by using -lmsaa rather than -lm?)

0.70  Fri Oct 12 16:30:18 2007
	- Minor corrections to POD.

0.71  Tue Sep 16 15:38:06 2008
	- Used $ARGV[0] rather than shift in Makefile.PL.  Thanks to John
	  Fong for the correction.
2009-02-22 16:21:11 +00:00
asau
316a689776 Use MASTER_SITE_NETLIB for Netlib and its mirrors.
Discussed with Tobias Nygren.
2009-02-22 14:15:28 +00:00
he
5d4962a7cc Update from version 1.22 to 1.23.
Pkgsrc changes:
 o Adapt to .zip distfile format
 o Add HOMEPAGE

Upstream changes:

1.23  18 Dec 2008, Perl 21th birthday version
        Minimum Perl version required in META.yml
2009-02-22 13:21:32 +00:00
he
1e79a72421 Update from version 2.010800nb1 to 2.010801.
Pkgsrc changes:
 o Re-do patch-ab so that the tests and adaptations for the various
   NetBSD archs don't sit inside "if ($os eq 'sunos')" (!).

Upstream changes:

2.010801:
  build_paricfg() takes a version argument
  write_paricfg(): likewise.
  Emit paricfg.h which supports GP/PARI v2.3.4.
  Remove the section on CPAN mirroring from README.
  INSTALL: Explain how to google when server is down.
  Skip another subtest in ploth.t.
  Fix treatment of -oo in tests.  Still fails, but now with
     not ok 12 # in='intmellininvshort(2,4,$tab)-$A'
     #    out='-3.364954880E-97+9.90717831E-100*I', type='Math::Pari'
     # pari==='-3.072350108 E-97 + 9.90717831 E-100*I'
     # re_out='\-3\.072350108,?\s*E\-97,?\s*\+,?\s*9\.90717831,?\s*E\-100\*I'
  Consider `intfuncinit' as requiring "unsane" precision of limits
	(bug in GP/PARI???).  Now all tests pass???
2009-02-22 13:11:39 +00:00
wiz
18decf1db4 PKGREVISION bump for libsndfile ABI depends bump. 2009-02-21 13:22:43 +00:00
asau
0c97c611db CLISP isn't needed at run time, it is required for build time only.
Bump PKGREVISION.
2009-02-19 20:31:44 +00:00
adam
d14975a27c Changes 3.2.1:
* Performance improvements for some multidimensional r2c/c2r transforms;
  thanks to Eugene Miloslavsky for his benchmark reports.
* Compile with icc on MacOS X, use better icc compiler flags.
* Compilation fixes for systems where snprintf is defined as a macro;
  thanks to Marcus Mae for the bug report.
* Fortran documentation now recommends not using dfftw_execute,
  because of reports of problems with various Fortran compilers;
  it is better to use dfftw_execute_dft etcetera.
* Some documentation clarifications, e.g. of fact that --enable-openmp
  and --enable-threads are mutually exclusive (thanks to Long To),
  and document slightly odd behavior of plan_guru_r2r in Fortran.
* FAQ was accidentally omitted from 3.2 tarball.
* Remove some extraneous (harmless) files accidentally included in
  a subdirectory of the 3.2 tarball.
2009-02-17 10:40:47 +00:00
joerg
29e895b157 Python 2.3 doesn't work, so remove it. 2009-02-11 22:50:09 +00:00
joerg
0a3668f28c Doesn't support Python 2.3. 2009-02-11 22:47:05 +00:00
joerg
be089192f3 Sort PYTHON_VERSIONS_ACCEPTED. 2009-02-11 14:23:31 +00:00
obache
c0406efce7 pkgsrc-user@ => pkgsrc-users@. 2009-02-11 11:41:53 +00:00
joerg
3c645bb7fc Switch to Python 2.5 as default. Bump revision of all packages that have
changed runtime dependencies now.
2009-02-09 22:56:21 +00:00
dsainty
ea4dda00f1 Add p5-Roman 2009-02-09 03:20:03 +00:00
dsainty
5dac79d3a4 This module provides some functions which help conversion of numeric notation
between Roman and Arabic.
2009-02-09 03:18:07 +00:00
drochner
81570034e8 update to 5.24.3.1
This fixes an embarrassing bug in bitshift calculations.
2009-02-05 21:40:36 +00:00
seb
fd015d9805 Add & enable p5-Spreadsheet-Read 2009-02-01 16:54:35 +00:00
seb
2a6e9ec587 Initial import of p5-Spreadsheet-Read version 0.34 in the NetBSD
Packages Collection.

The Perl 5 module Spreadsheet::Read tries to transparently read
*any* spreadsheet and return its content in a universal manner
independent of the parsing module that does the actual spreadsheet
scanning.
2009-02-01 16:53:27 +00:00
seb
63a2a90053 Add & enable p5-Spreadsheet-XLSX 2009-02-01 15:25:49 +00:00
seb
3a3373313f Initial import of p5-Spreadsheet-XLSX version 0.09 in the NetBSD
Packages Collection.

The Perl 5 module Spreadsheet::XLSX is a (quick and dirty) emulation
of Spreadsheet::ParseExcel for Excel 2007 (.xlsx) file format. It
supports styles and many of Excel's quirks, but not all. It populates
the classes from Spreadsheet::ParseExcel for interoperability;
including Workbook, Worksheet, and Cell.
2009-02-01 15:25:02 +00:00
seb
fcf2590154 Add & enable p5-Spreadsheet-ReadSXC 2009-02-01 09:04:54 +00:00
seb
773980d78f Initial import of p5-Spreadsheet-ReadSXC version 0.20 in the NetBSD
Packages Collection.

The Perl 5 module Spreadsheet::ReadSXC extracts data from OpenOffice
1.x spreadsheet files (.sxc).
2009-02-01 09:04:02 +00:00
seb
5d2fb2d753 Update from version 0.4400 to version 0.4900 (upstream 0.49)
Upstream changes (it says 0.48 for the first changes entry but I guess the
author  really meant 0.49):
0.48 24 January 2009

    ! Added Text::CSV_XS to xls2csv() function to handle embedded commas
      in csv data. Reported by Fredrik Linde.
      https://rt.cpan.org/Ticket/Display.html?id=41337

    + Rewrote Utility.pm documentation.

    - Removed wantarray from ExcelFmt() and the unused and undocumented
      feature of returning the result and a format color in a list context.
      The older mechanism is still available but now requires an explicit flag.

0.48 23 January 2009

    ! Fixed bug where numbers with uppercase formats such as MM/DD/YY
      were ignored. Applies to files created by OpenOffice.org and
      some international versions of Excel. Added tests for above.
      http://rt.cpan.org/Public/Bug/Display.html?id=20526
      http://rt.cpan.org/Public/Bug/Display.html?id=31206
      http://rt.cpan.org/Public/Bug/Display.html?id=40307

    ! Removed undocumented and counter-intuitive use of overload on SheetNo in
      Worksheet.pm.
      http://rt.cpan.org/Public/Bug/Display.html?id=14278

0.47 22 January 2009

    ! Fixed bug where multiple embedded charts on a worksheet caused the
      worksheet order to be lost and data to get overwritten.
      Reported by Steven Martin and others.
      http://rt.cpan.org/Public/Bug/Display.html?id=13365

0.46 18 January 2009

    ! Heavily refactored the ExcelFmt() function for maintainability and
      fixed several bugs, in particular for 12 hour clock times.
      Added test cases for above.

    ! Removed use of $& match variables from ExcelFmt.
      Reported by Aaron Wigley.
      http://rt.cpan.org/Public/Bug/Display.html?id=42425

    ! Replaced lvalue substr() in ExcelFmt () with 4-arg substr()
      for efficiency. Reported by Goro Fuji.
      http://rt.cpan.org/Public/Bug/Display.html?id=42518

    ! Removed spurious t/examples dir from Makefile.PL and removed
      unused t/lib dir. Reported by Peter (Stig) Edwards.
      http://rt.cpan.org/Public/Bug/Display.html?id=42442

0.45 13 January 2009

    ! Fixed failed parsing of large (8-16k) Unicode strings.
      Reported by Graham Stead and Moka.
      http://rt.cpan.org/Public/Bug/Display.html?id=41813
      http://rt.cpan.org/Public/Bug/Display.html?id=35678

    ! Fixed critical bug where data rows could be ignored.
      Reported and isolated by Peter (Stig) Edwards.
      http://rt.cpan.org/Public/Bug/Display.html?id=30677
2009-01-31 16:16:05 +00:00
asau
da45eeb096 Update to FriCAS 1.0.5, change default Lisp to CLISP.
Changes since FriCAS 1.0.4:

- improvement to normalize function, it performs now much
  stronger simplifications than before
- better integration: due to improved normalize FriCAS can
  now integrate many functions that it previously considered
  unintegrable
- improvement to Martin Rubey guessing package, for example
  it can now guess differential equation for the generating
  function of integer partitions
- better support for using type valued functions
- several bug fixes


Changes since FriCAS 1.0.3:

User Interface:
- Add a new emacs mode: just (require 'fricas), M-x fricas and enjoy.
- Add support for inline display of LaTeXed code.
- Add support for mouse wheel.
- Supress SBCL style warnings due to autoloading.

Merge Ralf's wonderful new Aldor interface.
Allow calling type-valued functions.
Improve coercion of types.
Add coercions to InputForm.
Improve unparse.
Use SExpression as representation of OutputForm.
Miscellaneous improvements, bug fixes and cleanups.


