6 commits
Author | SHA1 | Message | Date | |
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mef
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48e8221587 |
(math/R-tidyr) Updated 1.1.3 to 1.2.0
# tidyr 1.2.0 ## Pivoting * `pivot_wider()` gains new `names_expand` and `id_expand` arguments for turning implicit missing factor levels and variable combinations into explicit ones. This is similar to the `drop` argument from `spread()` (#770). * `pivot_wider()` gains a new `names_vary` argument for controlling the ordering when combining `names_from` values with `values_from` column names (#839). * `pivot_wider()` gains a new `unused_fn` argument for controlling how to summarize unused columns that aren't involved in the pivoting process (#990, thanks to @mgirlich for an initial implementation). * `pivot_longer()`'s `names_transform` and `values_transform` arguments now accept a single function which will be applied to all of the columns (#1284, thanks to @smingerson for an initial implementation). * `pivot_longer()`'s `names_ptypes` and `values_ptypes` arguments now accept a single empty ptype which will be applied to all of the columns (#1284). ## Nesting * `unnest()` and `unchop()`'s `ptype` argument now accepts a single empty ptype which will be applied to all `cols` (#1284). * `unpack()` now silently skips over any non-data frame columns specified by `cols`. This matches the existing behavior of `unchop()` and `unnest()` (#1153). ## Rectangling * `unnest_wider()` and `unnest_longer()` can now unnest multiple columns at once (#740). * `unnest_longer()`'s `indices_to` and `values_to` arguments now accept a glue specification, which is useful when unnesting multiple columns. * For `hoist()`, `unnest_longer()`, and `unnest_wider()`, if a `ptype` is supplied, but that column can't be simplified, the result will be a list-of column where each element has type `ptype` (#998). * `unnest_wider()` gains a new `strict` argument which controls whether or not strict vctrs typing rules should be applied. It defaults to `FALSE` for backwards compatibility, and because it is often more useful to be lax when unnesting JSON, which doesn't always map one-to-one with R's types (#1125). * `hoist()`, `unnest_longer()`, and `unnest_wider()`'s `simplify` argument now accepts a named list of `TRUE` or `FALSE` to control simplification on a per column basis (#995). * `hoist()`, `unnest_longer()`, and `unnest_wider()`'s `transform` argument now accepts a single function which will be applied to all components (#1284). * `hoist()`, `unnest_longer()`, and `unnest_wider()`'s `ptype` argument now accepts a single empty ptype which will be applied to all components (#1284). ## Grids * `complete()` gains a new `explicit` argument for limiting `fill` to only implicit missing values. This is useful if you don't want to fill in pre-existing missing values (#1270). * `complete()` gains a grouped data frame method. This generates a more correct completed data frame when groups are involved (#396, #966). * `complete()` and `expand()` no longer allow you to complete or expand on a grouping column. This was never well-defined since completion/expansion on a grouped data frame happens "within" each group and otherwise has the potential to produce erroneous results (#1299). ## Missing values * `drop_na()`, `replace_na()`, and `fill()` have been updated to utilize vctrs. This means that you can use these functions on a wider variety of column types, including lubridate's Period types (#1094), data frame columns, and the [rcrd](https://vctrs.r-lib.org/reference/new_rcrd.html) type from vctrs. * `replace_na()` no longer allows the type of `data` to change when the replacement is applied. `replace` will now always be cast to the type of `data` before the replacement is made. For example, this means that using a replacement value of `1.5` on an integer column is no longer allowed. Similarly, replacing missing values in a list-column must now be done with `list("foo")` rather than just `"foo"`. * `replace_na()` no longer replaces empty atomic elements in list-columns (like `integer(0)`). The only value that is replaced in a list-column is `NULL` (#1168). * `drop_na()` no longer drops empty atomic elements from list-columns (like `integer(0)`). The only value that is dropped in a list-column is `NULL` (#1228). ## Bug fixes and minor improvements ### General * @mgirlich is now a tidyr author in recognition of his significant and sustained contributions. * All lazyeval variants of tidyr verbs have been soft-deprecated. Expect them to move to the defunct stage in the next minor release of tidyr (#1294). * `any_of()` and `all_of()` from tidyselect are now re-exported (#1217). * dplyr >= 1.0.0 is now required. ### Pivoting * `pivot_wider()` now gives better advice about how to identify duplicates when values are not uniquely identified (#1113). * `pivot_wider()` now throws a more informative error when `values_fn` doesn't result in a single summary value (#1238). * `pivot_wider()` and `pivot_longer()` now generate more informative errors related to name repair (#987). * `pivot_wider()` now works correctly when `values_fill` is a data frame. * `pivot_wider()` no longer accidentally retains `values_from` when pivoting a zero row data frame (#1249). * `pivot_wider()` now correctly handles the case where an id column name collides with a value from `names_from` (#1107). * `pivot_wider()` and `pivot_longer()` now