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2741 commits

Author SHA1 Message Date
sno
21d44bec85 Updating math/p5-Spreadsheet-ParseExcel from 0.5700nb1 to 0.5800
Upstream changes:
0.58 September 17 2010
    ! Fix for text cells formatted with a leading apostrophe.
      http://rt.cpan.org/Public/Bug/Display.html?id=61299
    ! Documentation fixes. Thanks to Dan Dascalescu
      Fix RT #61320 (typos)
      http://rt.cpan.org/Public/Bug/Display.html?id=61320
    ! Fix for currency locales in format strings.
      Reported by wjaguar.
      http://rt.cpan.org/Public/Bug/Display.html?id=60547
    ! Fix for incomplete SETUP records.
      Reported by M.C. Deurloo.
2010-09-23 06:37:46 +00:00
obache
b94e875b03 This package have nothing to buildlink3. 2010-09-20 11:04:44 +00:00
obache
88299d9753 Update py-ephem to 3.7.3.4.
Based on PR#43737 by Kamel Derouiche.

remove RESTRICTION, because COPYING file said GPL or LGPL, nothing for others.

PyEphem CHANGELOG
=================

Version 3.7.3.4 (2009 April 30)
-------------------------------

- Added a new ``next_pass()`` method to ``Observer`` that searches for
  when a satellite next rises, culminates, and sets.

- Added a ``compute_pressure()`` method to ``Observer`` which computes
  the standard atmospheric pressure at the observer's current elevation.
  This function now gets called automatically on new ``city()`` objects
  before they are returned to the user.

- Corrected the altitude of San Francisco as returned by ``city()``.

- Improved the copyright message so that two more authors are credited.

Version 3.7.3.3 (2008 October 3)
--------------------------------

- Added ``cmsI`` and ``cmsII`` attributes to ``Jupiter`` to provide the
  central meridian longitude in both System I and System II.

- **Bugfix**: Saturn was returning the wrong values for its earthward
    and sunward angle tilt.

Version 3.7.3.2 (2008 July 2)
-----------------------------

- **Bugfix**: the rising and setting functions, if called repeatedly,
  would sometimes get hung up on a single answer which they would return
  over and over again instead of progressing to the next rising or
  setting.  They should now always progress instead of getting stuck.

Version 3.7.3.1 (2008 July 1)
-----------------------------

- **Bugfix**: the rising and setting functions were attempting to
  achieve such high precision that users sometimes found circumstances
  under which they would not complete at all!  They now stop and return
  an answer once they are withing a half-second of the real time of
  rising, transit, or setting, which solves the problem without damaging
  the quality of the results when tested against the Naval Observatory.

- Upgraded to the libastro from XEphem 3.7.3.

Version 3.7.2.4 (2008 June 12)
------------------------------

- **Incompatible Change**: After feedback from users, I have changed
  the ``Observer`` methods which find risings, settings, and transits,
  so that they do not change their Observer's ``.date`` attribute.  So
  the sequence:

  .. code-block:: python

     r1 = boston.next_rising(mars)
     r2 = boston.next_rising(mars)

  now computes the same value twice!  If you want a series of calls to
  each begin when the other left off, you can use the ``start=``
  parameter described in the next item:

  .. code-block:: python

     r1 = boston.next_rising(mars)
     r2 = boston.next_rising(mars, start=r1)

- Added an optional ``start=`` argument to the rising, setting, and
  transit ``Observer`` functions, that tells them from which date and
  time to begin their search.

- **Bugfix**: Rewrote planetary moon routines so that moons of Mars,
  Jupiter, Saturn, and Uranus now return appropriate data for years
  1999-2020.  (Each moon had been returning the unmodified position of
  its planet, because I was unsure whether I could distribute the moon
  data with PyEphem.)

- You can no longer create arbitrary attributes on an ``Observer``, to
  prevent users from accidentially saying things like
  ``here.longitude`` or ``here.lon`` when they mean ``here.long``.
  Create your own subclass of ``Observer`` if you need the power to
  set your own attributes.

- The ephem module now provides a ``__version__`` symbol.

- Added test suite that tests planet and planet moon positions
  against JPL ephemeris data (needs more work).

Version 3.7.2.3 (2008 January 8)
--------------------------------

- Three new classes ``Equatorial``, ``Ecliptic``, and ``Galactic``
  allow coordinates to be transformed between the three systems
  (ability to transform coordinates was requested by Aaron Parsons).

- Added constants for popular epochs ``B1900``, ``B1950``, and
  ``J2000``.

- Added named functions for every solstice and equinox (before, only
  the vernal equinox could be asked for specifically).

- Product tests have been moved inside of the ``ephem`` module itself,
  and can now be invoked simply by running:

  .. code-block:: bash

     $ python setup.py test

- **Bugfix**: ``Angle()`` can no longer be directly instantiated.

- **Bugfix**: San Francisco had the wrong coordinates in the cities
  database (pointed out by Randolph Bentson).

Version 3.7.2.2 (2007 December 9)
---------------------------------

- The phases of the moon can now be determined through the functions
  ``next_new_moon()``, ``next_full_moon()``, ``previous_new_moon()``,
  et cetera.

- Added a modest database of world cities; the ``city()`` function
  returns a new Observer on each call:

  .. code-block:: python

     observer = ephem.city('Boston')

- Using the old ``rise``, ``set``, and ``transit`` attributes on
  ``Body`` objects now causes a deprecation warning.

- **Bugfix**: the last release of PyEphem omitted the constants
  ``meters_per_au``, ``earth_radius``, ``moon_radius``, and
  ``sun_radius``; the constant ``c`` (the speed of light) is also now
  available.

Version 3.7.2.1 (2007 October 1)
--------------------------------

- Functions now exist to find equinoxes and solstices.

- Bodies now cleanly offer three different versions of their
  position, rather than making the user remember obscure rules for
  having each of these three values computed:

  * Astrometric geocetric right ascension and declination
  * Apparent geocentric right ascension and declination
  * Apparent topocentric right ascension and declination

- Bodies can now find their next or previous times of transit,
  anti-transit, rising, and setting.

- A ``localtime()`` function can convert PyEphem ``Date`` objects to
  local time.

- Now ``ephem.angle`` instances can survive unary ``+`` and ``-``
  without getting changed into plain floats.

- The ``elev`` Observer attribute has been renamed to ``elevation``.

- Observers now display useful information when printed.

- Added a much more extensive test suite, which, among other things,
  now compares results with the United States Naval Observatory,
  insisting upon arcsecond agreement.

- **Bugfix**: When a fixed body is repeatedly precessed to different
  dates, its original position will no longer accumulate error.

Version 3.7.2a (2007 June)
--------------------------

- Upgraded to the libastro from XEphem 3.7.2.

- Should now compile under Windows!

- **Bugfix**: rewrote date-and-time parsing to avoid the use of
  ``sscanf()``, which was breaking under Windows and requiring the
  insertion of a leading space to succeed.

- Improved the error returned when a date string cannot be parsed,
  so that it now quotes the objectionable string (so you can tell
  which of several date strings on the same line gave an error!).
2010-09-20 09:52:14 +00:00
markd
ec94c406e1 Update to ess 5.11
3.5 years worth of bug fixes/changes.
2010-09-15 08:46:21 +00:00
wiz
5310bb3326 More PKGREVISION bumps for pixman update. 2010-09-14 11:13:10 +00:00
wiz
2c6e8e30b0 Bump dependency on pixman to 0.18.4 because cairo-1.10 needs that
version, and bump all depends.

Per discussion on pkgsrc-changes.
2010-09-14 11:00:44 +00:00
wiz
4ec07e7ac6 Update to 1.10.10; collect goffice0.8 dependency information in one
variable to avoid unnecessary changes to PLIST for every update.

Gnumeric 1.10.10

Andreas:
	* Significantly improve chart export and import to/from ODF.
	* Improve handling of corrupted ODF files.
	* Fix percentage style import from ODF. [#627517]
	* Fix INTERPOLATION documentation. [#627461]
	* Provide progress info in ODF export.
	* Improve warnings dialog in ODF import.
	* Fix button sensitivity in sort dialog.

Jean:
	* Fix some interpolation and periodogram issues.
	* Fixed graph scalar data editor behavior. [#628721]

Morten:
	* Plug sylk importer leak.
	* Plug xml importer leak.
	* Plug odf importer leak.  [#627759]
	* Extend domain of IMPOWER.  [#627775]
	* Allow use of glib's memory profiler.
	* Fix some confusion of char vs. xmlChar.
	* Fix elapsed-time entry.  [#628082]
	* Fix problems with limits for date axes.
	* Improve function docs self test.
	* Fix errors in function docs.
2010-09-13 10:59:52 +00:00
wiz
324db2298d Update to 3.0200:
3.0200      June 18, 2010
    - Added skewness and kurtosis
        - https://rt.cpan.org/Ticket/Display.html?id=58187
        - Thanks to Shawn Laffan.

3.0102      June 15, 2010
    - Add the $VERSION variable to Statistics::Descriptive::Sparse and
    Statistics::Descriptive::Full. This was done to silence the CPAN indexer.

3.0101      June 15, 2010
    - Moved the trimmed_mean caching test (that used the Benchmark.pm module)
    to rejects/descr.t , because it kept failing.
2010-09-12 12:28:16 +00:00
wiz
6555cbde88 Update to 0.13-withoutworldwriteables, and call it 0.13nb1.
0.13  Sun May 16 13:08:12 MSD 2010

	- ability to read xlsx from filehandle (RT #57483, thanks Sergey Pushkin)
2010-09-12 12:27:08 +00:00
taca
df4aeb4450 Remove redundant PKGNAME. 2010-09-10 07:19:18 +00:00
sno
1e80a4c17d Added math/p5-Math-Random-MT 2010-09-09 05:39:25 +00:00
sno
df508420df Importing package for p5 module Math::Random::MT version 1.11 into
math/p5-Math-Random-MT.

The Mersenne Twister is a pseudorandom number generator developed by
Makoto Matsumoto and Takuji Nishimura. It is described in their paper at
<URL:http://www.math.keio.ac.jp/~nisimura/random/doc/mt.ps>.
2010-09-09 05:37:18 +00:00
wiz
0810da9be5 Update to 1.03, set LICENSE.
1.03    2010-05-08

    * Return list elements in sorted order.
2010-09-06 11:01:20 +00:00
drochner
99330de018 add a "test" target 2010-09-01 10:54:31 +00:00
asau
63940adf8c Update to Mathomatic 15.2.0
CHANGES MADE TO MATHOMATIC 15.2.0 TO BRING IT UP TO THE NEXT VERSION:

All makefiles were improved.  Library test/example program is renamed to "testmain".

Package maintainers please take note: support for the DESTDIR environment variable was
added to the makefiles; for proper operation when packaging version 15.2.1 or higher,
please remove any patches for missing DESTDIR support.
m4 Mathomatic should work now when included in the Mathomatic package (make m4install).
Thank you for packaging Mathomatic!  If I did anything wrong, please let me know.

8/26/10 - Added the -e option, which processes mathematical expressions and Mathomatic commands
          instead of input files on the shell command line.  For example, entering
          "mathomatic -eq 2+3" gives "answer = 5".  This functionality has been requested
          many times by Mathomatic command line users.  A complete example:


CHANGES MADE TO MATHOMATIC 15.1.6 TO BRING IT UP TO THE NEXT VERSION:

Minor improvements were made to the user documentation.

8/22/10 - Removed "Complex number roots approximated" warning message, since this happens often.

          Capitalized E, I, PI, and Pi are now accepted as the universal constants e, i, and pi,
          without needing to enter "set no case".  This allows Mathomatic to easily
          accept Mathematica style expression input.

          m4 Mathomatic now additionally accepts Mathematica style capitalized function input.
          matho and rmath now display elapsed, CPU, and system times in seconds upon exit.

8/23/10 - Fixed #equation-number entry at the main prompt to always work and allow an expression
          or equation following on the same line to be entered at that equation space.
          For example: "#10 y=1/x" will work now;
          previously only worked if equation space number 10 was previously allocated and used.
          The way it works is: all equation spaces up to and including number 10 are allocated,
          if not already allocated, upon entry of "#10".
          Equations spaces are allocated with the memory allocator malloc(3).


CHANGES MADE TO MATHOMATIC 15.1.5 TO BRING IT UP TO THE NEXT VERSION:

7/26/10 - Disabled ncurses call for auto-color detection when CYGWIN is defined while
          compiling the source code, due to a reported problem of readline failing with
          ncurses in Cygwin.

7/28/10 - Disabled readline history save file for the Cygwin port,
          because it is a filename that starts with a period.

7/31/10 - Added "set fractions_display" option, to allow disabling the automatic conversion of
          fractions like .5 to 1/2 for display.
          Developer requested and useful in the symbolic math library,
          when numerical fraction output isn't wanted.

8/01/10 - Fixed a memory leak when ignoring the output string in the symbolic math library.

8/04/10 - Preserve overflowed powers like 2^2222 rather than aborting with an error message.
          Allow simplification of math like 2*2^2222 and 2/2^2222.

8/08/10 - matho-primes runs twice as fast with the -ffast-math gcc compilation option,
          which is now enabled by default.  Don't try -ffast-math with the main Mathomatic
          program though, because then Mathomatic won't work properly.


CHANGES MADE TO MATHOMATIC 15.1.4 TO BRING IT UP TO THE NEXT VERSION:

Many minor tweaks and improvements.

7/03/10 - Makefiles and compile scripts were corrected and enhanced
          per http://www.gnu.org/prep/standards/

7/06/10 - Changed all "#if true" and "#if false" conditional commenting to "#if 1" and "#if 0"
          in the C source code, thanks to Min Sik Kim of NetBSD pkgsrc.


CHANGES MADE TO MATHOMATIC 15.1.3 TO BRING IT UP TO THE NEXT VERSION:

All of the Unix man pages and user manuals for Mathomatic were fixed.

The compare and "solve verify" commands now simplify more thoroughly with "repeat simplify"
for better expression equality determination.

6/17/10 - Greatly improved file operation error reporting by using the perror(3) function.