Approved by <obache>.
2009-01-27 15:54:23 +00:00
markd
1e30aa7089 Update eigen2 to 2.0-beta6
changes unspecified - better handling of systems without posix_memalign.
2009-01-27 12:22:46 +00:00
asau
331426e08b Add DESTDIR support.
Approved by <tnn>.
2009-01-27 12:04:14 +00:00
jschauma
65e9c90d89 Give up maintainership, as I have not so much as looked at pkgsrc in
well over a year now.  Sorry. :-(
2009-01-23 21:14:16 +00:00
drochner
10b3840eb3 update to 1.8.4
changes: bugfixes
2009-01-20 20:43:09 +00:00
he
7ad7d7db57 Update from version 3.1.2 to 3.2, to bring this in line with
the version in math/fftw/.

Pkgsrc changes:
 o Get rid of the powerpc-specific distfile, it's apparently not needed
   anymore
 o Add perl as a tool, so that "make test" can succeed
 o Adjust dependency on math/fftw
2009-01-18 13:00:07 +00:00
obache
ee0ec3fff1 Add REPLACE_OCTAVE feature. 2009-01-18 02:43:38 +00:00
adam
a73e809cc1 Changes 4.35:
* New API routines were added to the package.
* A minor change were made in the internal routine xputc.
* A minor bug was fixed in the internal routine mpl_fn_time2str.
2009-01-17 23:36:22 +00:00
he
a3206e4517 Update from version 0.4200 to 0.4400 (upsteream 0.44).
Pkgsrc changes:
 o Adjust dependencies to fit requirements

Upstream changes:

0.44 8 January 2009

    ! Fix for OpenOffice.org GENERAL format.
      http://rt.cpan.org/Public/Bug/Display.html?id=7206
      Thanks to Niko Tyni and the Debian Perl team

    + Perltidyed source and added standard headers and Pod sections
      to all modules.

0.43 7 January 2009

    + Restructured and rewrote the main documentation. This is the start of
      a general refactoring. If you would like to keep up to date with it
      keep an eye on the Spreadsheet::ParseExcel Google Group.
      http://groups.google.com/group/spreadsheet-parseexcel

    + Added worksheets() Workbook method to iterate over the Worksheet objects.

    + Added unformatted() method to get a Cell's unformatted value.

    + Renamed public methods RowRange(), ColRange() and Cell() to row_range(),
      col_range() and get_cell(). Old methods are still available.

    ! Turned on compatibility_mode() by default in SaveParser to avoid SP3
      problems.

    ! Fixed minor SaveParser bug with font rotation.
      http://rt.cpan.org/Public/Bug/Display.html?id=41626
2009-01-12 23:25:49 +00:00
wiz
df94dbc03f Update to 5.24.3:
Overview of changes in gcalctool 5.24.3

    * Updated documentation: de (Christian Kirbach).
2009-01-12 21:07:32 +00:00
markd
106d9b51cd posix_memalign() only in recent NetBSD's so use malloc() instead. 2009-01-11 11:45:11 +00:00
markd
aa48a78d54 Use posix_memalign() on NetBSD. Bump PKGREVISION. 2009-01-11 10:11:48 +00:00
markd
9e4f0111af add eigen2 2009-01-10 01:04:01 +00:00
markd
e47a540440 Initial import of eigen 2.0beta5
Eigen 2 is a C++ template library for linear algebra: vectors, matrices, and
related algorithms. It is:
* Versatile. Eigen handles, without code duplication, and in a completely
  integrated way:
  o both fixed-size and dynamic-size matrices and vectors.
  o both dense and sparse (the latter is still experimental) matrices and
    vectors.
  o both plain matrices/vectors and abstract expressions.
  o both column-major (the default) and row-major matrix storage.
  o both basic matrix/vector manipulation and many more advanced, specialized
    modules providing algorithms for linear algebra, geometry, quaternions,
    or advanced array manipulation.
* Fast.
  o Expression templates allow to intelligently remove temporaries and enable
    lazy evaluation, when that is appropriate -- Eigen takes care of this
    automatically and handles aliasing too in most cases.
  o Explicit vectorization is performed for the SSE (2 and later) and AltiVec
    instruction sets, with graceful fallback to non-vectorized code.
    Expression templates allow to perform these optimizations globally for
    whole expressions.
  o With fixed-size objects, dynamic memory allocation is avoided, and the
    loops are unrolled when that makes sense.
  o For large matrices, special attention is paid to cache-friendliness.
* Elegant. The API is extremely clean and expressive, thanks to expression
  templates. Implementing an algorithm on top of Eigen feels like just copying
  pseudocode. You can use complex expressions and still rely on Eigen to
  produce optimized code: there is no need for you to manually decompose
  expressions into small steps.
* Compiler-friendy. Eigen has very reasonable compilation times at least with
  GCC, compared to other C++ libraries based on expression templates and heavy
  metaprogramming. Eigen is also standard C++ and supports various compilers.
2009-01-10 01:02:47 +00:00
asau
6abaa16949 Change category to "math" for consistency.
Discussed with tnn@.
2009-01-07 00:00:15 +00:00
he
2e80e73801 Update from version 0.41 to 0.42.
Upstream changes:

0.42 1 January 2009
    + Fix for world writeable files in distro to allow PAUSE indexing.
2009-01-05 13:55:24 +00:00
wiz
55fa90af5f Move scrollkeeper/omf.mk to rarian/omf.mk.
scrollkeeper is nowadays included in rarian, so the omf.mk file should
be there as well.
Adapt all references.
2009-01-04 18:00:58 +00:00
joerg
07bb0d6a4e Needs pkg-config. 2008-12-23 18:27:28 +00:00
minskim
bcea21c41a Update maxima to 5.17.1, based on wip/maxima, which was updated
and tested by Aleksej Saushev and Stathis Kamperis.

Major changes:
- Expand code for special functions
- quad_qagi accepts upper and lower limits instead of flags for limits
- Cut out solve_inconsistent_error
- new, alternate implementation of vector operations
- colorterm: simple output color-coding
2008-12-21 05:04:28 +00:00
minskim
a4a274cfdb Update mathomatic to 14.2.7.
Numerous improvements since 14.0.5. See
http://mathomatic.orgserve.de/changes.txt for the complete list of changes.
2008-12-21 02:02:25 +00:00
reed
2d7478df46 Improve COMMENT and DESCRiptions.
No longer identical.
Don't say Linux since this is for other platforms too.
Don't mention GUI interface in the description for the console package.

By the way, the gtk version is really GNOME, but upstreams calls it gtk.
2008-12-20 18:47:00 +00:00
tnn
3717a16dbf Update to gsl-1.12. From Aleksej Saushev in PR pkg/40200.
This is a maintenance release, which fixes reported bugs and upgrades
the build system to the latest libtool, autoconf and automake.
2008-12-19 23:16:22 +00:00
markd
fff99780da Add py-numpy and py-scipy 2008-12-19 22:16:03 +00:00
markd
7a12b44027 Initial import of py-scipy 0.6.0
SciPy is an open source library of scientific tools for Python. SciPy
supplements the popular Numeric module, gathering a variety of high level
science and engineering modules together as a single package.

SciPy includes modules for graphics and plotting, optimization, integration,
special functions, signal and image processing, genetic algorithms, ODE
solvers, and others.
2008-12-19 22:14:28 +00:00
markd
b4f920b599 user-destdir support. 2008-12-19 22:09:55 +00:00
markd
c59b321927 Initial import of py-numpy 1.1.0
NumPy is a general-purpose array-processing package designed to
efficiently manipulate large multi-dimensional arrays of arbitrary
records without sacrificing too much speed for small multi-dimensional
arrays.  NumPy is built on the Numeric code base and adds features
introduced by numarray as well as an extended C-API and the ability to
create arrays of arbitrary type.

There are also basic facilities for discrete fourier transform,
basic linear algebra and random number generation.

Pkgsrc issue: if the package build happens to find a fortran it prefers
over the one pkgsrc is using it will try to use it and the wrong thing
will happen.
2008-12-19 22:04:36 +00:00
adam
1c894005a1 Changes 4.34:
* The GNU MathProg modeling language was supplemented with three
  new built-in functions:
	gmtime    obtaining current calendar time
	str2time  converting character string to calendar time
	time2str  converting calendar time to character string
* For detailed description of these functions see Appendix A in
  the document "Modeling Language GNU MathProg", a new edition of
  which was included in the distribution.
* A bug was fixed in the MIP solver.
* A new makefile was added to build the GLPK DLL with Microsoft
  Visual Studio Express 2008 for 64-bit Windows.
2008-12-19 19:47:38 +00:00
joerg
4ecaf785e5 Fix build with newer bison. 2008-12-19 14:04:07 +00:00
tnn
14d7ed9d10 Update to algae-4.3.6. From Aleksej Saushev.
Version 4.3.6 (February 22, 2004)
* Fixed a label handling error in the `set' function that was
  introduced in version 4.3.1.  Also cleaned up and documented
  Label handling in `complement', `intersection', and `union'.

Version 4.3.5 (February 11, 2004)
* Added support for short int endian conversions in `fread'.  This
  was a quick fix -- we really need to go through that code (and
  `fwrite') to clean it up and support a variety of missing cases.

Version 4.3.4 (December 16, 2003)
* Fixed disassemble bug causing wipeout on `veil' statement.
* Now use --enable-debug instead of --with-debug in configure.
  (It was and has been broken since version 4.3.0.)