both check that the spec columns `.name` and `.value` are character vectors. Additionally, the `.name` column must be unique (#1107). * `pivot_wider()`'s `names_from` and `values_from` arguments are now required if their default values of `name` and `value` don't correspond to columns in `data`. Additionally, they must identify at least 1 column in `data` (#1240). * `pivot_wider()`'s `values_fn` argument now correctly allows anonymous functions (#1114). * `pivot_wider_spec()` now works correctly with a 0-row data frame and a `spec` that doesn't identify any rows (#1250, #1252). * `pivot_longer()`'s `names_ptypes` argument is now applied after `names_transform` for consistency with the rectangling functions (i.e. `hoist()`) (#1233). * `check_pivot_spec()` is a new developer facing function for validating a pivot `spec` argument. This is only useful if you are extending `pivot_longer()` or `pivot_wider()` with new S3 methods (#1087). ### Nesting * The `nest()` generic now avoids computing on `.data`, making it more compatible with lazy tibbles (#1134). * The `.names_sep` argument of the data.frame method for `nest()` is now actually used (#1174). * `unnest()`'s `ptype` argument now works as expected (#1158). * `unpack()` no longer drops empty columns specified through `cols` (#1191). * `unpack()` now works correctly with data frame columns containing 1 row but 0 columns (#1189). * `chop()` now works correctly with data frames with 0 rows (#1206). * `chop()`'s `cols` argument is no longer optional. This matches the behavior of `cols` seen elsewhere in tidyr (#1205). * `unchop()` now respects `ptype` when unnesting a non-list column (#1211). ### Rectangling * `hoist()` no longer accidentally removes elements that have duplicated names (#1259). ### Grids * The grouped data frame methods for `complete()` and `expand()` now move the group columns to the front of the result (in addition to the columns you completed on or expanded, which were already moved to the front). This should make more intuitive sense, as you are completing or expanding "within" each group, so the group columns should be the first thing you see (#1289). * `complete()` now applies `fill` even when no columns to complete are specified (#1272). * `expand()`, `crossing()`, and `nesting()` now correctly retain `NA` values of factors (#1275). * `expand_grid()`, `expand()`, `nesting()`, and `crossing()` now silently apply name repair to automatically named inputs. This avoids a number of issues resulting from duplicate truncated names (#1116, #1221, #1092, #1037, #992). * `expand_grid()`, `expand()`, `nesting()`, and `crossing()` now allow columns from unnamed data frames to be used in expressions after that data frame was specified, like `expand_grid(tibble(x = 1), y = x)`. This is more consistent with how `tibble()` behaves. * `expand_grid()`, `expand()`, `nesting()`, and `crossing()` now work correctly with data frames containing 0 columns but >0 rows (#1189). * `expand_grid()`, `expand()`, `nesting()`, and `crossing()` now return a 1 row data frame when no inputs are supplied, which is more consistent with `prod() == 1L` and the idea that computations involving the number of combinations computed from an empty set should return 1 (#1258). ### Missing values * `drop_na()` no longer drops missing values from all columns when a tidyselect expression that results in 0 columns being selected is used (#1227). * `fill()` now treats `NaN` like any other missing value (#982). # tidyr 1.1.4 * `expand_grid()` is now about twice as fast and `pivot_wider()` is a bit faster (@mgirlich, #1130). * `unchop()` is now much faster, which propagates through to various functions, such as `unnest()`, `unnest_longer()`, `unnest_wider()`, and `separate_rows()` (@mgirlich, @DavisVaughan, #1127). * `unnest()` is now much faster (@mgirlich, @DavisVaughan, #1127). * `unnest()` no longer allows unnesting a list-col containing a mix of vector and data frame elements. Previously, this only worked by accident, and is considered an off-label usage of `unnest()` that has now become an error. |
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nia
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414fc7869d |
math: Replace RMD160 checksums with BLAKE2s checksums
All checksums have been double-checked against existing RMD160 and SHA512 hashes |
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nia
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3c576fbd23 | math: Remove SHA1 hashes for distfiles | ||
mef
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dd5419935e |
(math/R-tidyr) Updated 1.0.2 to 1.1.3
# tidyr 1.1.3 * tidyr verbs no longer have "default" methods for lazyeval fallbacks. This means that you'll get clearer error messages (#1036). * `uncount()` error for non-integer weights and gives a clearer error message for negative weights (@mgirlich, #1069). * You can once again unnest dates (#1021, #1089). * `pivot_wider()` works with data.table and empty key variables (@mgirlich, #1066). * `separate_rows()` works for factor columns (@mgirlich, #1058). # tidyr 1.1.2 * `separate_rows()` returns to 1.1.0 behaviour for empty strings (@rjpatm, #1014). # tidyr 1.1.1 * New tidyr logo! * stringi dependency has been removed; this was a substantial dependency that make tidyr hard to compile in resource constrained environments (@rjpat, #936). * Replace Rcpp with cpp11. See <https://cpp11.r-lib.org/articles/motivations.html> for