6/18/10 - Fixed categories in "icons/mathomatic.desktop";
          Mathomatic now goes under valid categories, mainly Education.


CHANGES MADE TO MATHOMATIC 15.1.2 TO BRING IT UP TO THE NEXT VERSION:

6/6/10 - I made mistakes in the improvement to the simplify command of version 15.1.2,
         the original working simplify logic of version 15.1.1 is now restored, sorry.


CHANGES MADE TO MATHOMATIC 15.1.1 TO BRING IT UP TO THE NEXT VERSION:

A general cleanup was done.
A small improvement was made to the final result of the simplify and fraction commands.
Showing intermediate results in the calculate, sum, and product commands is now done with "set debug 1".

5/28/10 - Added "tests/collatz.in", the Collatz conjecture as an automatically computable equation.


CHANGES MADE TO MATHOMATIC 15.1.0 TO BRING IT UP TO THE NEXT VERSION:

Code and documentation cleanup.

5/21/10 - Added "primes/matho-sum", a utility that sums its command line arguments or standard input.
          Use "matho-primes 0 2000000 | matho-sum" to find the sum of all primes less than 2,000,000.
          Solves Project Euler problem #10: http://projecteuler.net/index.php?section=problems&id=10

5/23/10 - Primes (') are allowed in variable names now, if not using the symbolic math library, so that the
          derivative, integrate, and nintegrate commands can change the dependent variable to y', y'', etc.
          This can be turned on in the symbolic math library by the command "set special_variable_characters='".

          Non-alphanumeric characters in variable names are now converted to underline characters (_)
          when exporting to a programming language or to a different program.


CHANGES MADE TO MATHOMATIC 15.0.8 TO BRING IT UP TO THE NEXT VERSION:

5/10/10 - Added "help constants" command.

5/11/10 - Integer variables are now specified by using a variable name that starts with "integer",
          like "integer1", "integer_x", etc.  Currently only the modulus operator "%" checks
          for integer variables, to help with simplification.

5/12/10 - Corrected the output string type of the symbolic math library API.  It was erroneously declared
          as type "const", possibly causing a memory leak.

5/13/10 - Moved and adapted "makefile.lib" to "lib/makefile", so the symbolic math library build is isolated.
          Previously "make clean" was required between different builds.  All makefiles require GNU make now.


CHANGES MADE TO MATHOMATIC 15.0.7 TO BRING IT UP TO THE NEXT VERSION:


4/26/10 - Allow "make pdf" to generate PDF documentation from the HTML documentation with htmldoc.
          Please read the comments in the makefile for all available options.

4/29/10 - For every makefile, CFLAGS has been modified to include OPTFLAGS as required by the Fedora Linux
          build system, and OPTFLAGS defaults to the optional gcc specific flags like optimization.

          In the symbolic math library, made available the equation number of the result of calling the API,
          if also stored in an equation space.  The result equation number is stored in the global "result_en".
          Useful if you want to know where the result was stored, to act on it with further commands.


CHANGES MADE TO MATHOMATIC 15.0.6 TO BRING IT UP TO THE NEXT VERSION:

Corrections and improvements to the documentation were made.

4/3/10 - Vastly improved the "factor number" user interface, now factors integer expressions like 2^32-1.
         "factor number" is disabled in library mode.

4/13/10 - The real and imaginary commands no longer fail when the expression is not complex,
          just a warning is given.

4/14/10 - Changed normal display of "-1*" to "-", for prettier 2D expression output,
          so things like "-a" display properly, not as "-1*a".


CHANGES MADE TO MATHOMATIC 15.0.5:

1/28/10 - Added a Python utility called "primorial" to the Prime Number Tools install
          that multiplies together the results of matho-primes, displaying the primorials
          of the integers given on the command line.

3/18/10 - Changed author email address to "gesslein@linux.com".

3/23/10 - Catch SIGHUP and SIGTERM signals for proper termination of the Mathomatic program;
          readline was messing up when Mathomatic was terminated by closing the shell window.
          The plot command now always plots expressions with grid marks displayed for reference.


CHANGES MADE TO MATHOMATIC 15.0.4:

1/21/10 - In the makefile, changed the HTML man page generator back to rman because
          groff HTML output looks really bad and rman allows linking to other man pages.
          groff is no longer used.

1/24/10 - Fixed "make m4install", the installed rmath and matho programs weren't working.

1/27/10 - Added GNU LGPL license notices to every C source file with a copyright notice,
          for proper protections.


CHANGES MADE TO MATHOMATIC 15.0.3:

1/9/10 - Fixed a problem only in the version 15.0.3 makefile, where it didn't respect
         the CC environment variable set by the user, instead it always used "gcc"
         as the C compiler.


CHANGES MADE TO MATHOMATIC 15.0.2:

12/27/09 - Moved get_screen_size() from main.c to am.c because it is used in the library when
           compile-time options UNIX or CYGWIN are defined.
           Thanks to Cygwin port maintainer Reini Urban for noticing and fixing this problem.
           Defining UNIX or CYGWIN in library mode is not recommended.

12/31/09 - Added code to allow any command to be preceded by "repeat", which sets the
           repeat flag for the following command.  Most commands ignore the repeat flag.

1/1/10 - Ported divide and roots commands to be repeatable.  Also repeatable are the
         calculate and eliminate commands.

1/2/10 - Allow Taylor series computation even if the specified differentiation variable
         is not found in the expression, giving a warning.
         Ported simplify command to be a repeatable full simplify; that is, typing
         "repeat simplify" repeatedly runs the simplify command until the result stabilizes
         to the smallest size expression.

1/7/10 - Thanks to pretty C code submitted by Simon Geard,
         the code and variables commands have been made much more readable.

1/8/10 - Made Mathomatic easier to compile under Solaris, thanks to Michael Pogue of Sun.
         Fixed failure to compile under BSD Unix when compiling with readline support.


CHANGES MADE TO MATHOMATIC 15.0.1:

12/19/09 - The last few versions fix the ugliness caused by the GCD factoring change made on 6/22/09.
           Today's change factors out the numerical GCD of rational coefficients as needed to simplify.
           Most simplification results should be beautiful and the simplest possible again now,
           without the misleading observed magnitude caused by always factoring out the GCD,
           which was why the change of 6/22/09 was made.


CHANGES MADE TO MATHOMATIC 15.0.0:

12/12/09 - Fixed a problem with the -q (quiet mode) option being ignored if the session options
           were ever saved with the "set save" command.

12/13/09 - Added code to allow Mathomatic output to be redirected by default.
           Fixed the derivative command to be successful even when the result is 0,
           when compiled as a library.

12/14/09 - Added ability to log symbolic math library results, and made command behavior
           more consistent in the library by always returning the final result string.

12/16/09 - The factor command now factors more by factoring out the GCD of rational coefficients.


CHANGES MADE TO MATHOMATIC 14.6.3 TO BRING IT UP TO 15.0.0:

Cleanup and more bug fixes.

11/26/09 - Added detection of the terminal's ANSI color availability, when readline is enabled.

11/28/09 - Added detection of divide by zero and NaN when using the "solve verify" command,
           for more correct results.
           Solving now factors out the GCD of rational coefficients, for improved results.
           The fixes today are from errors solving equations like (2*x/(x - 3)) + 3 = 6/(x - 3)

11/29/09 - Disallow the variable named "nan".  NaN cannot be directly entered into Mathomatic.

11/30/09 - Added shell scripts "t" and "tests/t" to easily test Mathomatic by typing "./t".

12/2/09 - The fraction command now factors out the GCD of rational coefficients like the
          solve command does, so that coefficients in algebraic fractions become integers.
          The GCD verifying routine was perfected by making it very strict, like it should be.
2010-08-30 02:48:40 +00:00
gls
3050f7c16a Update math/py-networkx to 1.2.
From PR pkg/43790 by Kamel Derouiche

pkgsrc changes:
- re-set LICENSE (modified-bsd).

upstream changes:

Networkx-1.2

Release date: 28 July 2010

See: https://networkx.lanl.gov/trac/timeline
New features

        * Ford-Fulkerson max flow and min cut
        * Closness vitality
        * Eulerian circuits
        * Functions for isolates
        * Simpler s_max generator
        * Compatible with IronPython-2.6
        * Improved testing functionality: import networkx; networkx.test() tests
 entire package and skips tests with missing optional packages
        * All tests work with Python-2.4
        * and more, see
https://networkx.lanl.gov/trac/query?status=closed&group=milestone&milestone=networkx-1.2

Networkx-1.1

Release date: 21 April 2010

See: https://networkx.lanl.gov/trac/timeline
New features

        * Algorithm for finding a basis for graph cycles
        * Blockmodeling
        * Assortativity and mixing matrices
        * in-degree and out-degree centrality
        * Attracting components and condensation.
        * Weakly connected components
        * Simpler interface to shortest path algorithms
        * Edgelist format to read and write data with attributes
        * Attribute matrices
        * GML reader for nested attributes
        * Current-flow (random walk) betweenness and closeness.
        * Directed configuration model, and directed random graph model.
        * Improved documentation of drawing, shortest paths, and other
 algorithms
        * Many more tests, can be run with ?import networkx; networkx.test()?
        * and much more, see
https://networkx.lanl.gov/trac/query?status=closed&group=milestone&milestone=networkx-1.1

API Changes
Returning dictionaries

Several of the algorithms and the degree() method now return dictionaries keyed
by node instead of lists. In some cases there was a with_labels keyword which is
no longer necessary. For example,

>>> G=nx.Graph()
>>> G.add_edge('a','b')
>>> G.degree() # returns dictionary of degree keyed by node
{'a': 1, 'b': 1}

Asking for the degree of a single node still returns a single number

>>> G.degree('a')
1

The following now return dictionaries by default (instead of lists) and the
with_labels keyword has been removed:

        * Graph.degree(), MultiGraph.degree(), DiGraph.degree(),
DiGraph.in_degree(), DiGraph.out_degree(), MultiDiGraph.degree(),
MultiDiGraph.in_degree(), MultiDiGraph.out_degree().
        * clustering(), triangles()
        * node_clique_number(), number_of_cliques(), cliques_containing_node()
        * eccentricity()

The following now return dictionaries by default (instead of lists)

        * pagerank()
        * hits()

Adding nodes

add_nodes_from now accepts (node,attrdict) two-tuples

>>> G=nx.Graph()
>>> G.add_nodes_from([(1,{'color':'red'})])

Examples

        * Mayvi2 drawing
        * Blockmodel
        * Sampson?s monastery
        * Ego graph

Bug fixes

        * Support graph attributes with union, intersection, and other graph
operations
        * Improve subgraph speed (and related algorithms such as
connected_components_subgraphs())
        * Handle multigraphs in more operators (e.g. union)
        * Handle double-quoted labels with pydot
        * Normalize betweeness_centrality for undirected graphs correctly
        * Normalize eigenvector_centrality by l2 norm
        * read_gml() now returns multigraphs
2010-08-27 03:09:18 +00:00
asau
ef490fc0bb Update to Maxima 5.22.1
Changes in Maxima 5.22.1

   New items in core:

 * function gensym: new
 * function makelist: extensions


   Other revisions in core:

 * improvements in specint (Laplace transform)
 * improvements in Xmaxima user interface
 * inverse properties for erf and friends
 * function transpose: faster algorithm


   Other revisions in share:

 * package graphs: new graph definitions, tutte and flow polynomials, bug fixes, other updates
 * package draw: new object geomap, rename mesh to elevation_grid, other updates
 * package descriptive: new functions smin, smax; functions mini, maxi now deprecated
 * package simplify_sum: try to detect telescoping sums
 * package ezunits: additional conversions, faster conversion algorithm
 * package lapack: new function dgesv
 * package colnew: improved interface functions
 * package dynamics: bug fix
 * package mnewton: bug fix
 * package finance: update


   Bug fixes:

   3035313 - some array references translated incorrectly
   3029610 - integrate and %e_to_numlog
   3025038 - gruntz needs logexpand:true
   3024797 - @POSIX_SHELL@ always substitued by /bin/sh in configure.lisp
   3014545 - submatrix does not work as expected
   3012427 - tex2ooo.lisp invalid output
   3010829 - numerical evaluation of elliptic_ec fails for argument > 1
   3010525 - abs documentation doesn't explain mapping behavior
   3009011 - plot3d syntax
   3007061 - log(x^2) simplifies to 2 log(x) for all x
   3005820 - full_listify
   3002971 - limit fails where rat+subst works
   2999635 - trigrat(sin(1)) makes mess
   2998621 - conjugate(atan(x+%i*y)) wrong
   2997276 - zeta(3),numer; gives Lisp error
   2996542 - log(x) integration is incorrect.
   2996106 - at(diff(f(x,y),x,1,y,1),[x=a,y=b]) is wrong
   2996065 - Unevaluated numerical hypergeometric() call
   2992398 - sort doesn't give error for invalid comparison
   2991924 - Incorrect integration of rational functions
   2990307 - error for solve_rat_ineq
   2988544 - integrate(signum(abs(x)),x,-2,2);
   2988190 - atan2(1b20,-1b0); badly wrong
   2985866 - derivatives of functions of taylor polys
   2933097 - polyfactor not documented
   2905526 - lcm(0,6,0) --> divide by zero
   2806446 - ev_diff in vect.mac
   2805600 - depends() partially prevents diff() to work
   2789110 - solve, tan and atan depend on order of variables
   2784283 - psi[0](negative float)
   2781127 - bfpsi0 of complex
   2556133 - "at" should do parallel substitutions
   2036462 - Very long calculation time, normal ?
   2014941 - compositions of 'at'
   2011228 - vect redefines "." as commutative, was:Matrix multiplication
   1994295 - errormsg
   1961494 - translated functions & values list
   1959214 - integrate() and array having lisp style name
   1928142 - keepfloat breaks ratsubst() in some cases
   1758005 - compiler warning for rat3c
   1677217 - composistions of 'at'
   1663385 - declare multiplicative - wrong simplification
   1281740 - declare/featurep - strange behaviour
   1212598 - bug in the VECT.MAK - VECTORSIMP cross product
   1117533 - letsimp complains about assignment to %pi
   1114128 - 2nd argument in permanent
   1078046 - Alias atoms displayed after unorder()
   1046653 - input prompt appearing when it should not
   1003494 - scalefactors broken Maxima 5.9.0 (win)
    947808 - logcontract and ratfac
    838301  - vect negate cross product simplification
    754220 - Featurep and Declare inconsistent /FIX
    742909 - trigrat(sin(x/2)) makes a mess
   unnumbered - is(f("x")>0) causes an error.
2010-08-26 10:21:12 +00:00
wiz
4d31d2dc4f Fix packaging with latest goffice. Bump PKGREVISION. 2010-08-23 13:33:36 +00:00
seb
febfbb41f9 Bump the PKGREVISION for all packages which depend directly on perl,
to trigger/signal a rebuild for the transition 5.10.1 -> 5.12.1.