Version 4.3.3 (December 9, 2003)
* By default, use Doug Lea's dlmalloc package in place of the
  C library's malloc.  On some systems, dlmalloc is far superior.
  For example, Algae's timing suite runs 2.5 times faster with
  dlmalloc than with the AIX 5.1 malloc routines.  (On Linux,
  dlmalloc is the default anyway.)
* Replaced code for `magic' with faster code from Octave.
* Supplied some missing prototypes that caused trouble.
* Quit installing header files.  Not sure how or why that got
  started, but if you have installed previous versions of Algae,
  you may have junk left around in /usr/src/algae.

Version 4.3.2 (November 29, 2003)
* Ouch!  Fixed a nasty bug in `filter'.

Version 4.3.1 (November 24, 2003)
* Several efficiency improvements, some pretty dramatic.
* Short ints supported in `fread' and `fwrite'.
* New functions `erf', `erfc', `gcd', `lcm', `primef', `primes', and
  `trapz'.

Version 4.3.0 (October 4, 2003)
* Enable linking to fftw (http://www.fftw.org/) for high-performance
  Fourier transforms.
* The `fft' and `ifft' functions now handle matrices.  By default
  they transform each column, but that can be changed with an option.
* The `max' and `min' (and `imax' and `imin') functions now handle
  matrix and table arguments.  Note:  The old versions converted
  matrix arguments to vectors, if possible; the new versions may
  give different results in those cases.

* The new `circshift' function performs circular shifts of arrays.
* Minor code changes to support Mac OS X.
* Fixed several potential buffer overrun problems.
* Included latest (3 June 2003) SuperLU updates.
* Included current ARPACK patches.

Version 4.2.1 (August 6, 2003)
* Added the `$digits' global variable.

Version 4.2.0 (August 5, 2003)
* New `veil' statement allows temporary changes to global variables.

Version 4.1.4 (August 2, 2003)
* Improved configuration for floating point exception handling.
* Added numerous "volatile" qualifiers, to protect against longjmp
  problems with optimized gcc.
* Fix `select' function for zero-length vectors.
2008-12-14 13:19:15 +00:00
wiz
2cc0163696 + texdrive. 2008-12-09 12:20:35 +00:00
wiz
3a087ae2cb Initial import of texdrive-0.0.20081126:
texdrive is an emacs minor-mode for adding mathematical equations
to html-pages; things like Euler's identity, Pythagoras theorem
and so on.
2008-12-09 12:19:59 +00:00
ahoka
1d6bfa069d MAKE_JOBS_SAFE= no 2008-12-05 19:02:09 +00:00
wiz
eb733f7f5c Update to 5.24.2:
Overview of changes in gcalctool 5.24.2

    * Re-enable trigonometric types which have been disabled since 2.24.0 (Robert Ancell, Bug #559575)

    * Remember setting to ignore change mode warning between instances (Robert Ancell, Bug #556407)

    * Always read configuration from /apps/gcalctool not /apps/(appname) as
      the application name is different when symlinked (Matt Keenan, Bug #559260).

    * Open help with gtk_show_uri() (Thomas Andersen, Bug #556207).

    * Removed double conversion in boolean and 32 bit and 16 bit mask operations so
      they can handle larger numbers (Robert Ancell, Bug #509988)

    * Updated translations: et (Ivar Smolin), pt_BR (Leonardo Ferreira Fontenelle), uk (Maxim Dziumanenko).
2008-12-02 13:35:11 +00:00
adam
e7f4d5c8a2 Changes 3.2:
* Worked around apparent glibc bug that leads to rare hangs when freeing
  semaphores.
* Fixed segfault due to unaligned access in certain obscure problems
  that use SSE and multiple threads.
* MPI transforms not included, as they are still in alpha; the alpha
  versions of the MPI transforms have been moved to FFTW 3.3alpha1.
* Performance improvements for sizes with factors of 5 and 10.
* Documented FFTW_WISDOM_ONLY flag, at the suggestion of Mario
  Emmenlauer and Phil Dumont.
* Port Cell code to SDK2.1 (libspe2), as opposed to the old libspe1 code.
* Performance improvements in Cell code for N < 32k, thanks to Jan Wagner
  for the suggestions.
* Cycle counter for Sun x86_64 compiler, and compilation fix in cycle
  counter for AIX/xlc (thanks to Jeff Haferman for the bug report).
* Fixed incorrect type prefix in MPI code that prevented wisdom routines
  from working in single precision (thanks to Eric A. Borisch for the report).
* Added 'make check' for MPI code (which still fails in a couple corner
  cases, but should be much better than in alpha2).
* Many other small fixes.
2008-11-18 11:13:06 +00:00
he
6ceb5f397b Updated from version 2.23nb1 to 2.25.
Upstream changes:

2.25 September 9 - Minor

    + Fix for set_properties() bug due to 5.10/5.8 UTF-8 differences.
    + Fix for failing tests due to localtime() issues.

2.24 September 6 - Minor

    + Added set_properties() method to set document properties.
      Added test suite and example.
2008-11-18 06:11:01 +00:00
he
9f252fad80 Update from version 0.32nb1 to 0.41.
Pkgsrc changes:
 o Update to use Module::Build
 o Adjust MASTER_SITES, dist not present in common directory
   (reported upstream)

Upstream changes:

0.41 24 October 2008

    + Changed maintainership to John McNamara.

    ! Fixed bug when parsing RK numbers (generally ints or small floats).
      http://rt.cpan.org/Public/Bug/Display.html?id=39892

    ! Changed margin units to inches to (cleanly) avoid undef warning in
      SaveParser.


0.33 2008.09.07
    - Default format for formatted dates changed from 'm-d-yy' to 'yyyy-mm-dd'
    - Numeric fields with date-formats now promote to Date
    - Added docs about date type 14 problem
    - skip another test when prereq is missing
    - split Spreadsheet::ParseExcel::SaveParser into packages
    - split Spreadsheet::ParseExcel into packages
2008-11-18 06:03:58 +00:00
he
8ea9a718fb Update from version 2.04nb1 to 2.05.
Pkgsrc changes:
 o Add a patch to make ExtUtils::MakeMaker emit use of the gmp
   library.  Actual use will be handled by bulidlink / wrapper.
 o Added commented-out extra modules which can be optionally
   used during "make test" if various TEST_* environment variables
   are set.

Upstream changes:

2.05  2008-10-06 Greg
    - New maintainer: Greg Sabino Mullane
    - Allow tests to work on 64-bit platforms. Patch from Flo.
      (CPAN bugs #5960, #30327, #27641, #12751, #15459)
    - Add support for probab_prime function. Patch by shlomif@iglu.org.il.
      (CPAN bug #6184)
    - Get smarter about detecting lack of GMP libraries.
      (CPAN bug #18709)
    - Add META.yml and some more tests.
2008-11-18 05:46:55 +00:00
chuck
41bffb4c96 import compile fixes from devel branch 1.9.3... must define
NO_IMPORT_PYGOBJECT in plugins/python-loader to avoid link
errors
2008-11-15 02:02:13 +00:00
dmcmahill
b67b31dc45 Address tmp file vulnerability noted at
http://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2008-4983

Bump pkgrev.
2008-11-15 01:19:08 +00:00
wiz
285b7dd776 Bump PKGREVISION for libXaw API depends bump due to libXaw8 removal. 2008-11-10 17:21:33 +00:00
adam
b24b44f4d0 Changes 4.33:
* New API routines
* A crude implementation of CPLEX-like interface to GLPK API was
  added to the package. Currently it allows using GLPK as a core
  LP solver for Concorde, a well known computer code for solving
  the symmetric TSP.
* Some bugs were fixed in the SQL table driver.
2008-11-07 20:01:29 +00:00
jwise
1a38f1ecdc Remove octave-current. 2008-11-07 16:00:25 +00:00
jwise
92df7ab249 Per discussion with maintainer, remove octave-current, which is
substantially less current than the current octave.
2008-11-07 15:59:57 +00:00
snj
b9f5ac7585 Update to 5.1. Now uses gtk2. Changes are mostly small bugfixes and UI
tweaks.  See bundled changelog for full details.
2008-11-02 16:56:15 +00:00
abs
d88b581d63 Added math/p5-Math-BaseCnv 2008-10-26 19:16:19 +00:00
abs
3fd54eeef8 Added math/p5-Math-BaseCnv version 1.4.75
BaseCnv provides a few simple functions for converting between
arbitrary number bases. It is as fast as I currently know how to
make it (of course relying only on the lovely Perl). If you would
rather utilize an object syntax for number-base conversion, please
see Ken Williams's <Ken@Forum.Swarthmore.Edu> fine Math::BaseCalc
module.
2008-10-26 19:12:13 +00:00
adam
b6441dac9f Changes 3.0.3:
* Bug fixes
* Improvements
2008-10-25 08:26:12 +00:00
wiz
ac3ab8d6a7 Update to 5.24.1:
Overview of changes in gcalctool 5.24.1

    * Fixed GtkSpinButton warning (Robin Sonefors, Bug #553965)

    * Only update bit panel when display contains a solved number (Bug #548690).

    * gcalctool/gtk.c: Remove inline declaration so can compile in C89 (Jens Granseuer, Bug #553307).

    * Updated translations: ar (Anas Afif Emad), bg (Alexander Shopov), pt_BR (Vladimir Melo).