reasons why. # tidyr 1.1.0 ## General features * `pivot_longer()`, `hoist()`, `unnest_wider()`, and `unnest_longer()` gain new `transform` arguments; these allow you to transform values "in flight". They are partly needed because vctrs coercion rules have become stricter, but they give you greater flexibility than was available previously (#921). * Arguments that use tidy selection syntax are now clearly documented and have been updated to use tidyselect 1.1.0 (#872). ## Pivoting improvements * Both `pivot_wider()` and `pivot_longer()` are considerably more performant, thanks largely to improvements in the underlying vctrs code (#790, @DavisVaughan). * `pivot_longer()` now supports `names_to = character()` which prevents the name column from being created (#961). ```{r} df <- tibble(id = 1:3, x_1 = 1:3, x_2 = 4:6) df %>% pivot_longer(-id, names_to = character()) ``` * `pivot_longer()` no longer creates a `.copy` variable in the presence of duplicate column names. This makes it more consistent with the handling of non-unique specs. * `pivot_longer()` automatically disambiguates non-unique ouputs, which can occur when the input variables include some additional component that you don't care about and want to discard (#792, #793). ```{r} df <- tibble(id = 1:3, x_1 = 1:3, x_2 = 4:6) df %>% pivot_longer(-id, names_pattern = "(.)_.") df %>% pivot_longer(-id, names_sep = "_", names_to = c("name", NA)) df %>% pivot_longer(-id, names_sep = "_", names_to = c(".value", NA)) ``` * `pivot_wider()` gains a `names_sort` argument which allows you to sort column names in order. The default, `FALSE`, orders columms by their first appearance (#839). In a future version, I'll consider changing the default to `TRUE`. * `pivot_wider()` gains a `names_glue` argument that allows you to construct output column names with a glue specification. * `pivot_wider()` arguments `values_fn` and `values_fill` can now be single values; you now only need to use a named list if you want to use different values for different value columns (#739, #746). They also get improved errors if they're not of the expected type. ## Rectangling * `hoist()` now automatically names pluckers that are a single string (#837). It error if you use duplicated column names (@mgirlich, #834), and now uses `rlang::list2()` behind the scenes (which means that you can now use `!!!` and `:=`) (#801). * `unnest_longer()`, `unnest_wider()`, and `hoist()` do a better job simplifying list-cols. They no longer add unneeded `unspecified()` when the result is still a list (#806), and work when the list contains non-vectors (#810, #848). * `unnest_wider(names_sep = "")` now provides default names for unnamed inputs, suppressing the many previous name repair messages (#742). ## Nesting * `pack()` and `nest()` gains a `.names_sep` argument allows you to strip outer names from inner names, in symmetrical way to how the same argument to `unpack()` and `unnest()` combines inner and outer names (#795, #797). * `unnest_wider()` and `unnest_longer()` can now unnest `list_of` columns. This is important for unnesting columns created from `nest()` and with `pivot_wider()`, which will create `list_of` columns if the id columns are non-unique (#741). ## Bug fixes and minor improvements * `chop()` now creates list-columns of class `vctrs::list_of()`. This helps keep track of the type in case the chopped data frame is empty, allowing `unchop()` to reconstitute a data frame with the correct number and types of column even when there are no observations. * `drop_na()` now preserves attributes of unclassed vectors (#905). * `expand()`, `expand_grid()`, `crossing()`, and `nesting()` once again evaluate their inputs iteratively, so you can refer to freshly created columns, e.g. `crossing(x = seq(-2, 2), y = x)` (#820). * `expand()`, `expand_grid()`, `crossing()`, and `nesting()` gain a `.name_repair` giving you control over their name repair strategy (@jeffreypullin, #798). * `extract()` lets you use `NA` in `into`, as documented (#793). * `extract()`, `separate()`, `hoist()`, `unnest_longer()`, and `unnest_wider()` give a better error message if `col` is missing (#805). * `pack()`'s first argument is now `.data` instead of `data` (#759). * `pivot_longer()` now errors if `values_to` is not a length-1 character vector (#949). * `pivot_longer()` and `pivot_wider()` are now generic so implementations can be provided for objects other than data frames (#800). * `pivot_wider()` can now pivot data frame columns (#926) * `unite(na.rm = TRUE)` now works for all types of variable, not just character vectors (#765). * `unnest_wider()` gives a better error message if you attempt to unnest multiple columns (#740). * `unnest_auto()` works when the input data contains a column called `col` (#959). |
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brook
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94d4fd6221 |
R-tidyr: update from 0.8.3 to 1.0.2.
Many changes are identified for the update to 1.0.0; see News.md for details. Apparently, these include some breaking changes. See `vignette("in-packages")` for a detailed transition guide. |
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brook
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3ec059035a |
R-tidyr: initial commit
An evolution of 'reshape2'. It's designed specifically for data tidying (not general reshaping or aggregating) and works well with 'dplyr' data pipelines. |