The list of packages is computed by finding all packages which end
up having either of PERL5_USE_PACKLIST, BUILDLINK_API_DEPENDS.perl,
or PERL5_PACKLIST defined in their make setup (tested via
"make show-vars VARNAMES=..."), minus the packages updated after
the perl package update.

sno@ was right after all, obache@ kindly asked and he@ led the
way. Thanks!
2010-08-21 16:32:42 +00:00
wiz
480e1007a5 Simplify pattern. 2010-08-20 00:32:48 +00:00
wiz
5aae3c6f57 Fix pattern to allow goffice-0.8.9 and newer. 2010-08-20 00:32:29 +00:00
asau
1a8b31e34b GNU make fallout: it has become stricter wrt tabulation. 2010-08-18 17:40:31 +00:00
wiz
77e94bf399 Update to 1.10.9, set LICENSE, remove "(development version)" from
COMMENT.

Changes:

Andreas:
	* Clarify autofilter dialog. [#625688]
	* Make the tooltips theme-independent. [#625966]
	* Adjust and fix WORKDAY and NETWORKDAY.
	* Fix crash on certain handcrafted ODF files. [#626632]
	* Fix import of some ODF 1.0 charts. [#626632]
	* Fix crash on paste into an empty expression entry. [#626648]
	* Import and export boxplots to and from ODF files. [#626653]
	* Improve handling of corrupted ODF files. [#626654][#626655]
	* Fix autocorrection when entering in ranges. [#626781]
	* Fix column wdth and row height adjustments when entering in ranges.
	  [#626789]
	* Fix autofitting on data entry. [#626861]
	* Avoid some of the multiple undos when entering existing text in
	  ranges. [#626797]
	* Adjust formats when autofitting new entries. [#626903]
	* Autofit rows and columns when entering an array expression. [#626904]
	* Fix column and row fitting on paste. [#359404][#611181]
	* Export images to ODF.
	* Fix import of graphs from rich ODF files. [#626961]
	* Some ring and pie plot ODF export improvements.

Jean:
	* Import Guppi graphs from gnumeric-1.0.x files. [#567953]
	* Survive malformed guppi graphs. [#625726]
	* Use theme foreground color for row and column headers. [#625727]
	* Force column span recalculation when switching between number and
	  error. [#625994]
	* Fix scroll when selecting a merged cell. [#626065]
	* Fix objects dragging when zoomed. [#626484]
	* Fix control points behavior when zooming.
	* Fix in-cell editing when zoom < 100%. [#626279]

Morten:
	* Survive malformed xml files.
	* Fix win32 random problem.  [#533779]
	* Fix IMPOWER problem.  [#627014]
	* Avoid criticals in ODS import.
	* Fix problem with collect cache.  [#627079]
2010-08-17 15:02:48 +00:00
obache
4b023396c7 Update mapm to 4.9.5a.
Based on PR#43736 by Kamel Derouiche.

V 4.9.5 -  Dec 10, 2007    Updated software license, allowing distribution
			   of modified source code.

			   The actual library source code is identical to
			   version 4.9.2 (except the obvious library version
			   identifier, and Digital Mars #ifdef).

			   Added support for the Digital Mars Compiler.

			   Added build script for Intel Linux Compiler.

V 4.9.5a - Feb 21, 2010    Updated authors email address.

			   Note that there are no changes to the library
			   source code - so the library will still identify
			   itself as "4.9.5".

			   Added Makefile for Microsoft Visual Studio 2005.

			   Added another Makefile for MAC OSX (for 10.6).
2010-08-17 11:24:20 +00:00
asau
4f7d1b73e1 Update to muParser 1.32
Changes in muParser 1.32
------------------------

  Changes:
   * "example3" renamed to "example2"
   * Project/Makefiles files are now provided for:
           - msvc2003
           - msvc2005
           - msvc2008
           - watcom   (makefile)
           - mingw    (makefile)
           - bcc      (makefile)
   * Project files for borland cpp builder were removed

  New features:
   * Added function returning muparsers version number
   * Added function for resetting the locale

  Bugfixes:
   * Changes example1 in order to fix issues with irritating memory leak reports.
     Added conditional code for memory leak detection with MSVC in example1.
     (see: http://www.codeproject.com/KB/recipes/FastMathParser.aspx?msg=3286367#xx3286367xx)
   * Fixed some warnings for gcc


Changes in muParser 1.31cp
--------------------------

  Changes:
   * Archive structure changed
   * C# wrapper added
   * Fixed issued that prevented compiling with VS2010 Beta2
2010-08-11 20:33:19 +00:00
asau
6f1919bf2c Update to Newmat11
Contributed by Kamel Derouiche via PR pkg/43741

Changes in this version:

It works with Borland Builder version 6, 8;
Microsoft Visual C++ 6,7,8; Open Watcom 1.7a;
Gnu version 3, 4 and Intel for Windows & Linux compilers 9, 10.

Options and work-arounds for older compilers are being removed.

You can enter values from an integer array with statements like

  Matrix A(3,2); int a[] = { 11,12,21,22,31,33 };  A << a;

There is a new matrix type SquareMatrix. You can use this where
you know a matrix is square. The only place where the information
that a matrix is used is in the Kronecker product KP(A,B).
If A is band and B is any square matrix type (i.e. type SquareMatrix
or band, triangular, symmetric or diagonal) the result is band.
If B is type Matrix then the result is of type Matrix.
Apart from this it may be worth using the SquareMatrix type to
improve readability of a program and to make sure that a matrix
that is intended to be square really is square.

There is a new routine for carrying out cross products of
ColumnVectors or RowVectors of length 3 and new routines for
updating a triangular matrix derived from a Cholesky decomposition.

Interfacing with old C functions involving one and two
dimensional arrays is simplified.

Additional QR functions, extend_orthogonal function.

Lower-case versions of functions.

You can use the manipulators scientific and fixed in the matrix
output expressions.
2010-08-11 20:06:25 +00:00
drochner
877c560dcd update to 0.6.7, from Kamel Derouiche per PR pkg/43731
changes:
-implement visual factorint()
-implement symarray(): numpy array of sympy symbols
-misc fixes and improvements
2010-08-11 13:36:48 +00:00
drochner
6b522a9bac update to 0.15, from Kamel Derouiche per PR pkg/43730
many fixes and improvements, too much to list here
2010-08-10 18:04:30 +00:00
drochner
f58e79b53e +py-gmpy 2010-08-10 18:01:21 +00:00
drochner
301468bec7 add py-gmpy-1.12, a Python wrapper for math/gmp, from Kamel Derouiche
per pkgsrc-wip
2010-08-10 17:59:00 +00:00
drochner
a2ce537d82 update to 0.7.2 which gives it a MASTER_SITE and a distfile again,
I don't know of other changes
from Kamel Derouiche per PR pkg/43735
2010-08-10 12:35:34 +00:00
drochner
2735fb3dab update to 1.10.8
changes:
-Add new Excel and Openformula units ("pica" and "picapt")
-New functions DATE2HDATE, DATE2HDATE_HEB and DATE2JULIAN
-UI improvements
-bugfixes
2010-08-05 18:43:14 +00:00
seb
eace08b6f6 Add & enable p5-Math-Base36 2010-08-05 00:12:59 +00:00
seb
d4ebf0015e Initial import of p5-Math-Base36 version 0.07 in the NetBSD Packages
Collection.

The Perl 5 module Math::Base36 converts to and from Base36 numbers
(0..9 - A..Z).
2010-08-05 00:12:28 +00:00
dholland
4c271e2952 bump PKGREVISION for yesterday's fix (PR 42507) 2010-08-02 09:01:01 +00:00
sno
3ef8cf7171 Updating math/p5-Set-Infinite from 0.63nb1 to 0.65
pkgsrc changes:
- add license definition

Upstream changes:
0.65   2010-04-26
- documentation fix

0.64   2010-04-26
- s/simmetric/symmetric/
  reported by Richard Jelinek
2010-08-01 21:05:37 +00:00
sno
65dabbc91f Updating math/p5-Excel-Template from 0.31 to 0.32
pkgsrc changes:
- adjust dependencies
- remove executable file bits from perl modules
- adjust installer type

Upstream changes:
0.32 Mon Jul  5 18:58:05 CEST 2010
    Official release for development release 0.31_1

0.31_1 Mon Jun 28 16:51:44 CEST 2010
    - Add autofilter to worksheet
    - Swichting to Module::Install
2010-08-01 21:02:36 +00:00
sno
298c1ee139 Updating math/p5-Spreadsheet-Read from 0.39 to 0.40
pkgsrc changes:
- add license definition
- adjust dependencies

Upstream changes:
0.40	Wed 31 Mar 2010
    - Default option for clip fixed (RT#56151 - Alan James)
2010-08-01 20:54:34 +00:00
sno
396a6ab917 Updating math/p5-Math-BaseCnv from 1.4.75 to 1.6
pkgsrc changes:
- add license definition
- adjust regex for removing instant time point in version number

Upstream changes:
    - 1.6.A6FGHKE Tue Jun 15 16:17:20:14 2010
      * bumped minor version number so they'll keep ascending (without PT
      comprehension)
2010-08-01 20:26:44 +00:00
dholland
e7a6e62ba2 Additional INSTALLATION_DIRS entry from Robert Elz in PR 42507.
While here, fix typo in COMMENT.
2010-07-31 22:19:16 +00:00
asau
8756d19398 "fortran" -> "fortran77" except where it is clear that it isn't F77.
"fortran" is alias of "fortran77" for now, but it will change later.
2010-07-30 10:36:22 +00:00
asau
5fe746245a + mpcomplex 2010-07-27 17:15:09 +00:00
asau
6e4eeb7f12 Import MPC (multiprecision complex arithmetic library) version 0.8.2
as math/mpcomplex.
Packaged by Marko Schuetz for pkgsrc-wip.

MPC is a C library for the arithmetic of complex numbers with
arbitrarily high precision and correct rounding of the result.
It is built upon and follows the same principles as MPFR.
2010-07-27 17:09:45 +00:00
drochner
7cf8601d45 update to 1.10.7
changes:
-Improve function syntax and formula guru tooltips
-Read HTML files with nested tables
-misc fixes
2010-07-20 12:15:43 +00:00
joerg
47cf0a9e0e py-cython dependency doesn't support 2.4. 2010-07-17 18:13:08 +00:00
drochner
edf84c4389 update to 2.2
changes:
-new compressor called Blosc (speed-up)
-A new `tables.Expr` module (based on Numexpr) that allows to do
 persistent, on-disk computations on many algebraic operations.
-Support for HDF5 hard links, soft links and automatic external links
-Suport for 'fancy' indexing
-bugfixes
2010-07-16 12:17:59 +00:00
drochner
2f7930ee63 +py-numexpr 2010-07-16 12:14:16 +00:00
drochner
c70d3ff296 add py-numexpr-1.3.1, a numerical expression evaluator for NumPy 2010-07-16 12:12:17 +00:00
asau
2e511e9f92 Bump revision after math/mpfr update. 2010-07-15 21:35:10 +00:00
asau
f47130d623 Update MPFR to version 3.0.0.
Contributed by Stathis Kamperis on IRC.

Changes from versions 2.4.* to version 3.0.0:

- The "boudin aux pommes" release.
- MPFR 3.0.0 is binary incompatible with previous versions but (almost)
  API compatible.  More precisely the obsolete functions mpfr_random
  and mpfr_random2 have been removed, the meaning of the return type
  of the function mpfr_get_f has changed, and the return type of the
  function mpfr_get_z is now int instead of void.  In practice, this
  should not break any existing code.
- MPFR is now distributed under the GNU Lesser General Public License
  version 3 or later (LGPL v3+).
- Rounding modes GMP_RNDx are now MPFR_RNDx (GMP_RNDx kept for
  compatibility).
- A new rounding mode (MPFR_RNDA) is available to round away from zero.
- The rounding mode type is now mpfr_rnd_t (as in previous versions,
  both mpfr_rnd_t and mp_rnd_t are accepted, but mp_rnd_t may be
  removed in the future).
- The precision type is now mpfr_prec_t (as in previous versions, both
  mpfr_prec_t and mp_prec_t are accepted, but mp_prec_t may be removed
  in the future) and it is now signed (it was unsigned in MPFR 2.*, but
  this was not documented). In practice, this change should not affect
  existing code that assumed nothing on the precision type.
- MPFR now has its own exponent type mpfr_exp_t, which is currently
  the same as GMP's mp_exp_t.
- Functions mpfr_random and mpfr_random2 have been removed.
- mpfr_get_f and mpfr_get_z now return a ternary value.
- mpfr_strtofr now accepts bases from 37 to 62.
- mpfr_custom_get_mantissa was renamed to mpfr_custom_get_significand
  (mpfr_custom_get_mantissa is still available via a #define).
- Functions mpfr_get_si, mpfr_get_ui, mpfr_get_sj, mpfr_get_uj,
  mpfr_get_z and mpfr_get_z_2exp no longer have cases with undefined
  behavior; in these cases, the behavior is now specified, and in
  particular, the erange flag is set.
- New functions mpfr_buildopt_tls_p and mpfr_buildopt_decimal_p giving
  information about options used at MPFR build time.
- New function mpfr_regular_p.
- New function mpfr_set_zero.
- New function mpfr_digamma.
- New function mpfr_ai (incomplete, experimental).
- New functions mpfr_set_flt and mpfr_get_flt to convert from/to the
  float type.
- New function mpfr_urandom.
- New function mpfr_set_z_2exp (companion to mpfr_get_z_2exp, which
  was renamed from mpfr_get_z_exp in previous versions).
- Speed improvement for large operands in the trigonometric functions
  (mpfr_sin, mpfr_cos, mpfr_tan, mpfr_sin_cos): speedup of about 2.5
  for 10^5 digits, of about 5 for 10^6 digits.
- Speed improvement for large operands of the inverse trigonometric
  functions (arcsin, arccos, arctan): about 2 for 10^3 digits, up to
  2.7 for 10^6 digits.
- Some documentation files are installed in $docdir.
- The detection of a GMP build directory (more precisely, the internal
  header files of GMP) was previously done separately from the use of
  the --with-gmp-build configure option. This was not consistent with
  the documentation and with other parts of the configure script. So,
  as of MPFR 3.0.0, the internal header files of GMP are now used if
  and only if the --with-gmp-build configure option is given.
- The configure script recognizes some extra "long double" formats
  (double big endian, double little endian, double-double big endian).
- MPFR manual: added "API Compatibility" section.
- Test coverage: 97.1% lines of code.
- Bug fixes.
2010-07-15 20:30:40 +00:00
sbd
3f4b7dbd32 Recursive PKGREVISION bump for the net/mDNSResponder update 2010-07-14 11:11:13 +00:00
adam
08ddcb0850 Changes 4.44:
The following suffixes for variables and constraints were
implemented in the MathProg language:

.lb     (lower bound),
.ub     (upper bound),
.status (status in the solution),
.val    (primal value), and
.dual   (dual value).