Overview of changes in gcalctool 5.24.0

    * Updated translations: af (Friedel Wolff), ar (Anas Afif Emad, Khaled Hosny),
                            bn_IN (Sankarshan Mukhopadhyay), da (Kenneth Nielsen),
                            dz (Pema Geyleg), gu (Sweta Kothari),
                            hr (Robert Sedak), hu (Gabor Kelemen),
			    it (Luca Ferretti), kn (Shankar Prasad),
			    ko (Changwoo Ryu), lt (Gintautas Miliauskas),
                            ml (Sreejith K incorporated, Praveen Arimbrathodiyil),
                            mr (Sandeep Shedmake), ro (Mişu Moldovan),
                            sq (Laurent Dhima), ta (Tirumurthi Vasudevan),
                            te (Krishnababu K), tr (Baris Cicek),
                            zh_CN (Funda Wang)

    * Updated help: es (Jorge Gonzalez)
----

Overview of changes in gcalctool 5.23.92

    * Updated translations: en_GB (Philip Withnall), ca (Gil Forcada),
                            bg (Alexander Shopov)

----

Overview of changes in gcalctool 5.23.91

    * Fix packing for modulus button (Bug #548880)

    * Change from OnlyShowIn=GNOME;XFCE; to NotShowIn=KDE; so
      other desktops can use GCalctool (bug #518862).

----

Overview of changes in gcalctool 5.23.90

    * Fix some small memory leaks (Felix Riemann, Bug #547942)

    * More work tidying up MP code (Klaus Niederkrueger, Robert Ancell, Bug #524091)

    * Updated translations: ar (Khaled Hosny), fi (Ilkka Tuohela), he (Yair Hershkovitz), ja (Takeshi Aihana), pt (Duarte Loreto), sk (Marcel Telka)

    * Updated documentation: ru (Yuriy Penkin)

----

Overview of changes in gcalctool 5.23.6

    * Deprecated left-to-right mode (Bug #500994).

    * Updated remaining documentation (bg, zh_CN, zh_HK, zh_TW) to gnome-doc-utils (Robert Ancell, Bug #336104)

    * Changed icon from deprecated 'gnome-calculator' to 'accessories-calculator') (Matthias Clasen, Bug #545074)

    * Updated translations: ar (Djihed Afifi), fr (Claude Paroz), pt_BG (Fabrício Godoy)

----

Overview of changes in gcalctool 5.23.5

    * Fix regression in factorial operation (Klaus Niederkrueger)

    * Made trigonometric button text translatable (Yuri Penkin, Bug #540196)

    * More work tidying up MP code (Klaus Niederkrueger, Robert Ancell, Bug #524091)

    * Updated Japanese documentation to gnome-doc-utils (Claude Paroz, Takeshi Aihana, Bug #336104)

    * Updated translations: ca (Joan Duran), oc (Yannig Marchegay), ru (Yuriy Penkin), sv (Daniel Nylander), th (Theppitak Karoonboonyanan)

----

Overview of changes in gcalctool 5.23.4

    * Added workaround to stop display disappearing when editing large displays (Bug #524602)

    * Applied second mp math tidy up patch from  Klaus Niederkrueger (Bug #524091)

    * Updated translations: ar (Djihed Afifi)

----

Overview of changes in gcalctool 5.23.3

    * Default to no thousands separator not ',' for locales that do not require one (Bug #527669)

    * Updated translations: ar (Djihed Afifi), et (Ivar Smolin), vi (Clytie Siddall)

----

Overview of changes in gcalctool 5.23.2

    * Fixes the cursor from moving around when editing numbers with thousands separators (Bug #527669)

    * Structural changes in preperation for full unicode support (Bug #530532)

    * Updated translations: es (Jorge González), gl (Ignacio Casal Quinteiro), nb (Kjartan Maraas),
      nl (Tino Meinen), pt_BR (Leonardo Ferreira Fontenelle), sl (Matej Urbančič)

----

Overview of changes in gcalctool 5.23.1

    * Fixes a number of compiler warnings (Bugs #526976, #526702, #527318)

    * Fixes incorrect negation precedence (Bug #526094)

    * Fixes issues with thousands seperators and radix in non-english
      locales (Bug #527669)

    * Fixes regression in constant and function menus (Bug #527545)

    * Fixes problem where display is invisible after solving equation
      (Bug #524602)
2008-10-25 00:43:23 +00:00
he
c2b6ab8812 Add p5-Excel-Template-Plus. 2008-10-20 22:59:00 +00:00
he
a311d22bc4 Import p5-Excel-Template-Plus version 0.04.
This module is an extension of the Excel::Template module, which
allows the user to use various "engines" from which you can create
Excel files through Excel::Template.
2008-10-20 22:57:45 +00:00
he
33c5b78803 Added p5-Excel-Template. 2008-10-20 22:42:13 +00:00
he
b73ae5a0fa Import p5-Excel-Template version 0.31.
This is a module used for templating Excel files. Its genesis came
from the need to use the same datastructure as HTML::Template, but
provide Excel files instead. The existing modules don't do the
trick, as they require replication of logic that's already been
done within HTML::Template.
2008-10-20 22:41:15 +00:00
he
b021813da0 Bump the PKGREVISION for all packages which depend directly on perl,
to trigger/signal a rebuild for the transition 5.8.8 -> 5.10.0.

The list of packages is computed by finding all packages which end
up having either of PERL5_USE_PACKLIST, BUILDLINK_API_DEPENDS.perl,
or PERL5_PACKLIST defined in their make setup (tested via
"make show-vars VARNAMES=...").
2008-10-19 19:17:40 +00:00
markd
f0aa215f11 fixup patch from previous. 2008-10-14 22:41:44 +00:00
markd
be58740a08 Add R-sp and R-circular 2008-10-14 09:40:08 +00:00
markd
0cdcc92b1b Update R-gstat to 0.9.51
many bug fixes
2008-10-14 08:24:23 +00:00
markd
de62564903 Update R-geoR to 0.9.26
Changes unknown
2008-10-14 08:19:07 +00:00
markd
5820bed8fb Initial import of R-sp version 0.9.26
A package that provides classes and methods for spatial data. The classes document
where the spatial location information resides, for 2D or 3D data. Utility functions
are provided, e.g. for plotting data as maps, spatial selection, as well as methods
for retrieving coordinates, for subsetting, print, summary, etc.
2008-10-14 08:15:24 +00:00
markd
524e4b86ae Update R-clim.pact to 2.2.15
Changes unknown
2008-10-14 08:00:31 +00:00
markd
8bdea11266 Update R-genetics to 1.3.4
genetics 1.3.4 - 2008-08-20
---------------------------

- Fix bug in makeGenotypes that caused it to ignore the 'sep' argument
  when determining which columns contain genotypes & add a corresponing
  regression test


genetics 1.3.3 - 2007-04-29
---------------------------

- Correct 'obsolete' use of '$'.  R no longer permits '$' to be used
  to extract named elements from vectors (just lists).

- Remove the power.casectl() function, which was based on invalid
  assumpations.  It has been marked depreciated.  Please use the
  functions in the Bioconductor package 'GeneticsDesign' instead.

genetics 1.3.2 - 2007-11-20
---------------------------

- Fix bug in handling of assignment of NA value(s) to elements of an
  existing genotype object.

- Fix warning messages from R CMD CHECK

- Correct documentation error by swapping definitions of kp and alpha
  arguments of power.casectl().

genetics 1.3.1
--------------

- fixes in genotypeOrder to ensure all genotype/haplotype combinations
  are used.

- genotypeOrder<- is now exported

genetics 1.3.0
--------------

- A note is now displayed on startup:

  The R-Genetics project has developed an set of enhanced genetics
  packages that will shortly replace 'genetics'. Please visit the
  project homepage at http://rgenetics.org for more information.

- binsearch() has been moved to the gtools package

- New function groupGenotype to create groups/levels based on genotype
  names

- Added some internal utility functions
  (.genotype2Haplotype, .genotype2Allele, and .matchGenotype)

- Genotype class gets additional slot genotypeOrder (and genotype()
  function gets additional argument with the same name) in order to enable
  predefined order of genotypes in other functions e.g. summary

- Added order, sort and %in% methods for genotype and haplotype classes.

- Fixed genotype() with allow.partial.missing=FALSE when 'alleles' argument
  is passed

- There is no more warning in genotype() if 'a1' or 'a2' have NA value(s)
  and 'alleles'' argument is specified, since NA is NA anyway

- Fixed documentation of power.casectrl()

- added gtools to Depends as needed by expectedGenotypes(); the latter now
  gives sorted genotypes according to order of given alleles

- print.HWE.test() wasn't displaying the observed vs expected genotype
  frequency table.  Fixed.

genetics 1.2.1
--------------

- Update Greg's email address

- Fixed a bug in function allele.number, as pointed out by Chris
  Wallace
2008-10-14 07:38:26 +00:00
markd
0a301a0c71 Update R-gdata to 2.4.2
CHANGES IN 2.4.2 (2008-05-11)
-----------------------------

- Enhancements and bug fixes for read.xls() and xls2csv():

    - More informative log messages when verbose=TRUE

    - File paths containing spaces or other non-traditional characters
      are now properly handled

    - Better error messages, particularly when perl fails to generate
      an output .csv file.

    - The 'shortcut' character "~" (meaning user's home directory) is
      now properly handled in file paths.

    - XLS files created by OpenOffice are now properly handled.  Thanks to
       Robert Burns for pointing out the patch
       (http://rt.cpan.org/Public/Bug/Display.html?id=7206)

CHANGES IN 2.4.1 (2008-03-24)
-----------------------------

- Update perl libraries needed by xls2csv() and read.xls()
  to latest available versions on CRAN.

- Add read.xls() to exported function list

- Correct iris.xls example file.  It didn't contain the complete
  & properly formatted iris data set. Fixed.

- Fix typo in win32 example for read.xls()

CHANGES IN 2.4.0 (2008-01-30)
-----------------------------

- The keep() function now includes an 'all' argument to specify how
  objects with names starting with '.' are handled.

- keep() now shows an informative warning message when a requested
  object does not exist

- New vignette "Mapping Levels of a Factor" describing the use of
  mapLevels().

- New vignette "Working with Unknown Values" describing the use of
  isUnknown() and unknownToNA().

- Several enhancements to read.xls() (thanks to Gabor Grothendieck):

  - New function xls2csv(), which handles converting an xls file
    to a csv file and returns a connection to the
    temporary csv file

  - xls2csv() and read.xls() both allow a file or a url to be specified

  - read.xls() has a new 'pattern' argument which, if supplied,
    will ignore everything prior to the first line in th csv file
    that matches the pattern.  This is typically used if there
    are a variable number of comment lines prior to the header
    in which case one can specify one of the column
    headings as the pattern.  read.xls should
    be compatible with the old read.xls.

- Minor fixes to drop.levels(), is.what().

- Implementation of unit tests for most functions.

CHANGES IN 2.3.1 (2006-10-29)
-----------------------------

- Arguments as well as their position of reorder.factor have been changed
  to conform with reorder.factor method in stats package, due to collision
  bug. Argument 'make.ordered' is now 'order' and old argument 'order' is
  now 'new.order'! Therefore, you have to implicitly specify new.order i.e.

  reorder(trt, new.order=c("PLACEBO", "300 MG", "600 MG", "1200 MG"))

- trim() gains ... argument.

- Added "unknown" methods for matrices.

- Added c() method for factors based on mapLevels() functions.

- Added write.fwf, which writes file in *F*ixed *W*idth *F*ormat.

CHANGES FROM 2.1.X to 2.3.0 (2006-09-19)
---------------------------------------

- Added mapLevels(), which produces a map with information on levels and/or
  internal integer codes.  Contributed by Gregor Gorjanc.

- Extended dropLevels() to work on the factors contained in a data
  frame, as well as individual factors.

- Add unknown(), which changes given unknown value to NA and vice
  versa. Contributed by Gregor Gorjanc.

- Extended trim() to handle a variety of data types data.frames,
  lists, factors, etc.  Code changes contributed by Gregor Gorjanc.

- Added resample() command that acts like sample() except that it
  _always_ samples from the arguments provided, even if only a single
  argument is present.  This differs from sample() which behaves
  differently in this case.

- Updated my email address.
2008-10-14 07:31:26 +00:00
markd
b9756076fa Update R-Rcmdr to 1.4.2
Changes unknown
2008-10-14 07:25:31 +00:00
markd
48eb9ac3cf Update R-wle to 0.9.3
Changes unknown
2008-10-14 07:16:50 +00:00
markd
b2f8b87041 Initial import of R-circular version 0.3.8
Circular Statistics, from "Topics in circular Statistics".
2008-10-14 07:12:44 +00:00
markd
88fc959826 Update R-gtools to 2.5.0
gtools 2.5.0
------------

New features:

- Add checkRVersion() function to determin if a newer version of R is
  available.

- Deprecated assert() in favor of base::stopifnot

Bug fixes:

- Fix bug in binsearch() identified by 2.6.0 R CMD CHECK

Other changes:

- Improve text explanation of how defmacro() and strmacro() differ from
  function().

- Update definitions of odd() and even() to use modulus operator
  instead of division.

gtools 2.4.0
------------

- Add binsearch() function, previously in the genetics() package.


gtools 2.3.1
------------

- Add ask() function to prompt the user and collect a single response.


gtools 2.3.0
------------

- Update email address for Greg

- Add new 'smartbind' function, which combines data frames
  efficiently, even if they have different column names.
2008-10-14 06:51:09 +00:00
markd
dfccae158f Update R-httpRequest to 0.0.6
Changes unknown
2008-10-14 06:44:25 +00:00
markd
88eef5c677 Update R-hwde to 0.5
Changes unknown
2008-10-14 06:41:35 +00:00
markd
7bcdb60f06 Update R-lmm to 0.3.5
Changes unknown
2008-10-14 06:38:21 +00:00
markd
3e92108ae2 Update R-mapproj to 1.1.7.2
Changes unknown
2008-10-14 06:01:48 +00:00
markd
5f8ecffb15 Update to R-maps 2.0.40
Changes unknown
2008-10-14 05:54:25 +00:00
markd
69f1d0afb2 Update R-mvtnorm to 0.9.2
Changes unknown.
2008-10-14 05:47:36 +00:00
markd
512e2a4c89 Fix homepage. 2008-10-14 05:42:14 +00:00
markd
f5cdb0f9f4 Update R-pixmap to 0.4.9
Changes in pixmap version 0.4-9

   o Fixed a minor glitch in write.pnm.

Changes in pixmap version 0.4-8

  o Fixed a bug that prevented plotting images with only 1 row (bug
    report by Robert Esswein).

Changes in pixmap version 0.4-7

  o Use LazyLoad instead of SaveImage.

Changes in pixmap version 0.4-6

  o Modified one of the regression tests for changes in R 2.4:
    terrain.colors() now return transparency information
    -> do not use it in example.

Changes in pixmap version 0.4-5

  o standardized license filed in DESCRIPTION file.
2008-10-14 05:35:47 +00:00
markd
b60b86cf34 Update R-statmod to 1.3.6
Changes unknown
2008-10-13 19:28:48 +00:00
markd
970e528486 Update R-shapefiles to 0.6
Changes unknown.
2008-10-13 19:27:42 +00:00
markd
24775ec760 Update R-sgeostat to 1.0.21
minor bugfixes.
2008-10-13 19:26:12 +00:00
markd
bde5851c2c Update R-date to 1.2.26
2007-12-24  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-26.

	* R/date.R (summary.date): Add ... so that na.rm can be used,
	Suggested by Steven McKinney <smckinney@bccrc.ca>.

2007-07-12  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-25.
	(License): Clarify.

2007-02-01  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* inst/CITATION: Get date/year and version from the package
	metadata.

2006-12-19  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-23.

	* R/date.R (as.character.date): Add missing ... argument.

2006-09-29  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-22.

	* R/date.R: Fix invalid escapes.

2006-09-09  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-21.
	(Depends): Added.

2006-08-05  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-20.

	* man/as.date.Rd: Fix inconsistency spotted by Antony Unwin
	<unwin@math.uni-augsburg.de>.

2006-06-26  Kurt Hornik  <Kurt.Hornik@wu-wien.ac.at>

	* DESCRIPTION (Version): New version is 1.2-19.

	* inst/CITATION: New file.
2008-10-13 11:38:19 +00:00
markd
9e10abaea4 Fix homepage. 2008-10-13 11:35:13 +00:00
markd
f1a3bd0792 Update R-chron to 2.3.24
4 years of updates.
2008-10-13 11:34:21 +00:00
markd
9400160ed8 Fix homepage. 2008-10-13 11:31:32 +00:00
markd
db49826f4a Fix homepage. 2008-10-13 11:30:50 +00:00
markd
bbeebe2dbf Update R-RArcInfo to 0.4.7
Changes Unknown
2008-10-13 11:29:42 +00:00
markd
6b8ff16b48 Update R-R2HTML to 1.59
# 2008-05-23 - Version 1.59

- Corrected call of unexported function from
  Sweave.R (utils package) in RweaveHTMLWritedoc.

- Corrected explicit call of S3Method print from
  package xtable.

- Corrected explicit call of S3Method from package
  nnet.

- Corrected explicit call of isInitialized from
  nlme package.

- Corrected explicit call of volume from
  cluster package.

- Corrected explicit calls of imp.moments
  from boot package.

- Corrected explicit calls of splineOrder and
  splineKnots from splines package.

- Corrected explicit call of date.ddmmmyy from
  survival package.

- Fixed rpart HTML S3 method to include tree.depth
  function  defined internally, as rpart package is not
  exporting it anymore.

- Fixed .HTML.file warning of no visible bindings
  in almost every function of the package.

- Fixed bug in HTML.data.frame outputing invalid
  code (missing opening <tr>) when row.names was
  set to FALSE. As patch submited by Michael Irskens and
  also reported by Rik Schoemaker.

- Fixed bug in HTML.matrix, opening of <tbody>
  wasn't being carried. Pending the fixing of
  excess of </tr>'s.

- Fixed miscelaneous bugs in CSS files.

# 2006-09-28 - Version 1.58

- Fixed bug in HTMLcore.R (unintended \ interpolation)

- Fixed bug in HTMLfi() call inside HTML.summary.lm,
  which made R CMD check fail on Windows.

- Uniformization of capitalization of HTML tags
  (to lowercase), in conformity with the
  XHTML 1.0 standard.

- Updated HTML.data.frame to include row.names
  option, as contributed by Tobias Verbeke on
  2006-05-27.


# 2006-07-04 - Version 1.57

- Added the HTML2clip wrapper, suggested by Gabor
  Gronthendieck.

- Miscelaneous fixes to documentation (contributed
  by Tobias Verbeke)

- Cleaning up of man directory of spurious files as
  suggested by Kurt Honik
2008-10-13 11:27:50 +00:00
markd
04205b1684 Update R-PHYLOGR to 1.0.6
Changes unknown
2008-10-13 11:24:40 +00:00
markd
be2f59c1db Update R-Matrix to 0.999375.15
lots of bug fixes and new functionality.
2008-10-13 11:22:46 +00:00
markd
986d7b3baa Update R-ISwR to 2.0.2
Changes unknown.
2008-10-13 11:19:45 +00:00
markd
5357f53a33 Update R-GRASS to 0.3.7
Changes unknown.
2008-10-13 11:17:04 +00:00
markd
37023d1687 Update R-DAAG to 0.97
Changes unknown
2008-10-13 11:14:55 +00:00
markd
d9764d87e0 Update R-CGIwithR to 0.72.
Changes unknown.
2008-10-13 11:12:52 +00:00
markd
71b28bb2f8 user-destdir support from Masao Uebayashi with minor changes from me.
also update R_HOMEPAGE_BASE
2008-10-13 11:08:31 +00:00
adam
5d55a849cc Changes 4.32:
The following new features were included in the MIP solver
*  MIP presolver
*  mixed cover cut generator
*  clique cut generator
*  Euclidean reduction of the objective value

Due to changes the routine glp_intopt may additionally return
GLP_ENOPFS, GLP_ENODFS, and GLP_EMIPGAP.