Now the MathProg language allows comment records (marked by
'#' in the very first position) in CSV data files read with the
table statements. Note that the comment records may appear only
in the beginning of a CSV data file.

The API routine glp_cpp to solve the Critical Path Problem was
added and documented.
2010-07-13 06:46:56 +00:00
drochner
499573744b update to 5.30.2
changes: translation updates
2010-07-06 15:39:35 +00:00
asau
64285a0d2d Update to FriCAS 1.1.0
Notable changes (compared to version 1.0.9) include:

- New domains and packages: VectorSpaceBasis domain,
  DirichletRing domain, 3D graphic output in Wavefront .obj format,
  specialized machine precision numeric vectors and matrices (faster
  then general vectors and matrices), Html output.

- Support Clifford algebras corresponding to non-diagonal matrix,
  added new operations.

- 'normalize' now tries to simplify logarithms of algebraic constants.

- New functions: Fresnel integrals, carmichaelLambda.

- Speed improvements: several polynomial operations are faster,
  faster multiplication in Ore algebras, faster computation of
  strong generating set for permutation groups, faster coercions.

- Several improvements to the guessing package (in particular new
  option Somos for restricting attention to Somos-like
  sequences

Bug fixes, in particular:

- FriCAS can now compute multiplicative inverse of a power series
  with constant term not equal to 1.

- Fixed a problem with passing interpreter functions to algebra.

- Two bugs causing crashes in HyperDoc interface are fixed.

- FriCAS now ignores sign when deciding if number is prime.

- A failing coercion that used to crash FriCAS is now detected.

- 'has' test sometimes gave wrong result.

- Plotting fixes.
2010-07-05 22:41:16 +00:00
adam
f558f0c81c Changes 2.11.1:
* R CMD INSTALL checks if dependent packages are available early on
* in the installation of source packages, thereby giving clearer
  error messages.
* R CMD INSTALL --build now names the file in the format used
  for Mac OS X binary files on that platform.
* BIC() in package stats4 now also works with multiple fitted models,
  analogously to AIC().
* Use of file extension .C for C++ code in packages is now
  deprecated: it has caused problems for some 'make's on
  case-insensitive file systems (although it currently works
  with the recommended toolkits).
* The C function mkCharLenCE now no longer reads past 'len' bytes
  (unlikely to be a problem except in user code).
* On systems without any default LD_LIBRARY_PATH (not even
  /usr/local/lib), [DY]LIB_LIBRARY_PATH is now set without a trailing colon.
* More efficient utf8ToInt() on long multi-byte strings with
  many multi-byte characters.
* aggregate.ts() gave platform-depedent results due to rounding
  error for ndeltat != 1.
* package.skeleton() sometimes failed to fix filenames for .R or
  .Rd files to start with an alphanumeric.
2010-07-03 07:25:57 +00:00
joerg
0814f866e7 Fix configure handling of Magick option 2010-06-27 17:52:56 +00:00
obache
41bd0a14cf Adjust patch to upstream commit. 2010-06-18 01:53:47 +00:00
obache
8b4f772af2 Fixes build failure on NetBSD-5.0.2.
Use fgets(3) instead of getline(3).
2010-06-17 08:56:46 +00:00
obache
1615c1daf6 Update HOMEPAGE from Old(pre-GNOME, caltool) one. 2010-06-17 07:45:59 +00:00
obache
f88a67b49d Improve DESCR,
remove "From the README" and update from the README without version number.
2010-06-17 07:33:47 +00:00
obache
f0e0603cf6 Require gtk2+>=2.18.0 2010-06-17 07:21:29 +00:00
drochner
f252ff4e63 update to 1.10.5
changes:
-bugfixes
-better tests
-Include version number in HTML export
-Improve page setup dialog
-Add non-linear solver
2010-06-15 21:16:20 +00:00
drochner
40d52dc144 update to 5.30.1
This switches to the gnome-2.30 release branch
2010-06-15 21:09:31 +00:00
wiz
cec79fc3a7 PKGREVISION bump for png-1.4.x shlib change.
(missed those and *emacs* the first time round because they pull
in their png dependencies via default-on options; they were included
in the test bulk build though)
2010-06-14 15:33:12 +00:00
wiz
92e0cb52cb Bump PKGREVISION for libpng shlib name change.
Also add some patches to remove use of deprecated symbols and fix other
problems when looking for or compiling against libpng-1.4.x.
2010-06-13 22:43:46 +00:00
markd
0d1fc4a1ee Update py-rpy to 2.1.3
Works with recent R and recent python.
2010-06-09 21:04:26 +00:00
markd
2d64fbe1b3 Update to scipy 0.7.2
SciPy 0.7.2 is a bug-fix release with no new features compared to 0.7.1. The
only change is that all C sources from Cython code have been regenerated with
Cython 0.12.1. This fixes the incompatibility between binaries of SciPy 0.7.1
and NumPy 1.4.

SciPy 0.7.1 is a bug-fix release with no new features compared to 0.7.0.
2010-06-06 02:37:08 +00:00
adam
86fe97e890 Added graphicsmagick as an option, fixing PR#43218 2010-06-02 18:35:38 +00:00
obache
1656961b6f Update py-Scientific to 2.8.
Based on PR#43282 by Wen Heping.

2.7.9 --> 2.7.10
----------------

Bug fixes:

- Removed all occurrences of "as" as a variable name for compatibility
  with Python 2.6.

- Installation without the netCDF module did not work.

Improvements:

- Vector.dyadicProduct() was replaced by a more efficient implementation.

- Scientific.IO.PDB: Atom objects now have a parent attribute whose
  value is the containing group.


2.7.8 --> 2.7.9
---------------

License change: ScientificPython is now distributed under the
CeCILL-C license, which is an adaptation of the LGPL to French
law. The previously used CeCILL license, similar to the GPL, was
considered too restrictive.

Bug fixes:

- MPI interfaces did not work correctly with NumPy and/or Python 2.5.

Improvements:

- Compilation script for mpipython works around a Python configuration
  bug under MacOS X.
- Docstrings have been cleaned up.

2.7.7 --> 2.7.8
---------------

Bug fixes:

- Due to a typo in Scientific.IO.PDBSpaceGroups, some space group
  names were not found in the space group table.

Improvements:

- Vector objects can now be multiplied with NumPy scalar objects
  (which is what you get when extracting numbers from NumPy
  arrays). Due to the way NumPy scalars handle multiplication, the
  result used to be an array rather than a Vector, which caused
  various applications to crash.

- The build procedure under Windows has been improved. It can
  generate a binary installer that includes the netCDF DLL,
  making ScientificPython independent of a netCDF installation.

2.7.6 --> 2.7.7
---------------

Bug fixes:

- Installation on Windows didn't work because the Unix maths libraries
  don't exist there.


Improvements:

- InterpolatingFunction and TensorField objects can represent
  periodic functions/fields.

- DistributedComputing: the watchdog period of slave processes is now
  a user-definable parameter.

- PDBSpaceGroups was simplified, making it shorter and faster to load.

- Scientific.N contains the array type object in the variable array_type.
  This makes it possible to write Pyrex modules using arrays in such a
  way that they always use the numeric module for which ScientificPython
  was compiled.


2.7.5 --> 2.7.6
---------------

Bug fixes:

- NumPy compatibility fixes.

- Pyro 3.6 compatibility fix in DistributedComputing.MasterSlave


2.7.4 --> 2.7.5
---------------

New features:

- Scaling, inversion, and shear transformations added to
  Geometry.Transformations

Improvements:

- PDB parser handles CRYST1, SCALEn and MTRIXn records
- Better identification of the Numerics package that is being used

Bug fixes:

- Scientific_affinitypropagation.c compiles with NumPy


2.7.3 --> 2.7.4
---------------

New features:

- New module Clustering.AffinityPropagation.
- New class BSP.ParRootSequence.

Bug fixes:

- Replaced float equality test in Functions.InterpolatingFunction
- Removed exception for order > 1 in Derivatives.DerivVar.__init__
- Fixed reading of non-string attributes from netCDF files.

Improvements:

- New methods getBinIndices and getBinCount in Statistics.Histogram.Histogram
- Physics.PhysicalQuantities: unit definitions added to doc string

2.7.2 --> 2.7.3
---------------

Improvements:

- Added multi-module setup for master-slave computations.
- More information available through task_manager.
- task_manager can start slave processes.

2.7.1 --> 2.7.2
---------------

Bug fixes:

- Scientific_netcdf would not compile with NumPy under Python 2.4
  because NumPy also defined Py_ssize_t.

2.7 --> 2.7.1
-------------

Improvements:

- NumPy compatibility. Scientific_netcdf was revised by hand.
  The Python code was run through numpy.oldnumeric.alter_code1 to
  identify the critical sections, which were then all handled in
  some way. It is possible that there are still incompatibilities
  of the kind that numpy.oldnumeric.alter_code1 cannot detect


2.5.12hg --> 2.7
----------------

New features:

- Subpackage Scientific.DistributedComputing for easy parallelization
  of independent tasks.

2.5.11 --> 2.5.12hg
-------------------

Bug fixes:

- VRML2 output would crash for scenes containing Line objects
- Pyrex implmentation of vector objects could crash instead of raising
  an exception in divide operations.
- Pyrex implmentation of vector objects would raise exceptions incorrectly
  under Python 2.5

Improvements:

- builds Macintosh packages with documentation and examples

2.5.10 --> 2.5.11
-----------------

Bug fixes:

- Pyrex implementation of vector objects raised exceptions in comparisons
- Pyrex implementation of vector objects did not accept negative indices
- Some object deletions during conversion to epydoc had to be reversed

Improvements:

- Two test suites

2.5.9 --> 2.5.10
----------------

Bug fixes:

- Fixed netCDF error handling

Improvements:

- Support for NumPy (not very well tested yet)
- Scientific.NumberDict more efficient

2.5.8 --> 2.5.9
---------------

Improvements:

- Scientifc.IO.NetCDF supports the new 64-bit data structures in Python 2.5
  (not yet tested on a 64-bit machine)
- Docstrings modified for use with Epydoc.

2.5.7 --> 2.5.8
---------------

Bug fixes:

- Syntax error in Scientific.IO.PDB
- Attribute deletion in netCDF file and variable objects caused a crash.

2.5.6 --> 2.5.7
----------------

Bug fixes:

- Tensor-vector multiplication was incorrect with the Pyrex implementation
  of vector objects.

2.5.5 --> 2.5.6
----------------

Bug fixes:

- Scientific.BSP.ParClass did not pass on __call__ and __getitem__
  to local class
- Scientific.BSP.ParClass: Class wrappers did not always return the right
  global object.

2.5.4 --> 2.5.5
----------------

Bug fixes:

- Scientific.IO.NetCDF.NetCDFVariable.assignValue() had incomplete error
  reporting. Some errors would not raise exceptions as required.


2.5.3 --> 2.5.4
----------------

Improvements:

- A "test" method on MPI request objects permits to check if data
  is available (thanks to Jakob Schiotz for this addition).

Bug fixes:

- The new Pyrex vector objects could not be pickled.

2.5.1 --> 2.5.3
----------------

Improvements:

- The class Scientific.Geometry.Vector has been reimplemented in Pyrex,
  yielding much faster vector operations. There is, however, the restriction
  that the vector elements must be of type "float". For the rare applications
  where this condition is not fulfilled (such as
  Scientific.Functions.Derivatives.DerivVector), the Python implementation
  remains accessible as Scientific.Geometry.VectorModule.Vector.

2.4.9 --> 2.5.1
----------------

Improvements:

- Vector and Tensor objects permit comparison with other types
  of objects (which always return False)
- Numarray can be used instead of Numeric as far as possible
  (see README for details)

2.4.7 --> 2.4.9:
----------------

Bug fixes:

- Integer array attributes caused a TypeError with recent versions of
  Numeric (that don't do silent casts from Long to Int any more).

Additions:

- Method "threeAngles" in Geometry.Transformation.Rotation.


2.4.6 --> 2.4.7:
----------------

Bug fixes:

- Scientific.BSP: alltrue() and anytrue() sometimes returned wrong results.

Additions:

- Scientific.Visualization.VMD can now correctly launch VMD under Windows
2010-05-29 03:18:54 +00:00
tnn
bc99992404 math/orpie was broken by an ocaml update three years ago and nobody stepped
up to fix it, so let's remove it for now.
2010-05-28 17:03:53 +00:00
adam
9458ebbb54 Changes 4.43:
* This is a maintainer release.
* `configure.ac' was changed to allow building the package under
  Mac OS and Darwin with ODBC support.
* The SQL table driver was improved to process NULL data.
* Some bugs were fixed in the LP/MIP preprocessor.

Changes 4.42:
* The new API routines were added.
* The new command-line options were added to the stand-alone solver glpsol.
2010-05-21 10:36:56 +00:00
drochner
3a8f508f30 update to 0.9.3
This switches from Qt3 to Qt4.
2010-05-20 17:48:59 +00:00
obache
a1516f34a0 + TinySVM 2010-05-19 11:48:39 +00:00
obache
db9b4a64bb Import TinySVM-0.09 as math/TinySVM.
TinySVM is an implementation of Support Vector Machines (SVMs) [Vapnik 95],
[Vapnik 98] for the problem of pattern recognition. Support Vector Machines is a
new generation learning algorithms based on recent advances in statistical
learning theory, and applied to large number of real-world applications, such as
text categorization, hand-written character recognition.
2010-05-19 11:47:15 +00:00
drochner
00810d6d2e update to 0.10.3
changes:
-UI improvements
-bugfixes
-Improve error handle for complex functions
-Improve IMPOWER
2010-05-17 16:30:12 +00:00
taca
5b88201a2b Update pear-Numbers_Words package to 0.16.2.
Changelog:

* Fixed bug #16435 (improper use of substr() in Polish extension);
* Fixed bug #16667 (wrong spelling of 40 in Hungarian extension) (Vlajos);
* Fixed bug #16733 (incorrect rounding of cents);
* Added optional dependency on Math_BigInteger;
* Improved unit tests (Daniel O'Connor).
2010-05-16 09:44:35 +00:00
adam
7b3e746fc1 Changes 0.9.2:
* To compile fityk, Boost (only headers) and xylib must be installed first.
  Fityk tarball does not contain a copy of boost and xylib now.
* user-defined functions: split functions can be defined in this way:
  SplitG(h, c, w1, w2) = x < c ? Gaussian(h, c, w1) : Gaussian(h, c, w2)
* added info-numeric-format option
* a couple of bug fixes

Changes 0.9.1:
* added cfityk to Windows installer
* Unix only: fitting can be interrupted by the INT signal
* changed output of "info errors", see the manual for details
* GUI: "plot in @n" changes selected datasets (useful in scripts)
* many bugs fixed

Changes 0.9.0:
* GUI: Data > Editor dialog was replaced with two dialogs: Data > Table
  and Data > Edit Transformations
* added Lua bindings (configure option --enable-lua)
* a syntax to execute output from external program: command ! program [args...]
* xyConvert (which requires wx 2.9) is built by default.
  Added flag --disable-xyconvert, which must be used with wx 2.8.
* parsing of info command was rewritten, but functionality is almost the same
* bug fixes
2010-05-15 07:12:00 +00:00
adam
1a39bd0193 Changes 0.6:
* fixed reading of Bruker v3 files
* changes in API, added C API

Changes 0.5:
* added support for compressed files \*.gz (requires zlib) and \*.bz2 (bzlib)
2010-05-15 06:19:27 +00:00
asau
57311ac6ea Update to Maxima 5.21.1:
New items in core:

 * plot3d: multiple surfaces; built-in spherical transformation


   Other revisions:

 * revision of hypergeometic functions
 * extension of Bessel functions
 * extension of abs_defint function
 * extension of Riemann zeta function
 * limits of signum functions
 * package draw: new graphic object 'tube'


   Bug fixes:

   2979579: plot3d with format xmaxima does not work in Xmaxima
   2976744: postscript terminal requires manual reset of default termina
   2976657: Usage of gammagreek and %gammagreek
   2974616: mat_cond
   2969599: integrate bug?
   2968344: gamma_incomplete(1.0, 4.368265444147715e+19) fails
   2968174: Integration of hypergeometric bug
   2965201: run_testsuite() causes Lisp error
   2965115: 2*%e,numer -> single float precision
   2962943: simplifya gives Lisp error for a cons
   2961822: sinh(0.0b0) causes Maxima to abort
   2957758: plotting gamma_incomplete_regularized incorrect
   2954141: Kummer reflection
   2953369: Definite Integration of 1/(a-b*cos(x)) wrong
   2949677: hypergeometric floating point
   2948800: integrate((1-cos(2*x)^2)^2/x^4,x,0,inf) wrong
   2945609: incomplete/misleading documentation of coeff
   2943581: Grind omits empty strings
   2943400: 'linel' command can crash 'maxima'
   2938716: too much evaluation in translated code
   2938177: simplify_sum(sum(k^n,k,1,m)) -> stack overflow
   2938078: Crash on attached input
   2937837: find_root_error documentation incorrect
   2935631: bfloat(log(n)) can be different from log(bfloat(n))
   2933996: abs_integrate bug
   2933440: sqrt(-z^2) simplifies to %i*sqrt(z^2) for z complex
   2932096: allroots fails for real polynomial.
   2927502: abs() or cabs() are much slower than just sqrt(re^2+im^2)
   2924831: file_type is wrong for ccl on mac os x
   2921946: Expansion of bessel_k(1/2,x) with radexpand:false
   2920190: non-integer value for maxposex
   2919296: binomial sums
   2914376: implicit_plot error
   2914296: Limit gets Maxima stuck
   2914176: Conversion of rational to bfloat is inaccurate
   2913614: LAPACK: dgesvd is broken
   2911891: gcfac gives Lisp error
   2910437: non-repeatable beta_incomplete(1b0,1,z)
   2910001: optimization of bfloat input
   2909980: optimization for log of bfloats
   2909917: documentation type -- jornan
   2907952: diff of a taylor series
   2907815: sold variable in diag(x) (package diag) should be local
   2907727: Incorrect Integral with option integrate_use_rootsof
   2892710: Allow easier library access
   2880797: bad answer in integrate(sqrt(sin(t)^2+cos(t)^2),t,0,2*%pi)
   2875784: fourier integral incorrect
   2859856: csign(log(x)) --> pnz
   2852992: sqrt(-1/x)-%i/sqrt(x) not zero
   2843621: GosperSum error
   2808861: list function arguments with mode_declare in translate
   2786017: realonly in algsys.lisp
   2607007: legend does not work
   1869296: hgfred([1,2],[6],1) bogus
   1857562: hgfred([a,b],[c], 0) -/--> 1
   1633149: sum bug that never happens
   1620165: assoc needs to check argument, was: Strange error
   1531688: hgfred([ ], [ ], 0)
   1440286: documentation for 'listofvars'
   1440069: euler numbers & zerobern
   1376392: limit(x/(2+sin(1/x)), x, 0); wrong result
   1372264: no user doc for 'numer_pbranch'
   1219846:  properties of translated functions
   1106912: limit(x/sin(x)^2,x,inf)
   1010768: sqrt(1/z) - 1/sqrt(z) => 0
    932095: ode2 redundant asksign
    910270: 1/+3*x parses as 1/(+3*x)
    903166: assume works for real values only
    900860: Simplifications involving abs
    893633: depends(a,[b,b,b])
    856209: inconsistency between facts() and facts(v)
    840848: trigreduce doesn't enter unknown functions
    811522: redundant question in limit
    781657: binomial(x,x) => 1, but binomial(-1,-1) => 0
    777564: subtraction \"-\"(a,b) should work/FIX
    776441: orderlessp not transitive
    767556: Distributing operations over =
    767528: op(box(a)) bogus
    752417: KEEPFLOAT:TRUE ignored by SOLVE
    719968: No SIMP function
    710307: orderlessp of bfloat, %e, and inf
    660876: taylor and keepfloat ERR
    655270: Incomplete integration
    643254: orderlessp([rat(x)], [rat(x)])
    593351: limit/sin(inf)etc. should give 0, not IND
2010-05-07 03:16:06 +00:00
adam
1953f159d1 Changes 2.11.0:
* Packages must have been installed under R >= 2.10.0, as the
  current help system is the only one now supported.
* A port to 64-bit Windows is now available as well as binary package
  repositiories: see the 'R Administration and Installation Manual'.
* Argument matching for primitive functions is now done in the same way
  as for interpreted functions except for the deliberate exceptions
	call switch .C .Fortran .Call .External
  all of which use positional matching for their first argument,
  and also some internal-use-only primitives.
* The default device for command-line R at the console on Mac OS X
  is now quartz() and not X11().

New features
* The 'open' modes for connections are now interpreted more consistently.
* R CMD INSTALL now uses the internal untar() in package utils.
* help(try.all.packages = TRUE) is much faster.
* R CMD check has a new option '--timings' to record per-example timings
  in file <pkg>.Rcheck/<pkg>-Ex.timings.
* The TRE library has been updated to version 0.8.0 (minor bugfixes).
More...
2010-05-06 07:33:40 +00:00
hauke
27c3256a85 teapot is a spread sheet program for UNIX, which uses modern concepts
besides being portable and extensible, for instance three dimensional
tables and iterative expressions.

The most important feature is the funktional addressing of cells,
unlike the traditional approach like A0, C5, etc. which is probably
inherited from VisiCalc.
2010-05-04 14:45:32 +00:00
hauke
1c190d1bbd Add teapot, a CLI spreadsheet application. 2010-05-04 14:19:36 +00:00
drochner
751ea06757 update to 1.10.2
changes:
-improvements to ODF support
-UI improvements
-bugfixes
-documentation updates
2010-04-28 18:38:11 +00:00
tron
0a86b59cb2 Don't hardcode Python version number. This fixes the build with Python 2.6. 2010-04-25 00:02:20 +00:00
asau
bdfecad16e Use BSD_INSTALL_LIB to install shared objects.
Rediscovered by Taylor R. Campbell in PR 43205
2010-04-24 20:58:36 +00:00
gls
26e6744152 Update to 1.4.1.
From Wen Heping in PR pkg/43204.

This minor release removes datetime support, which fixes the binary
incompatibility issues with SciPy and other packages. It also includes several
bug fixes. No new features are introduced.

Bugs fixed
----------
- #1336: Fix for 1299 exposes Bus error on Sparc
- #1379: CPU ID not set correctly on PARISC
- #1388: frombuffer calls PyErr_Format without throwing an error
- log1p
- kaiser for M=1
- paver execution on Windows 7 for Python 2.6
- several fixes to Chebyshev and Polynomial
2010-04-24 17:13:55 +00:00
zafer
9602b5c98e remove broken http mirror. 2010-04-17 16:11:08 +00:00
drochner
8f15d583b9 update to 0.9.7
changes:
General build updates and bug fixes, including the ability to
 build against cln >= 1.2
2010-04-13 17:28:34 +00:00
drochner
c3ffed422f update to 0.9.7
changes:
-General build updates and bug fixes
-Bug fix for segfaults with some uses of integrate()
-New Simplified Chinese translation
-Fix crash with unsupported operator in RPN syntax
-Fix reduction of vector size
2010-04-13 17:25:22 +00:00
drochner
30358946b6 update to 1.3.1
This release fixes a crash in double_approx(cl_RA) on 64-bit platforms
and adds basic support for Renesas SH (sh4).
2010-04-13 17:22:09 +00:00
taca
b4b06369b8 Update ruby-rb-gsl package to 1.14.3.
Mon Mar 22 23:54:07 MDT 2010
  * GSL-1.14 support
    * Added GSL::Multiset class
    * Added GSL::Function#glfixed(a, b table)

Sun Aug 16 19:01:31 BOT 2009
  * Added Non-negative Matrix Factorization (NMF) support (by Roman Shterenzon)

Sat Aug  8 22:36:24 BOT 2009
  * Added GSL-1.13 features:
    * Added GSL::Monte::Miser#params_get, GSL::Monte::Vegas#params_get
    * Added GSL::BSpline::greville_abscissa(i)
    * Added GSL::Poly#eval_derivs(x)
    * Added a new minimization algorithm "quad_golden"
    * Added a new multimin algorithm "nmsimplex2rand"

Tue Jun  9 10:42:30 JST 2009
  * Fixed bug in linalg.c (bug [#25842])

Thu Feb  2 12:16:38 JST 2009
  * Fixed a bug in GSL::Histogram.alloc_uniform() (bug [#23040])
  * Fixed a bug in GSL::Vector#/ (bug [#23334])

Thu Nov  6 17:34:18 JST 2008
  * Match with the tensor extension version 0.99
    * now not compatible for the versions older than tensor-0.97.

Sat Jul 26 08:23:45 JST 2008
  * GSL::Poly.eval now handles complex numbers (GSL-1.11)
  * Added new quasi-random generators "halton" and "reversehalton"
  * Added a module function GSL::MultiFit::linear_residuals() (GSL-1.11)
  * Fixed a bug in ODE solver

Mon Jun 30 22:07:24 JST 2008
  * Fixed GSL::Vector#normalize (#20865)

Mon May 26 19:21:15 JST 2008
  * Fixed a bug in GSL::Matrix::to_v (#19757)
  * Fixed a bug in GSL::Vector::Int multiplication (#19924)
2010-03-31 10:00:06 +00:00
asau
b3b8086a8c Recursive revision bump for GMP update, 2nd part. 2010-03-24 21:54:15 +00:00
asau
9d172bbac7 Recursive revision bump for GMP update. 2010-03-24 19:43:21 +00:00
schmonz
6bb67678c5 Take MAINTAINER. 2010-03-20 01:51:55 +00:00
schmonz
b96b7e68e7 DESTDIR support. 2010-03-20 01:32:56 +00:00
wiz
3c265874dd Remove two constants that are not defined by gsl any longer (since 1.13).
Fixes build, but bump PKGREVISION anyway since there were some packages
with this version that did build.