The API routines lpx_integer are lpx_intopt are deprecated,
since they are completely superseded by glp_intopt.

The following new branch-and-cut API routines were added:
glp_ios_row_attr      determine additional row attributes
glp_ios_pool_size     determine current size of the cut pool
glp_ios_add_row       add constraint to the cut pool
glp_ios_del_row       delete constraint from the cut pool
glp_ios_clear_pool    delete all constraints from the cut pool
2008-10-13 08:57:26 +00:00
uebayasi
34004f51e0 Move mk/emacs.mk to editors/emacs/modules.mk.
Don't call pkg_info to get the installed Emacs version; always use the
version matching EMACS_TYPE set by users.  Be DEPENDS to it.  This should
address pkg/37146 by Aleksey Cheusov.

While here convert some emacs lisp packages to user-destdir.
2008-10-11 09:31:54 +00:00
ahoka
0d5df9fd51 Changes since FFTW 3.1.2:
* Bug fix: FFTW computes incorrect results when the user plans both
  REDFT11 and RODFT11 transforms of certain sizes.  The bug is caused
  by incorrect sharing of twiddle-factor tables between the two
  transforms, and only occurs when both are used.  Thanks to Paul
  A. Valiant for the bug report.
2008-10-09 09:08:21 +00:00
joerg
3722c7f2b5 Catch up with PLIST changes. Bump revision. 2008-09-19 14:39:00 +00:00
bjs
3edf18d86b Pass pkgsrc ${CFLAGS} to the build via ${DEBUG}. 2008-09-17 15:23:19 +00:00
ahoka
18dbb96a00 Imported math/fricas. 2008-09-14 12:29:56 +00:00
ahoka
207dd9a17f Import fricas-1.0.3 as math/fricas.
Packaged by Aleksej Saushev with help from Yorick Hardy
in the pkgsrc-wip project.


FriCAS is a fork of Axiom.

FriCAS algebra library is written in a high level strongly typed
language (Spad), which allows natural expression of mathematical
algorithms.

FriCAS uses lightweight developement methodology.  Compared to Axiom
FriCAS is significantly restructured -- it is more portable and fixed
several defects.  FriCAS removed rather large unused parts (without
removing functionality).  It is expected that FriCAS will be much
easier to maintain than original Axiom.
2008-09-14 12:25:00 +00:00
jnemeth
356dcc588c sort 2008-09-11 21:27:08 +00:00
adam
ad772600da Changes 3.0.2:
* Bug-fix release.
2008-09-11 10:26:41 +00:00
adam
f8c3caa094 Changes 4.31:
* The core LP solver based on the dual simplex method was
  re-implemented and now it provides both phases I and II.

* New API routines.

* For description of these new routines see the reference manual
  included in the distribution.

* The following API routines are deprecated:
  lpx_scale_prob, lpx_std_basis, lpx_adv_basis, lpx_cpx_basis.

* Necessary changes were made in memory allocation routines to
  resolve portability issues for 64-bit platforms.

* New version of the routine lpx_write_pb to write problem data
  in OPB (pseudo boolean format) was added to the package.

* Two new makefiles were added to build the package for 32- and
  64-bit Windows with Microsoft Visual Studio Express 2008.

* Two new makefiles were added to build the package with Digital
  Mars C/C++ 8.50 and Open Watcom C/C++ 1.6 (for 32-bit Windows).
2008-09-08 07:15:01 +00:00
obache
6795d0511f Update xeukleides to 1.0.1.
Pkgsrc changes:
* Update MASTER_SITES (Thanks for Zafer Aydogan) and HOMEPAGE.
* Honer PKGMANDIR
* add DESTDIR support

NEWS in 1.0.1
* `disc' point shape.
* Makefile improvement.
2008-09-02 05:33:32 +00:00
obache
7804ce4efb Update eukleides to 1.0.3.
Pkgsrc changes:
* Update MASTERE_SITES (Thanks for Zafer Aydogan) and HOMEPAGE.
* add DESTDIR support

NEWS in 1.0.3
* Improvement of `frame' and `box' commands.
NEWS in 1.0.2
* `disc' point shape.
* Makefile improvement.
2008-09-02 05:28:44 +00:00
obache
236023b4ae Distfile is only available via ftp site.
Noticed by Zafer Aydogan via private mail.
It contains version number in file name. no need to use DIST_SUBDIR anymore.
2008-09-02 03:11:08 +00:00
obache
9139957969 MASTER_SITES is not available now.
Noticed by Zafer Aydogan via private mail.
Also update HOMPEGE, and add commented out SourceForge as MASTER_SITES,
it only have newer version.
2008-09-02 02:59:35 +00:00
obache
485c7f5211 Location on MASTER_SITE_SUNSITE has beenn changed.
Noticed by Zafer Aydogan via private mail.
Also primary? MASITERE_SITE and HOMPEAGE is not resolved anymore,
removed and commented out.
2008-09-02 02:39:44 +00:00
obache
dbc2a8db6f MASTER_SITES (and HOMPAGE) gone away, change MASTER_SITE to site still have
this version.
Noticed by Zafer Aydogan via private mail.
HOMEPAGE also is changed to SourceForge project,
but it don't have old version though.
2008-09-02 02:08:33 +00:00
markd
43a0a3b29e Update to R 2.7.2
NEW FEATURES

    o   sprintf() returns elements of the result in UTF-8 when the
        format or any character input has a corresponding element
        declared as UTF-8.  Similarly for paste(), elements of the
        result are in UTF-8 when any input to that element is declared
        as UTF-8.

    o   axis() has new arguments 'col.ticks' and 'lwd.ticks' to allow
        the colour and line width of ticks to be set separately from
        that of the line (e.g. to set one or the other to transparent
        or zero width).

    o   legend() has a new argument 'box.col' to set the colour of the
        enclosing box.

    o   legend() gains a 'xpd' argument to make it easier to place a
        legend in the margins or outer margins.

    o   stripchart() now passes '...' to title() (as well as to
        plot.default() and axis()). (Wish of PR#12202)

    o   help.search() has new argument 'searchEngine' to go
        directly to the search form: this is needed by users of
        Firefox 3 to workaround a bug in interpreting the search
        results pages.

+ BUG FIXES

2.7.1 NEW FEATURES

    o   tools::texi2dvi() has a new argument 'texinputs' to allow the
        TeX and bibtex input paths to be specified (even on MiKTeX).

    o   dev.copy2pdf() gains an 'out.type' argument to allow it to be
        used with cairo_pdf() or quartz(type = "pdf").

    o   poly() has additional checks against user error (as in PR#11243).

    o   The Mac OS quartz() device draws contiguous lines much faster.

    o   A field containing just a sign is no longer regarded as numeric
        (it was on all platforms in 2.7.0, but not on most in earlier
        versions of R).  Similarly, '.' is now always non-numeric.

    o   CITATION files are now read in Latin-1: quite a few were
        failing if used in a multibyte locale such as UTF-8.

    o   The DESCRIPTION file of a package can specify an 'OS_type' field
        as either 'unix' or 'windows' to confine installation to that
        OS type.

    o   HoltWinters() now uses optimize() rather than optim for
        one-parameter problems which should be more reliable (PR#11469).

    o   axis() now respects the setting of par("xpd") when clipping.

    o   The 'factor' method of format() now preserves names, dims and
        dimnames in the same way as for character and numeric inputs.
        (PR#11512)

    o   read.DIF(*, transpose=TRUE) now allows to correctly read DIF files
        produced by some versions of Excel.

DEPRECATED & DEFUNCT

    o   The use of unserialize() on character strings is deprecated:
        that was a format used in R < 2.4.0.

    o   The use of embedded nuls in character strings is deprecated:
        They will no longer be allowed in R 2.8.0.


UTILITIES

    o   R CMD check checks for possible check directories in the
        sources -- in mid-2008 there were about 20 examples on CRAN.

    o   R CMD build tries harder to clean up the inst/doc directory
        from the remnants of earlier builds.

        It also removes any directories with extension .Rcheck, and
        files .DS_Store and ._* (created by tar on Mac OS X under some
        circumstances: it now sets environment variables to ask for
        such files not to be created by that tar.)


+ BUG FIXES
2008-08-31 12:37:27 +00:00
markd
634a54d2a2 Fix for http://secunia.com/advisories/31647/ from R svn. 2008-08-31 12:33:53 +00:00
ahoka
4ae7eb556e Added math/openaxiom version 1.2.0. 2008-08-28 20:13:18 +00:00
ahoka
c5bb0df004 Import openaxiom-1.2.0 as math/openaxiom.
Packaged by Aleksej Saushev through the pkgsrc-wip project.

OpenAxiom is an open source platform for symbolic, algebraic,
and numerical computations. It offers an interactive environment,
an expressive programming language, a compiler, a large set of
mathematical libraries of interest to researchers and practitioners
of computational sciences.