Set LICENSE.
2010-03-18 17:22:36 +00:00
asau
d13a0ca524 + kseg 2010-03-18 08:05:51 +00:00
dmcmahill
66e94048d9 Detect if the fortran compiler/libs have etime as an intrinsic or not instead
of hard coding it.  This package builds with both f2c and gfortran now.
2010-03-17 21:47:11 +00:00
sno
b0f0a50084 Updating math/p5-Spreadsheet-Read from 0.38 to 0.39
pkgsrc changes:
- Adjust dependencies

Upstream changes:
0.39	Tue 16 Mar 2010
    - Doc fix (RT#54507, Patrick Cronin)
    - Upped Copyright notices to 2010
    - Drop YAML version to 1.0
2010-03-16 22:41:56 +00:00
agc
14904631fa add and enable itpp 2010-03-16 21:23:48 +00:00
agc
cf6a14b7d4 initial import of itpp-4.0.7 into the packages collection
C++ library of mathematical, signal processing and communication
	routines

	Its main use is in simulation of communication systems and for
	performing research in the area of communications.  The kernel of the
	library consists of generic vector and matrix classes, and a set of
	accompanying routines.  Such a kernel makes IT++ similar to MATLAB or
	GNU Octave.
2010-03-16 21:22:13 +00:00
wiz
40f8080452 Update to 1.14:
* What is new in gsl-1.14:

** Upgraded to latest libtool, autoconf and automake (libtool-2.2.6b,
   autoconf-2.65, automake-1.11.1).  Fixes security hole in 'make
   dist' (see Automake CVE-2009-4029).

** Added support for "multisets", which are similar to permutations
   and combinations.  A multiset is an array of k integers in the
   range 0 to n-1 where each value may occur more than once. Multisets
   can be used to iterate over the indices of a k-th order symmetric
   tensor in n-space. (Rhys Ulerich)

** Added gsl_integrate_glfixed routines for performing fixed order
   Gauss-Legendre integration
   (Pavel Holoborodko, Konstantin Holoborodko, Rhys Ulerich)

** In the LMDER multi-dimensional fitting routines, the return code
   GSL_ENOPROG is now used instead of GSL_CONTINUE for the case where
   10 or more attempts to find a suitable trial step have been made
   without success. [bug #25383]

** The confluent hypergeometric function gsl_sf_hyperg_U (a,b,x) has
   been extended to support x < 0 for cases not involving
   singularities in 1F1(a,b,x). [bug #27859]

** The F-distribution gsl_ran_fdist_pdf now avoids unnecessary
   underflow and overflow and handles cases where n > 248. [bug
   #28500]

** The SVD routines now use a scaled version of the implicit QR method
   and compute the shift more reliably for values at the limit of
   double precision, avoiding potential NaNs. [bug #28767]

** A compile time error is emitted if the configuration stage prevents
   the functions gsl_isnan and gsl_finite from being defined.

** Added missing dereference in GSL_VECTOR_COMPLEX when not using
   GSL_RANGE_CHECK [bug #28017]

** Improved the range of gsl_sf_hyperg1F1(a,b,x) when a<0,b>0. [bug
   #28718]

** Added macros GSL_MAJOR_VERSION and GSL_MINOR_VERSION in
   <gsl/gsl_version.h>

** Improved gsl_eigen_symmv and gsl_eigen_symm to avoid a potential
   infinite loop when the tridiagonalised matrix contains very small
   values. [bug #28096]

** Added functions gsl_multifit_linear_usvd and
   gsl_multifit_wlinear_usvd for multilinear fitting without
   column-scaling of the fit matrix.
2010-03-15 10:45:28 +00:00
wiz
d39acc4c24 Set PREV_PKGPATH. 2010-03-14 16:37:07 +00:00
wiz
62aef970f7 Reimport misc/kseg into better matching category. 2010-03-14 16:36:22 +00:00
schmonz
369f31a31b Add a "doc" option (on by default) to control whether the documentation
is rendered and installed. Disabling the option is helpful e.g. for
web servers supporting OpenID logins, where X and TeX aren't present.
Bump PKGREVISION.
2010-03-13 22:16:34 +00:00
schmonz
979aacbac0 De-fuzz patch. 2010-03-13 21:48:38 +00:00
sno
605c2770ab Updating math/p5-Excel-Template-Plus from 0.04nb1 to 0.05
pkgsrc changes:
- Add license definition
- Adjust dependencies

Upstream changes:
0.05 Mon. Feb 22, 2010
    - updates copyright on all files
    * Test::Excel::Template::Plus
      - Fixing some test failures because of an
        internals change in Spreadsheet::ParseExcel
        - thanks to Chris Travers
2010-03-10 17:39:31 +00:00
sno
16cd3a3d62 Updating math/p5-Math-Pari from 2.010806.03 to 2.010806.04
pkgsrc changes:
- Adjust patch which allows to use math/pari

Upstream changes:
2.01080604
  Add (missing in 2.1.*) declaration for pari_init().
  Minor miscount in docs.
  Math::PariBuild: detecting `patch --binary' missed -p1; same for inc_h.diff
  Work around bug in XSUB.h (at least up to 5.11.2) with puts.
  Get GPDATADIR from gp, if present.
  Make self-documentation for switching to 2.3.* more explicit.
  kmx patch for mingw 32-bit Win-build:
	include windows.h (early!) in Pari.xs and highlvl.c
	enable assembler for this build
  x86_64 assembler detection after 2.2.7; thanks to Alexander Haeckel
2010-03-10 09:24:52 +00:00
taca
826f5752f8 Remove a zero size patch file. 2010-03-09 02:06:37 +00:00
drochner
d299ead789 deal with hicolor-item-theme cache, from Robert Elz per PR pkg/42898 2010-03-03 15:44:35 +00:00
obache
d3b0815e3e Update py-networkx to 1.0.1.
Based on PR#42834 by Wen Heping.
Update MASTER_SITES, set LICENSE=modified-bsd, 3-caulse BSD.

======================================================================
Networkx-1.0.1

Release date: 11 Jan 2010

See: https://networkx.lanl.gov/trac/timeline

Bug fix release for missing setup.py in manifest.

======================================================================
Networkx-1.0

Release date: 8 Jan 2010

See: https://networkx.lanl.gov/trac/timeline
New features

This release has sigificant changes to parts of the graph API to allow graph, node, and edge attributes. See http://networkx.lanl.gov//reference/api_changes.html

        * Update Graph, DiGraph, and MultiGraph classes to allow attributes.
        * Default edge data is now an empty dictionary (was the integer 1)
        * Difference and intersection operators
        * Average shortest path
        * A* (A-Star) algorithm
        * PageRank, HITS, and eigenvector centrality
        * Read Pajek files
        * Line graphs
        * Minimum spanning tree (Kruskal¡Çs algorithm)
        * Dense and sparse Fruchterman-Reingold layout
        * Random clustered graph generator
        * Directed scale-free graph generator
        * Faster random regular graph generator
        * Improved edge color and label drawing with Matplotlib
        * and much more, see https://networkx.lanl.gov/trac/query?status=closed&group=milestone&milestone=networkx-1.0

Examples

        * Update to work with networkx-1.0 API
        * Graph subclass example

======================================================================
Networkx-0.99

Release date: 18 November 2008

See: https://networkx.lanl.gov/trac/timeline
New features¢ù

This release has sigificant changes to parts of the graph API. See http://networkx.lanl.gov//reference/api_changes.html

        * Update Graph and DiGraph classes to use weighted graphs as default Change in API for performance and code simplicity.
        * New MultiGraph and MultiDiGraph classes (replace XGraph and XDiGraph)
        * Update to use Sphinx documentation system http://networkx.lanl.gov/
        * Developer site at https://networkx.lanl.gov/trac/
        * Experimental LabeledGraph and LabeledDiGraph
        * Moved package and file layout to subdirectories.

Bug fixes

        * handle root= option to draw_graphviz correctly

Examples

        * Update to work with networkx-0.99 API
        * Drawing examples now use matplotlib.pyplot interface
        * Improved drawings in many examples
        * New examples - see http://networkx.lanl.gov/examples/
2010-03-03 12:00:59 +00:00
wiz
2d5caecabb Reset maintainer for developers who gave back their commit bit. 2010-02-26 10:28:30 +00:00
wiz
3f50d9275e Do not change localedir. 2010-02-25 21:11:29 +00:00
joerg
3a9e1fda4e Use the correct libtool archive for linkage. 2010-02-25 19:55:28 +00:00
wiz
818dbb58fa + prng. 2010-02-24 20:49:54 +00:00
sno
b61e8dc49b Updating math/p5-Spreadsheet-WriteExcel from 2.36 to 2.37
Upstream changes:
2.37 February 2 2010 - Minor
    + Added set_chartarea() and set_plotarea() methods to set
      chart and plot background colours and border lines.
    ! Fixed bug where embedded charts gave "Data may be lost"
      warning. Reported by Andreas Strobitzer.
    ! Fixed issue where set_properties() didn't work with ::Big.
      Marked ::Big as deprecated in the docs in favour of using
      Spreadsheet::WriteExcel directly. Removed WorkbookBig.pm.
2010-02-23 11:21:55 +00:00
wiz
29dc46cfc0 Set LICENSE to modified-bsd. 2010-02-21 15:13:42 +00:00
schmonz
5cd143a50e Default x11 option to on (should have been done this way in previous).
Bump PKGREVISION.
2010-02-19 18:16:42 +00:00
wiz
8c93aa0107 Initial import of prng-3.0.2, packaged for wip by Wen Heping.
PRNG is a collection of portable, high-performance ANSI-C
implementations of pseudorandom number generators such as linear
congruential, inversive congruential, and explicit inversive
congruential random number generators (LCG, ICG and EICG, respectively)
created by Otmar Lendl and Josef Leydold.
2010-02-19 13:56:53 +00:00
schmonz
04f00860a1 Make x11 support optional, default off. Bump PKGREVISION. 2010-02-19 08:33:28 +00:00
drochner
a55155126f +gnumeric110 2010-02-18 21:03:31 +00:00
drochner
fe1a02e57e add gnumeric-1.10.0 which is the first of a new release branch,
while it is an official stable release it is still .0 so better
keep 1.8 in parallel (first impression: it lacks its desktop icon)
2010-02-18 21:00:43 +00:00
joerg
03b66c3e4b Deal with two digit R --version output. Still mark as broken because it
depends on a no-longer existing header.
2010-02-15 16:32:20 +00:00
sno
4ce1896872 Bumping revision to force rebuild after missing declaration has been fixed
in math/pari.
2010-02-12 18:19:40 +00:00
sno
12a2adcda7 Updating math/pari from 2.3.5 to 2.3.5nb1
- Math::Pari requires one more function declaration from src/language/anal.h
  (moved into src/headers/paripriv.h, too)
2010-02-12 18:18:29 +00:00
asau
677bae066b Update to Octave 3.2.4, this is bug fixing release.
pkgsrc changes: fix shared library versions.
2010-02-12 00:41:48 +00:00
joerg
429e956b3f Bump revision for PYTHON_VERSION_DEFAULT change. 2010-02-10 19:17:31 +00:00
adam
062a6e8899 Changes 2.10.1:
* The PCRE library has been updated to version 8.00.
* R CMD INSTALL has new options --no-R, --no-libs, --no-data,
  --no-help, --no-demo, --no-exec, and --no-inst to suppress
  installation of the specified part of the package.
* The documented line-length limit of 4095 bytes when reading
  from the console now also applies also to parse(file="")
  (which previously had a limit of around 1024 bytes).
* A Bioconductor mirror can be set for use by setRepositories()
  via the option "BioC_mirror".
* Double-clicking in a tk_select.list() list box now selects the item
  and closes the list box (as happens on the Windows select.list() widget).
* configure will be able to find a usable libtiff in some rare
  circumstances where it did not previously (where libtiff
  needed to be linked explicitly against -ljpeg).
* Making refman.pdf works around a problem with the indexing
  with hyperref 6.79d and later.
* The 'extended' argument is deprecated in strsplit(), grep(),
  grepl(), sub(), gsub(), regexpr() and gregexpr() (not just the
  value extended = FALSE) and will be removed in R 2.11.0.
* bug fixes
2010-02-09 07:02:53 +00:00
obache
15addff919 Update py-mpmath to 0.14.
per update request from Wen Heping by PR#42755.

Pkgsrc changes:
* Set LICENSE
* correct EOL style of installed files
* Add self-test target

Changes:
--0.14--
Released February 5, 2010

General changes:

* Fully separated the code into "low-level" and "high-level", permitting the
  use of alternative contexts (the mpmath.mp object provides the default
  implementation)
* Implemented a context for fast double-precision arithmetic using Python
  types (mpmath.fp)
* Implemented hooks for importing a faster version of mp arithmetic from Sage
* Implemented optimized fp versions of certain functions (including erf, erfc,
  gamma, digamma, ei, e1)
* Renamed and reorganized various internal modules and methods (including
  merging low-level modules into mpmath.libmp). This should not affect most
  external code using top-level imports.

Plotting:

* Implemented splot() for 3D surface plots (contributed by Jorn Baayen)
* Permit calling plot functions with custom axes (contributed by Jorn Baayen)

Matrices:

* Fixed lu_solve for overdetermined systems (contributed by Vinzent Steinberg)
* Added conjugate matrix transpose (contributed by Vinzent Steinberg)
* Implemented matrix functions (expm, cosm, sinm, sqrtm, logm, powm)

Miscellaneous:

* Prettier printing of numbers with leading zeros at small precisions
* Made nstr pass on kwargs, permitting more formatting options
* Fixed wrong directed rounding of addition of numbers with large magnitude
  differences
* Fixed several docstring typos (contributed by Chris Smith)
* Fixed a bug that prevented caching of quadrature nodes to work optimally.

Special functions:

* Implemented fast evaluation for large imaginary heights of the Riemann zeta
  function, Z function and derived functions using the Riemann-Siegel
  (contributed by Juan Arias de Reyna)
* Unified the zeta() and hurwitz() functions, automatically selecting a fast
  algorithm
* Improved altzeta() to fall back to zeta() for large arguments
* Fixed accuracy of zeta(s) for s ~= 1
* Implemented exact evaluation of Euler numbers (contributed by Juan Arias
  de Reyna)
* Implemented numerical evaluation of Euler numbers and Euler polynomials
  (eulernum(), eulerpoly())
* Fixed bernpoly() and eulerpoly() to compute accurate values for large
  parameters
* Fixed accuracy problems for hypergeometric functions with large parameters
* Faster evaluation of hypergeometric series using on-the-fly code generation
* Optimized hypercomb to detect certain zero terms symbolically
* Removed the djtheta function (jtheta() accepts a derivative parameter)
* Implemented li(x, offset=True) to compute the offset logarithmic integral
* Fixed wrong branch in Lambert W function for certain complex inputs
* Implemented the reflection formula for the Barnes G-function,
  superfactorials, hyperfactorials, permitting large arguments in the left
  half-plane
* Implemented analytic continuation to |z| >= 1 for hypergeometric functions
  pFq with p=q+1; added hyp3f2()
* Implemented Borel summation of divergent pFq functions with p > q+1
* Implemented automatic degree reduction of hypergeometric functions with
  repeated parameters
* Added convenience functions expj(), expjpi()
* Use Mathematica's convention for the continuation of the Meijer G-function
* Added phase(), polar(), rect() functions for compatibility with the
  Python 2.6 cmath module
* Implemented spherical harmonics (spherharm())
* Optimized ci(), si(), chi(), shi() for complex arguments by evaluating
  them in terms of ei()
* Optimized hyp2f1 for z ~= -1
2010-02-08 11:54:25 +00:00
zafer
eee43c584d add license. 2010-02-07 18:36:33 +00:00
taca
ab028c963e Update pear-Numbers_Words from 0.14.0 to 0.16.1.
0.16.1

* Clean up package definition and tests;
* Better cast/sanitation of non-integer values;
* Fixed bug #16019 (incorrect trimming of vowels in the Italian extension).

0.16.0

* Added numerous language unit tests (Bulgarian, English 100, English GB,
  English US, French, French Belgium, German, Italian, Portuguese Brazilian);
* Swap all tests to PHPUnit 3;
* Bugs fixed:
  - #10744 wrong getLocales() Docblock;
  - #14988 bogus non-int parsing;
  - #14667 bad trascription for 101 numbers and 102 thousands bug;
  - incorrect values for 80 and 81 in French Belgium;
  - #15260 uninitialized string offset in Brazilian Portuguese.

0.15.0

* New file for Dutch language (Thanks to WHAM van Dinter);
* package.xml updated to version 2.0;
* Bugs fixed:
  - #5618 locale name (and file name) for Estonian is changed from ee to et;
  - #6654 bug in Russian translation;
* New feature added:
  - #7339 new Numbers_Words::getLocales() method is available (Thanks to
    Bertrand Gugger).
2010-02-06 15:55:52 +00:00
taca
1c23fca74c Updaet pear-Numbers_Roman from 0.2.0 to 1.0.2.
1.0.2

QA release:
- Fix bug with _L and _C giving wrong values (swapped)
- Fix bug: toRoman() used $this although it's static
- Add unit tests

1.0.1

- Added support for lowercase input/output
- Starting with this release conversion is supported from integers up to
  5 999 999 and from the equivalent Roman Numerals
- Added an optional HTML tag to disply roman numerals over 4000 in an
  historically accurate fashion
- General fixes and code rewrite maintaining backward compatibility
2010-02-06 15:55:13 +00:00
sno
46963503e3 Updating math/p5-Math-Pari from 2.010801nb2 to 2.010806.03
pkgsrc changes:
- Avoid private compile of pari-library, use pkgsrc provided instead
- Add license definition
- Disabled support for plotting from perl (missing upstream support)

Upstream changes:
2.01080601+
  Add 5.005-new keywords to Makefile.PL.
  Consistently put space after -I in C include paths (needed???).
  Nicer output when debugging faulty LWP and Net::FTP.
  Make test engine look in */32/* directory too on 64-bit builds.
  Remove POD ornaments to make ABSTRACT_FROM work.

2.01080601++
  Reword warning about slow intnum: only 75% longer than on PARI/GP.
	(overhead of the internal sub call in subtest 30 looks like 10x
	 overhead of an empty subroutine call).
  New advice that upgrade to 2.3.* may fix `overflow' and `highremainder'.
  Exchange order of initialization of PARI and of `functions_highlevel'
	with >= 2.3.0; allows installation of highlevel functions
	(in particular, install() and PostScript printing).
  New function have_graphics() (not exported).
  The test engine takes into account have_graphics().

2.01080602
  If AUTOMATED_TESTING, delete (bogus?) environment variable DISPLAY.
  If AUTOMATED_TESTING, report results of failing tests on STDERR.
  Make test suite report rough run times for successful subtests.

2.01080603
  Fix misprint and change die() to warn() on failure of $ftp->quit...
  Add some void's in Pari.xs.
  UNDONE (wrong): Protect init_graph() by NO_GRAPHICS_PARI (in restart code);
    include rect.h instead...
  sv2pari(),sv2parimat(): a stupid compiler might guess we don't return value...
  when patching, use && instead of ; in the shell command
  New function Math::PariBuild::patch_args()
  Math::PariBuild::patch_pari() supports option --binary, \ as directory
   separator in command processor.
  Make uname parser recognize i686-pc as ix86.
  Generator of function descriptors could try to regenerate existing file.
  nok_print() in Testout.pm was defined too late.
2010-02-06 10:52:37 +00:00
sno
fe631fa237 Updating math/pari from 2.1.6nb3 to 2.3.5 (newer than PR pkg/38116)
pkgsrc changes:
- Adding license (GPLv2)
- Adding X11 and GMP support (latter via option)
- Adding patches to support math/p5-Math-Pari can be build without
  rebuilding pari again

Upstream changes:
* Primarily a lot of bug fixes
* Plotting API reworked
* More targets are supported
2010-02-06 10:37:06 +00:00
joerg
2e075cf178 DESTDIR support 2010-02-04 14:51:44 +00:00
wiz
e3796d62cb + wxMaxima. 2010-02-03 23:39:33 +00:00
drochner
cf4aba0aed + 2 calculators 2010-02-03 14:14:05 +00:00
drochner
2a023fa9ad add speedcrunch-0.10.1, another desktop calculator 2010-02-03 14:09:17 +00:00
drochner
93b4b39deb add extcalc-0.9.2, another desktop calculator
(I had this in my tree for a while but found the UI too complex to
be handled intuitively. But now it appeared on a list of
"the 7 best Linux calculators", so perhaps it is just me...)
2010-02-03 14:05:01 +00:00
heinz
ada7853bdc Added LICENSE information. 2010-01-30 16:27:59 +00:00
drochner
b91ba669e7 update to 1.4.0
changes:
- Faster import time
- Extended array wrapping mechanism for ufuncs
- New Neighborhood iterator (C-level only)
- C99-like complex functions in npymath, and a lot of portability
  fixes for basic floating point math functions
2010-01-27 20:48:20 +00:00
drochner
f609d0fd63 update to 0.6.6
many fixes and improvements, too much to list here
2010-01-27 14:21:19 +00:00
drochner
18642e3e03 +py-mpmath 2010-01-27 14:17:33 +00:00
drochner
5e50301277 add py-mpmath-0.13, a Python library for arbitrary-precision FP arithmetic 2010-01-27 14:16:10 +00:00
seb
ccc0ec3377 Update p5-Spreadsheet-WriteExcel from version 2.35 to version 2.36.
Pkgsrc changes:
- Adjust dependencies.

Upstream changes:
2.36 January 21 2010 - Minor

   ! Fix for bug that gave a name conflict error for repeat rows and
     autofilters in some non-English versions of Excel.
     http://rt.cpan.org/Public/Bug/Display.html?id=38099

   ! Fixed tab selection for Charts.

   + Added xl_range_formula() to Spreadsheet::WriteExcel::Utility to
     help with creating chart ranges. Added example to Chart docs.

   + Added set_legend() method with initial legend formatting options.

   + Documented Worksheet methods that are applicable to Charts.
2010-01-25 22:19:39 +00:00
seb
0a1ca76e4e Update p5-Spreadsheet-Read from version 0.37 to version 0.38.
Pkgsrc changes:
- Adjust dependencies

Upstream changes:
0.38	Tue 15 Dec 2009

    - Add row () and cellrow ()
    - Updated META.yml to meet most recent specs (optional_features = map)
2010-01-25 21:49:30 +00:00
seb
d581f34461 Update from version 0.5500 to version 0.5700 (upstream 0.57)
Pkgsrc changes:
- Adjust dependencies.
- Change PERL5_MODULE_TYPE to MakeMaker.

Upstream changes:
0.57 January 24 2010

    ! Added fix for reading formatted data from Excel 4 files.

    ! Added example programs, a_simple_parser.pl and
      display_text_table.pl.

    ! Removed Build.PL from README. Thanks Ed Avis.
      https://rt.cpan.org/Ticket/Display.html?id=52670


0.56 November 9 2009

    + Added error() and error_code() error handling routines.
      This allows encrypted files to be ignored.
      Added t/10_error_codes.t for the above methods.
      http://rt.cpan.org/Public/Bug/Display.html?id=51033
      http://rt.cpan.org/Public/Bug/Display.html?id=47978

    ! Made version 0.19 of OLE::Storage_Lite a prerequisite to avoid
      issues when writing OLE header in SaveParser.
2010-01-24 23:37:24 +00:00
is
4c400acdea Don't depend on accidental line buffering. 2010-01-23 23:27:55 +00:00
is
5c9f2374bc Make "make test" less confusing (stdout/stderr reordering issue). 2010-01-23 23:21:45 +00:00
asau
d6ddd07d3a Update to FriCAS 1.0.9
Notable changes (compared to version 1.0.8) include:

- Speed improvements to polynomial multiplication, power series
  multiplication, guessing package and coercion of polynomials
  to expressions.
- Domains for tensor products.
- 'Complex(Integer)' is now  UniqueFactorizationDomain.
- Types in interpreter are now of type 'Type' (instead of 'Domain')
  and categories in interpreter are of type 'Category' (instead of
  'Subdomain(Domain)').
- Interpreter functions can now return 'Type'.
- New function for files: 'flush'.
- Spad compiler: return in nested functions and nested functions
  returning functions.

Bug fixes, in particular:

- Several fixes to guessing package.
- Avoid crash when unparsing equations.
- Equation solver accepts more solutions.
- Fixed handling of 'Tuple' in Spad parser.
- Fixed miscompilation of record constructor by Spad compiler.
2010-01-23 02:11:40 +00:00
is
bbcc82b0bc Upgrade to new upstream version. While here, add a test target. 2010-01-21 13:50:55 +00:00
drochner
fc439459f6 update to 1.0.9
changes:
-Fix matrix expansion.  This also fixes AuxilliaryUnitMatrix and
 JordanBlock.
-Fix several possible crashers.
-Fix a minor memory leak.
2010-01-20 17:16:38 +00:00
wiz
39df6d7b2e Update to 2.35:
2.35 January 10 2010 - Major

    + Added support for Stock charts.

    + Added support for Scatter charts.

    + Improved Pie chart examples.


2.34 January 8 2010 - Major

    + Added support for Pie charts.

    ! Re-added index.html in docs dir for Debian (and others).
      http://rt.cpan.org/Public/Bug/Display.html?id=53346

    ! Fix for incorrectly encoded string result in repeat_formula().


2.33 January 3 2010 - Major

    + Added support for embedded charts. See insert_chart().


2.32 December 31 2009 - Major

    + Added support for native charts. See Charts.pm.
      Column, Bar, Line and Area charts supported.

    ! Fixed Apache2::Const vars in mod_perl2.pl example.
      Thanks to Ryan Perry.


2.31 December 10 2009 - Minor

    ! Fixed resources in Makefile.PL.

    ! Updated screenshots of example programs.


2.30 November 25 2009 - Minor

    ! Updated Pod generator to include screenshots of example programs.


2.29 November 25 2009 - Minor

    ! Made version 0.19 of OLE::Storage_Lite a prerequisite to avoid
      issues when using set_properties with Win 7 or Gnumeric.


2.28 November 22 2009 - Minor

    ! Fix to NAME section in Example.pm to get CPAN to generate pod docs
      for it.


2.27 November 21 2009 - Minor

    + Added autogenerated Examples.pm.


2.26 November 13 2009 - Minor

    + Beta release of defined names.

    ! Fix for fuzzy images issue reported by Todd Eigenschink.
    + Added 25_position_object.t tests to cover above issue.

    ! Fixed bug where file size wasn't found for progressive JPEGs.
      Reported by Yamashita Junji and Bruce Anderson II.

    + Added set_country() method.

    ! Fix for UTF8 strings passed to write_url().
      Reported by Jon Schutz.
      http://rt.cpan.org/Public/Bug/Display.html?id=41048

    ! Fixed very minor issue with unitialised value for top
      border colour in formats. Reported by Franz Fasching.
2010-01-20 15:14:36 +00:00
wiz
7e9f949650 Second try at jpeg-8 recursive PKGREVISION bump. 2010-01-18 09:58:37 +00:00
wiz
672ef23395 Recursive PKGREVISION bump for jpeg update to 8. 2010-01-17 12:02:03 +00:00
tnn
075cc41643 fix build issue with Sun Studio. It doesn't like void values as operators
to ternary expressions, even when the result is discarded.
While here, update to nickle-2.69. Only difference seems to be that
configry is generated with newer autotools.
2010-01-15 23:09:28 +00:00
asau
73e9794d27 Update to MPFR 2.4.2-p3.
Previously used cumulative patch is no longer distributed,
replace it with individual patches.
It is hard to tell what the patch level was before.
2010-01-15 14:04:36 +00:00
joerg
1ae5842f88 Tends to go into infinite loops on 64bit platforms as confirmed on
AMD64, SPARC64 and Alpha by various bulk builders.
2010-01-06 18:24:12 +00:00
joerg
98b1411dd9 Update to PSPP 0.6.2. Fixes a few bugs and adds some new translations
Updated during freeze as it is required to building against GTK+ 2.17.4
and later.