OpenAxiom strives to support ubiquitous, advanced, high quality
open source computer algebra on major operating systems,
in particular major Unix variants, GNU/Linux variants, Windows,
and handheld devices. It aims at being the open source computer
algebra system of choice for research, teaching, engineering, etc.
2008-08-28 20:07:51 +00:00
apb
1d015bb063 SUBDIR+- py-networkx 2008-08-27 18:54:25 +00:00
apb
c305c59d8f Add math/py-networkx package. 2008-08-27 18:53:42 +00:00
ahoka
3c0620138d Update to 5.15
Submitted by Aleksej Saushev in PR pkg/39404.


Changes since Maxima 5.15

Major changes:

 * ECL can build Maxima via autoconf machinery


Other revisions:

 * Revision and extension of code for exponential integral functions
 * Revision and extension of code for hypergeometric functions
 * share/contrib/amatrix: revisions
 * share/contrib/gf: bug fixes
 * share/contrib/sarag: revisions
 * share/contrib/zeilberger: revisions
 * share/contrib/graphs: revisions
 * share/contrib/distrib: revisions and new test script
 * share/contrib/maximaMathML: revisions
 * share/tensor: additional demonstrations
 * Patches for Lispworks and MCL
 * Revisions and extensions of reference manual and its translations

Plus various bug fixes.
2008-08-25 22:14:17 +00:00
adam
b4580806e2 Changes 4.30:
* glpspx.h, glpspx03.c, glpapi06.c
  The primal simplex solver (spx_prim_opt, spx_prim_feas) was
  replaced by a new implementation (spx_primal), which currently
  provides the same features as the old version.

* glpmpl01.c, glpmpl03.c
  Some changes were made in the MathProg translator to allow <,
  <=, >=, and > on comparing symbolic values.

* glplpx10.c
  Internal routine set_d_eps in the exact LP solver was changed
  to prevent approximation errors in case of integral data.
2008-08-20 08:19:13 +00:00
dholland
d7e204d8ba Use the PIC flag for Fortran that autoconf picks out. Fixes broken
build on amd64 and probably others.
2008-08-18 01:47:31 +00:00
dholland
5c4c0363db Use the PIC flag for Fortran that autoconf picks out. Fixes broken
build on amd64 and probably others.
2008-08-18 00:28:21 +00:00
he
8cbd9f959b Update from version 0.61nb1 to 0.63.
Pkgsrc changes:
 o Changed MAINTAINER to pkgsrc-users@ as per communication with maintainer

Upstream changes:
0.63   2008-07-21
- minor tweak in union(); added tests

0.62   2008-07-20
- fixed a problem in union() that caused first() to return a wrong result.
  reported by David Gang
2008-08-17 17:06:25 +00:00
he
129d44a2a1 Update from version 1.00nb1 to 1.02.
Pkgsrc changes:
 o Change MAINTAINER to pkgsrc-users@ as per communication with maintainer

Upstream changes:

1.02    2008-07-30

    * The 1.01 distribution tarball was broken; this is what it should
      have been.

1.01    2008-07-30

    * Relicensed on request from the old Artistic License to "the same
      terms as Perl itself" (i.e. new Artistic/GPL).

      (No functional changes.)
2008-08-17 16:57:24 +00:00
he
d67adc0bc2 Update from version 2.22 to 2.23. Changes:
2.23 August 10 2008 - Major

    + Added Excel data validation with examples and test suite.
2008-08-17 12:58:29 +00:00
bjs
cdeeca638c Update to mpfr-2.3.1. Add new distribution patch, appease pkglint.
Changes from version 2.3.0 to version 2.3.1:

- Changes in the behavior of mpfr_strtofr and in its documentation
  concerning particular cases where the code and the documentation
  did not match.
- Bug fixes; see <http://www.mpfr.org/mpfr-2.3.0/#bugs>.
- Configure test for TLS support.
- Improved MPFR manual.
2008-08-17 07:59:13 +00:00
dholland
4d2acc70fa Use -fPIC. Fixes broken build on amd64 and probably others. 2008-08-17 07:02:39 +00:00
markd
584ff28626 fix typo. 2008-08-12 21:32:26 +00:00
markd
02eaa3a918 Tell libtool that its linking fortran so the correct libraries get linked
in.
2008-08-12 21:32:04 +00:00
markd
8748e4e0ee Tell libtool that its linking fortran so the correct libraries get
linked in.
2008-08-12 21:29:11 +00:00
he
abd19aa279 Update from version 2.010709 to 2.010800. Changes:
2.010800:
	Test suite was sub()ifying argument to sumnuminit().
	Test suite would not correctly sub()ify intnum() if limits had "()".
	Test suite calculated Pi Euler too early; Now only these fail
    t/55_intnum.t               51    1   1.96%  12
    t/55_ploth.t                34    1   2.94%  4

  # eval-noans: $oo=[  PARI(1) ];
  # eval-noans: setprecision(96)
  # eval-noans: $tab=intfuncinit($t,[-$oo,4.5],[$oo,4.5], sub{gamma(2+ I*$t)**3},1);
  # eval: intmellininvshort(2,4,$tab)-$A
  not ok 12 # in='intmellininvshort(2,4,$tab)-$A'
  #    out='-0.00162288630645762090148373314245888997812239836220952087633884330352714288074453852820714919691012-6.88133524E-101*I', type='Math::Pari'
  # pari==='-3.072350108 E-97 + 9.90717831 E-100*I'
  # re_out='\-3\.072350108,?\s*E\-97,?\s*\+,?\s*9\.90717831,?\s*E\-100\*I'

	Why this succeeds?
  # eval: intnum($x,-1,1, sub{intnum($y,-sqrt(1-$x**2),sqrt(1-$x**2),$x**2+$y**2,$tab)},$tab)- Pi/2
	Actually, $x**2+$y**2 is converted to a string as in '0.09+y^2',
	 which is interpreted by GP/PARI.
	Add warnings to the test suite for detection of #@_
	 in Perl-in-PARI-in-Perl calls.
	Attempt to support v5.10 (based on code contributed by ???)
2008-07-29 12:37:50 +00:00
he
057606a58c Update from version 2.01 to 2.05.
Pkgsrc change:
 o Convert to using Module::Build.

Upstream changes:

Changes in v2.05 - leto
Fri Feb 29 21:58:47 EST 2008
----------------------------
    * fix accidental use of "our" that broke old (like 5.5) Perl's
      Thanks to srezic@cpan.org for the first FAILed report
    * added $matrix->display_precision($n) to easily change the output
      to something a bit easier to read
        $a->display_precision(0)
      is useful for printing integer matrices nicely
    * NEED print_precision() docs near stringify
    * t/display_precision.t created
    * example/ directory created with some benchmark scripts

Changes in v2.04 - leto
Sat Feb 23 20:59:08 EST 2008
---------------------------
    * fixed pod errors
    * $a->length does row+col vectors now
    * converted all tests except ext1.t to Test::More and added
      some overall Kwalitee
    * fixed error with doing $string = $matrix . "\nStuff\n";
    * new funcion new_tridiag
    * $matrix->min and $matrix->max now return the min/max element of a matrix
    * new function new_random added which looks like (with default
      options shown)

    # returns $n x $m matrix of real numbers between 0 and 10
	new_random($n,$m, { symmetric => 0, tridiag => 0, bounded_by => [0,10], integer => 0 )

	new_random($n, %options ) # returns a square matrix

      This has proven to be pretty useful in the unit tests of
      Math::MatrixReal so I figured others may want an easy way to
      generate a random matrix of your own flavor

    * t/rand.t created
    * t/tridiag.t created
    * t/stringify.t created
    * t/minimax.t created
    * t/positive.t created
    * t/gsm.t created
    * t/similar.t created

Changes in v2.03 - leto
Sun Jan 27 13:19:55 EST 2008
---------------------------
    * now using Module::Build, so Math::MatrixReal should in theory be able to
      compile on systems without make, please test and let me know!
    * new concatenation operator ".", i.e $c = $a . $b concatenates two
      matrices side-by-side
    * t/concat.t created
    * new function assign_row
    * beginning of a test suite overhaul (converting to Test::More )

Changes in v2.02 - leto
Sat Jun 09 12:29:08 EDT 2007
----------------------------
    * Fixed the overloading for the division operator which did
      not recognize $a/2, reported by Daniel Brooks <db48x@yahoo.com>
    * Added support for matrix division notation, so that $a/$b =
      $a*$b**(-1) when $a and $b are square matrices
    * t/div.t created
2008-07-29 11:45:33 +00:00
he
cd2207c4fc Update from version 2.21 to 2.22. Changes:
2.22 July 19 2008 - Minor Beta

    + Added JPEG support.

    + Added 29_process_jpg.t test for jpg dimension processing.

    + Turned off compatibility_mode() in Spreadsheet::WriteExcel::Big
      which was on by accident.

    + Added "Warning about Office Service Pack 3" section to the
      docs to explain Excel warnings with duplicate data.

    + Expanded "Dates and Time in Excel" section of the docs.

    + Added isa() to _process_images() to allow subclassing.
      Reported by David Worenklein.
2008-07-27 18:33:55 +00:00
he
6be92eecd5 Add p5-Math-Random-MT-Perl. 2008-07-26 20:10:05 +00:00
he
39a7b0fcd2 Import p5-Math-Random-MT-Perl version 1.05.
Pure Perl implementation of the Mersenne Twister algorithm as
implemented in C/XS in Math::Random::MT. The output is identical
to the C/XS version. The Mersenne Twister is a 32 bit pseudorandom
number generator developed by Makoto Matsumoto and Takuji Nishimura.
The algorithm is characterised by a very uniform distribution but
is not cryptographically secure. What this means in real terms is
that it is fine for modeling but no good for crypto.
2008-07-26 20:09:16 +00:00
dbj
545c5feef7 set --disable-R-framework and --without-aqua
these options are only used by R.app on Mac OS X
2008-07-20 23:18:28 +00:00
obache
4bcf4907f1 Update grace to 5.1.22.
Patch provided by Aleksej Saushev in PR 38884.