From asau@
2009-12-30 13:33:27 +00:00
adam
d0d4aced25 patch-ae is not needed any more 2009-12-24 19:25:04 +00:00
joerg
66da4fa38e Needs C and Fortran. From PR 42506. 2009-12-23 23:38:46 +00:00
asau
0055dcb97f Skip checks until better solution found. 2009-12-23 17:17:35 +00:00
drochner
e0c5f215c8 fix build: libtoolization missed to link against required libraries 2009-12-22 17:46:17 +00:00
joerg
f8f6e0475c Fix DESTDIR installation. Simplify. 2009-12-21 20:10:17 +00:00
adam
b9681eca5e This should have been imported along with R-2.10.0; oops 2009-12-21 11:51:19 +00:00
asau
579c2e1933 Update to Maxima 5.20.1.
Approved by <agc>.


   Backwards-incompatible changes:

 * removed package jtroot3 (superseded by bfallroots)

 * internal symbols of specint replaced by more descriptive names:

    %f         --> hypergeometric
    %e         --> elliptic_ec
    %kelliptic --> elliptic_kc
    %p[a,b,c]  --> jacobi_p
    %p[a,b]    --> assoc_legendre_p
    %p[a]      --> legendre_p
    %q[a,b]    --> assoc_legendre_q
    %q[a]      --> legendre_q
    hstruve    --> struve_h
    lstruve    --> struve_l
    %d         --> parabolic_cylinder_d
    %m         --> whittaker_m
    %w         --> whittaker_w
    %ei        --> expintegral_ei
    %h[n,x]    --> hankel_1 and hankel_2
    %he        --> hermite


   New items in core:

 * general mechanism for functions to distribute over operators
   (distribute_over declaration)


   Other revisions:

 * improved Laplace transforms of special functions

 * assume database:

   The inferences between the declarations of variables as integer,
   real, complex, .. have been cut out. The constant %i is declared
   to be imaginary. The constants %pi, %e, %gamma, %phi are declared
   to be real.

   The database handles expressions with constants more completely.
   Facts like assume(x < %pi/2) are now handled correctly.

   The sign of sums of constant expressions is determined more
   correctly.

   Askinteger take into account more facts from the database.

 * improvements of special functions:

   More functionality for the Hankel 1 and 2 functions:
   Expansion for a half integral order has been implemented.

   More consistent numerical evaluation of Bessel and Hankel functions.

   More general integrals for Bessel functions and implementation of
   integrals for the Airy functions.

   Gamma function accepts a Taylor expansion as an argument.

   Implementation of Struve H and L functions:
   Numerical evaluation for real and complex numbers in float and
   bigfloat precision. Handling of specific values. Derivatives of the
   functions and expansion for a half integral order is implemented.

   Adding mirror symmetry for the Airy functions.

   Improving the limits of the log and factorial functions.

 * package fft: revised for greater speed
 * package to_poly_solver: improvements
 * regularize error and warning messages, and translate via gettext (ongoing)
 * bug fixes and other improvements in plotting code
 * bug fixes in translator


   Bug fixes:

   2906049: integration failure with option integrate_use_rootsof :true
   2901855: limit(sqrt(x),x,minf) not fully evaluated
   2886564: conjugate(atan2(y,x)) not simplified
   2882408: solve_rat_ineq returns false answers
   2876387: ode2 asks if sqrt(3) is an integer
   2876284: nicedummies of subscripted
   2876277: hgfred([3/2,-2],[5/2],-x) not fully simplified
   2873057: incorrect version is reported in manual front page
   2872605: abs_integrate bug
   2872505: Assume database inconsistent after reset()
   2847387: hgfred([3/2,-b],[5/2],-1) bogus
   2843705: limit of psi[i]
   2842198: next_prime speed improvement
   2842060: unsimplified result from integrate
   2841504: Limit of the factorial function - 4 problems
   2840566: defint fails to determine if one of its limit is real
   2836339: unsimplified negation
   2835634: logcontract broken
   2835098: SIGN-PREP strangeness
   2834336: ratsimp vs facsum
   2824360: missing bug reporting node in manual's detailed menu
   2808568: Reserved words that aren't reserved
   2802006: integrate(1/(sqrt(x)+1), x, 0, 1);
   2770575: rtestsum test 226
   2636628: solve_rat_ineq doesnt find all soloutions
   2609426: integrate(cos(a)/sqrt((tan(a))^2+1), a,-%pi/2,%pi/2);
   2148461: docs for factor refer to "the field of integers"
   2018842: unsimplified result from jacobi_p
   1977146: radexpand does not work as explained in documentation
   1725951: unsimplified boolean
   1646397: listofvars includes true
   1551310: mod and floor should distribute over matrix and list
   1038624: askinteger ignores asksign database
    840360: qunit(4) internal errors
    831163: part(x) should give warning
    816797: limit(%i*log(a),a,0) nounform (%i*und problem)
    788892: zeroa handled inconsistently
    752067: Can't untrace ?meval
    706455: Should powerseries do Laurent expansions?
    652470: Pickapart error (due to MEMSIMILAR)
    640332: Need to specdisrep more systematically
    627759: Ratdisrep of aggregates
2009-12-20 22:49:39 +00:00
drochner
ec832fe824 update to 2.28.2
changes:
-Fix negative exponential detection
-Only disable trailing zeroes option in basic mode
-Disable ambiguous multiplication with Eulers number, e.g. "2e" as this
 makes exponential numbers confusing
2009-12-16 17:56:53 +00:00
drochner
4fb08b5cc4 use PYVERSSUFFIX, fixes Python!=2.5 2009-12-16 16:59:48 +00:00
asau
814256a5b7 Dragonfly hack is no longer needed. 2009-12-16 01:58:08 +00:00
asau
dd0873c0ea Update to OpenAxiom 1.3.0
Changes since previous release:

Compiler

  - The compiler now treats ^ as alias for **.
  - The compiler now rejects ambiguous left hand sides of
    definitions where parameter types are left out for
    inference. Previously, the compiler would pick the first
    signature from some mostly random order, with a warning.
  - For categories with default implementations, the compiler
    can be directed to compile only the purely category part
    (exports), or only the default implementations (category
    packages).
  - The compiler now supports a Foreign Function Interface. In
    particular, signatures for external entities may be declared
    at capsule level. Currently, only ISO C functions are
    supported, but future releases may support ISO C++ and other
    mainstream languages.
  - The parsing of signature for operators has been improved.
    Previously, operator names needed to be quoted in signature.
    That is not longer needed. For instance, previously, one had
    to write (at category level)

                       "*": (%,%) -> %
                       _/_\: (%,%) -> %
                       _not: % -> %

    With this release of OpenAxiom and onward, one can simply write

                       *: (%,%) -> %
                      /\: (%,%) -> %
                     not: % -> %

    which is much simpler to read, write, and much more regular.
  - The compiler now supports is-case pattern matching. The new
    pattern matching syntax is useful for structuring retractions,
    and also for domain recovery from expressions of type Any.
  - The compiler now supports the loop control transfer operator
    iterate in repeat loops - previously, the construct was
    accepted only in scripts (not libraries). That discrepency is
    now ended.


Interpreter

  - Declared variable with no specified values are now handled
    as if symbolic value with a specified type.
  - The interpreter now parses a disjunctive expression
    involving the 'is' operator the obvious way. E.g. Now

                T is Integer or T has Ring

    is now understood as

                (T is Integer) or (T has Ring)

  - The interpreter now handles existentially quantified or
    universally quantified expressions


Algebra

The following types have been added to OpenAxiom-1.3.0

  - The domain Boolean and category BitAggregate no longer
    export the operation ^ for logical negation. Use the
    operator not which is the canonical and documented operator.
  - The domain InputForm now has a new exported signature

                     parseString: String -> %

    for parsing expressions given as string.
  - The domain Boolean now belongs to the category
    OrderedFinite.
  - The domain KleeneTrivalentLogic is added. It implements
    Stephen Kleene's 3-valued propositional logic.
  - For file orinted I/O, new domains have been added:
      + IOMode: This domains defines three constants to indicate
        the direction of file I/O operations.
      + InputBinaryFile: This domains implements the basic input
        operations on binary files.
      + OutputBinaryFile: This domains implements the basic
        output operations on binary files.
  - The domain BinaryFile has been replaced by three specific domains:
      + InputBinaryFile: datatype for input file open in binary mode;
      + OutputBinaryFile: datatype for output file open in binary mode;
      + InputOutputBinaryFile: datatype for input and output file open
      	in binary mode.
  - Three new categories are introduced, related to conversions:
      + CoercibleFrom: This category is the mirror image of the
        standard category CoercibleTo.
      + HomotopicTo: This category is the symmetrization of the
        category CoercibleTo.
      + ConvertibleFrom: This category is the mirror image of
        ConvertibleTo.
  - Previous releases defined instantiations of the domain
    constructor Expression as satisfying the category OrderedSet.
    That was both confusing and incorrect in conjunction with
    other algebraic structures. From now on, Expression(T) no
    longer satisfies OrderedSet.
  - Three new categories have been added:
      + LeftLinearSet
      + RightLinearSet
      + LinearSet
    The category AbelianGroup extends LeftLinearSet Integer.
    The parameterized category constructor LeftModule extends
    LeftLinearSet. Similarly, the category RightModule extends
    RightLinearSet.
  - The domain Any has been reworked. In particular, the
    operation domainOf, objectOf, and showTypeInOutput have been
    removed. Equality of two objects of domain Any is equality
    according to the underlying domain, if that domain belongs to
    the category BasicType; otherwise, it is equality of storage
    locations.

Runtime System

  The Lisp backend now uses type information derived from exports
  and domain representation for code generation purposes.
2009-12-16 01:54:13 +00:00
asau
09c72874f6 Update to FriCAS 1.0.8
Notable changes (compared to version 1.0.7) include:

  - Improved version of guessing package.  It can now handle
    much larger problems than before.  Added ability to guess
    functional substitution (Mahler) equations.
  - Experimental support for build using CMU CL.
  - Various speed improvements including faster indexing for two
    dimensional arrays.
  - By default FriCAS build tries to use SBCL.
  - Building no longer require patch.

Bug fixes, in particular:

  - correct definition of random() for matrices
  - conditionals in .input files work again
  - Spad compiler now recognizes more types as equal
  - fixed problem with pattern-matching quote
2009-12-15 23:36:28 +00:00
drochner
d3da033270 don't propagate guile dependency, it is only used at build time 2009-12-15 23:27:17 +00:00
joerg
a0e6713ee7 Recursive bump for libltdl 2009-12-15 21:54:17 +00:00
wiz
e8a13f00d1 Set LICENSE. 2009-12-15 12:36:50 +00:00
wiz
0e1ae43a9d Update to 2.4.2:
Changes from version 2.4.1 to version 2.4.2:
- Security fix in formatted output functions (buffer overflow).
- Formatted output functions: 6 is now the default value for
  empty precision field with %Rf.
- Better portability of configure script.
- Detection of intmax_t and uintmax_t types.
- Improved documentation: mpfr_get_z_exp, mpfr_strtofr, mpfr_get_str and
  formatted output functions.
- Improved message in case of assertion failure.
- Test coverage: 97.0% lines of code.
- Updated tcmp_ld test to really test the long double.
- Some documentation files are installed in $docdir.
- Removed mpfr_init_cache (unused and undocumented function).
- Fixed the way $CC / $CFLAGS are got from gmp.h (__GMP_CC / __GMP_CFLAGS).
- Bug fixes.
- Also note that GCC 4.4.0 (only this obsolete version) does not build
  MPFR 2.4.2 correctly; this is detected by "make check" (failures in
  tget_z and tpow_all).
2009-12-15 12:35:57 +00:00
asau
c289c5f11d It does support staged installation. 2009-12-13 02:01:27 +00:00
asau
2e045c8460 Support staged installation. 2009-12-12 21:58:18 +00:00
asau
448e342edf Home page moved.
Support staged installation.
2009-12-12 20:56:54 +00:00
asau
e389c3e730 Support staged installation. 2009-12-12 20:39:56 +00:00
asau
82386b2c27 Support staged installation. 2009-12-12 20:22:01 +00:00
asau
0cee6884cc Support staged installation. 2009-12-12 20:11:24 +00:00
asau
72aed07362 Support staged installation. 2009-12-12 19:43:41 +00:00
asau
e4ee570206 Support staged installation. 2009-12-12 19:19:00 +00:00
drochner
014591198f +xylib 2009-12-12 14:02:21 +00:00
drochner
ae7697a371 add xylib-0.4, a library for reading powder diffraction data
(needed by "fityk")
2009-12-12 13:58:58 +00:00
asau
c2f5a415b6 MAKE_JOBS_SAFE=no 2009-12-12 12:27:33 +00:00
drochner
8d2d98f648 +fityk,muparser 2009-12-11 21:56:29 +00:00
drochner
fd1944eeb6 add fityk-0.8.9, a peak fitting program 2009-12-11 20:44:38 +00:00
drochner
725a6108e0 add muparser-130, a parser for mathematical expressions 2009-12-11 19:53:57 +00:00
adam
cada3ae98d Removed R-Matrix 2009-12-11 19:48:33 +00:00
adam
e964c98602 R-Matrix is now a part of R distribution 2009-12-11 19:48:08 +00:00
adam
93afa78832 Added R-randomForest, R-e1071, R-classInt 2009-12-11 19:46:27 +00:00
adam
da42eba854 Wrong path in Makefile 2009-12-11 19:45:46 +00:00
adam
eb6128da08 Update to the latest version of the module along with R update 2009-12-11 19:36:55 +00:00
adam
6dd2c472f5 Update to the latest version of the module along with R update 2009-12-11 19:26:24 +00:00
adam
d04b44c84a Added USE_LANGUAGES 2009-12-11 19:25:33 +00:00
adam
d8a17a845f Update to the latest version of the module along with R update 2009-12-11 19:23:06 +00:00
adam
7ed6e36424 Update to the latest version of the module along with R update 2009-12-11 19:18:17 +00:00
adam
e2b8d915b9 Update to the latest version of the module along with R update 2009-12-11 19:14:36 +00:00
adam
2a8ab4ed1a A package for choosing univariate class intervals for mapping or other graphics
purposes.
2009-12-11 19:11:00 +00:00