5.1.22
Interface
 *  [DC] mention object type when asking for user's confirmation on delete

Parser
 *  [ES] added "LINCONV(set1, set2)" command - an equivalent of
         Transformations->Linear convolution
 *  [ES] added "VOIGT(gamma, sigma, x)" function (rep. #2144)

Bug fixes
 *  [ES] in the grace_np library GraceClose() could kill all user processes
         if by that time the Grace subprocess has exited (rep. #2035)
 *  [ES] certain hand-modified settings in project files might cause the GUI
         crash (incl. rep. #2139)
 *  [ES] ungraceful closing of anonymous pipes could result in high CPU load

5.1.21

Functionality
 *  [ES] added IsoLatin5 (ISO 8859-9) encoding file
 *  [ES] now honor locale in number stringifications (rep. #2109)
 *  [ES] extended range of prefixes in the Engineering format up to 10^{+/-24}
 *  [HR] added "Computing" tick label format

Interface
 *  [ES] added "-maxpath" command line option for setting maximal drawing
         path length
 *  [ES] allow for longer legend lines

Parser
 *  [ES] added "KILL BLOCK" command (deallocates the memory of the current
         block data)

Bug fixes
 *  [ES] there was a misleading error message when attempting to redefine an
         existing variable/keyword in the parser
 *  [ES] fixed rounding-off problem with zero labels (rep. #2098)

Portability/Compilation
 *  [IG] eliminated some of gcc-4.1 warnings (rep. #2111)
 *  [IG] man page cleaned (rep. #2110)

5.1.20

Parser
 *  [ES] added SGN() function

Defaults
 *  [ES] changed default major tick spacings to 0.2

Bug fixes
 *  [ES] command argument "-graphtype pie" wasn't recognized (rep. #2058)
 *  [ES] fixed openning of help documents when using an external browser
 *  [ES] "Geometric transforms" with order: "Rotate, scale, translate" in fact
         was doing "Translate, scale, rotate"
 *  [ES] Grace might crash when using "Engineering" tick label format
         (rep. #2094)
 *  [ES] file selection dialog wasn't closed when fit parameters file was
         read in successfully

5.1.19

Functionality
 *  [ES] BARDY and BARDYDY sets are now allowed in XY graphs

Bug fixes
 *  [RL] loading a DL module could fail with an irrelevant error message
         (rep. #2071)
 *  [ES] a bug in the PS driver caused CUPS to output empty page if printing
         accounting was enabled in foomatic (rep. #2047)
 *  [ES] automatic data point purging (enabled when set length exceeds "Max
         drawing path length" in Edit/Preferences) could fail silently
         (rep. #2069)
 *  [ES] the point purging could result in wrong set filling when fill to
         the baseline was selected
 *  [ES] configure's option --with-helpviewer was broken (rep. #1414)

5.1.18

Parser
 *  [ES] implemented concatenation of quoted strings and numerical expressions

Bug fixes
 *  [ES] some X font configurations could make Grace crash (rep. #1436)
 *  [ES] DEFAULT ... commands had no effect on new drawing objects (including
         rep. #1437)
 *  [ES] DEFAULT CHAR SIZE had no effect on tick labels of new axes

5.1.17

Drivers
 *  [ES] changed default resolution of the PDF driver to 300 dpi

Documentation/Info
 *  [ES] minor documentation updates, including rep. #1421

Bug fixes
 *  [ES] with page fill disabled, the page frame line might be drawn with
         wrong properties
 *  [ES] due to a bug in the Xbae widget, when a TrueType font was used,
         several dialogs could become unusable (including rep. #1366)
 *  [ES] enabling patterned fills and PDF-1.4 compatibility mode could result
         in crash when printing to PDF

5.1.16

Interface
 *  [ES] set scrolling of the custom ticks/labels table to 1 row per
         click (rep. #1419)

Documentation/Info
 *  [ES] updates relevant to the status of mailing lists/forums

Portability/Compilation
 *  [ES] PDF driver updated to work with PDFlib-6 (rep. #1426). Minimal
         supported version is now 5.0

Drivers
 *  [ES] added option to generate PDF-1.4 format (Acrobat5). Support for
         PDF-1.2 (Acrobat3) removed

Bug fixes
 *  [ES] replaced meaningless error message issued when trying to load data
         with a few string columns as a single set
 *  [ES] in the spreadsheet editor, the last entered cell's data wasn't
         committed (rep. #1420)

5.1.15

Functionality
 *  [ES] increased max number of custom tick marks/labels to 256 per a
         popular demand

Project files
 *  [ES] now using one-line format for saving graph's world and viewport
         settings

Defaults
 *  [ES] changed default external help viewer to mozilla

Documentation/Info
 *  [ES] misc documentation updates (including rep. #1411)

Bug fixes
 *  [ES] fixed crash when number of custom tick marks/labels exceeded 100
 *  [ES] fixed evaluation of FWHM in "Feature extraction" (old version
         might produce wrong results for multi-peak data)
 *  [ES] support for loadable functions of 4 and 5 parameters, introduced
         in 5.1.14, was incomplete
 *  [ES] in correlation/covariance, only the absolute value at 0 is
         normalized to 1, so for anti-correlation the sign is preserved
2008-07-18 17:22:47 +00:00
drochner
28428ead05 update to 5.22.3
changes:
-UI fix
-translation update
2008-07-15 11:15:21 +00:00
joerg
f605fec2db Mark as destdir ready. 2008-07-14 12:55:56 +00:00
drochner
14061e604b uses decorators -> Python>=2.4 2008-06-26 15:55:18 +00:00
markd
f740336d74 Explicitly disable java support so that it doesn't try, and fail, to build
it if configure script happens to find a java installed.
2008-06-23 20:54:44 +00:00
drochner
582b419cf4 update to 1.63
changes:
-direct support for polynomial arithmetic over GF(2)
-for loop can now handle >= 2**32 iterations
-bugfixes
2008-06-23 17:55:33 +00:00
drochner
a52feffd93 update to 1.0.3
changes: Fixes, optimizations, few new functions, few improvements to GUI
2008-06-23 17:16:56 +00:00
he
eafd64a812 Update from version 2.18 to 2.21. Changes:
2.21 March 9 2008 - Major

    ! Fixed bug where UTF-8 strings in formulas weren't handled.
      Thanks Sergey Zhuravlev.
      http://rt.cpan.org/Public/Bug/Display.html?id=30368

    ! Fixed collapse outlines compatibility with Gnumeric
      and OpenOffice.org.
      Reported by Barrie Slaymaker.
      http://rt.cpan.org/Public/Bug/Display.html?id=33662

    + Added outline_collapsed.pl example.

    + Added document section about rewriting Excel files.

    + Minor security fix to Format to avoid eval and
      additional fix for RT 24218.
      Thanks to Bram.

    + Added increased compatibility with third party
      Excel reading applications such as POI.

    + Added optional compatibility_mode() to fix problems
      that can occur with Office SP3.

    + Fixed compatibility problem with Google Docs.

    + Added set_start_page() method for setting the start page
      number when printing.


2.20 October 6 2007 - Major


    + Added autofilter() and filter_column() method and
      autofilter.pl example.

    + Added embed_chart() method to allow extracted chart
      templates to be embedded in a worksheet.
      Added demo4.pl and demo5.pl examples.

    + Added the insert_image() method and proper Excel 97
      style image handling for PNG and BMP.
      Images now work with Gnumeric and OpenOffice.
      insert_bitmap() is now deprecated.

    ! Made pane split optional when calling freeze_panes().
      Also renamed thaw_panes() as split_panes(). The old
      method name is still available, but deprecated.

    ! Renamed write_unicode() and write_unicode_le() methods
      to the more explicit write_utf16be_string() and
      write_utf16le_string(). The old method names are
      still available, but deprecated.


2.19 June 14 2007 - Major

    + Beta testing only. Not released to CPAN.
2008-06-22 17:08:54 +00:00
joerg
9368f361a6 Fix build with f2c. 2008-06-21 19:31:03 +00:00
minskim
90d5abf001 Update mathomatic to 14.0.5.
Major changes since 12.8.0:
- Improved the "solve verify" command option.
- Added "derivative nosimplify" command option.
- Added "simplify sign" command option.
- More correct simplification restriction added.
- Disallow variable name "all" in expressions.
- Turned off readline file name completion.
- Implemented integral divide operator "//".
2008-06-21 17:23:26 +00:00
minskim
477c60fa06 Update ruby-rb-gsl to 1.10.3.
Major changes since 1.9.2:
* GSL-1.10 support
  * Generalized eigensystems
  * Cholesky routines to complex matrices
  * and more
* NDLINEAR extension support: multi-linear,
  multi-parameter least squares fitting
2008-06-20 15:34:33 +00:00
joerg
3b0d97b0de Add DESTDIR support. 2008-06-20 01:09:05 +00:00
taca
acb340db2a - Switch to use vendor_dir with Ruby 1.8.7.
- Compile with gsl-1.11 (and maybe later).

Bump PKGREVISION.
2008-06-19 14:51:16 +00:00
joerg
ba171a91fa Add DESTDIR support. 2008-06-12 02:14:13 +00:00