The canonical form [1] of an R package Makefile includes the
following:
- The first stanza includes R_PKGNAME, R_PKGVER, PKGREVISION (as
needed), and CATEGORIES.
- HOMEPAGE is not present but defined in math/R/Makefile.extension to
refer to the CRAN web page describing the package. Other relevant
web pages are often linked from there via the URL field.
This updates all current R packages to this form, which will make
regular updates _much_ easier, especially using pkgtools/R2pkg.
[1] http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html
Each R package should include ../../math/R/Makefile.extension, which also
defines MASTER_SITES. Consequently, it is redundant for the individual
packages to do the same. Package-specific definitions also prevent
redefining MASTER_SITES in a single common place.
Changes:
- Updated to version 3.3.4 of Eigen
- Condition long long use on C++11.
- Pragmas for g++ & clang to suppress diagnostics messages are
disabled per CRAN Policy; use -Wno-ignored-attributes to quieten.
Add blas and lapack as DEPENDS
Upstream changes:
2017-11-19 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION (Version, Date): Release 0.3.3.3.1
* R/inline.R: Use '::' not ':::' for Rcpp.plugin.maker
2017-08-26 Dirk Eddelbuettel <edd@debian.org>
* .travis.yml (before_install): Use https for curl fetch
2017-06-06 Yu Gong <armgong@yahoo.com>
* inst/include/unsupported/Eigen/src/SparseExtra/MatrixMarketIterator.h:
Also permit compilation under Haiku-OS
2017-05-28 Dirk Eddelbuettel <edd@debian.org>
* inst/examples/lmBenchmark.R (do_bench): Remove spurious argument in
call to RcppEigen:::Eigen_SSE() (cf github issue #44)
2017-04-29 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.3.3.3.0
[ which again owes a very big thank you to Yixuan for doing the work! ]
2017-04-27 Dirk Eddelbuettel <edd@debian.org>
* .travis.yml: Switch to using run.sh for Travis CI
2017-04-27 Yixuan Qiu <yixuan.qiu@cos.name>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen/src/Core/arch/CUDA/Half.h: Fixed compiler warning
on 'long long' type in C++ 98 mode
2017-03-14 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION (Version, Date): Release 0.3.2.9.1
* src/init.c (R_init_RcppEigen): Call R_registerRoutines()
and R_useDynamicSymbols()
* NAMESPACE: Use .registration=TRUE on useDynLib
* R/fastLm.R (fastLmPure): Remove erroneous fourth argument from .Call
2017-03-13 Martin Maechler <maechler@r-project.org>
* inst/include/RcppEigenCholmod.h: Synchronize with Matrix package
2017-02-21 Yixuan Qiu <yixuan.qiu@cos.name>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen: Updated to release 3.3.3 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* README.md: Idem
2017-01-20 Yixuan Qiu <yixuan.qiu@cos.name>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen: Updated to release 3.3.2 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* README.md: Idem
* inst/unitTests/runit.RcppEigen.R, inst/unitTests/runit.sparse.R:
Explicitly convert matrix size to `double` type such that Rcpp can
properly return the value to R, thanks to ChingChuan and Dirk
2017-01-20 ChingChuan Chen <zw12356@gmail.com>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen: Updated to release 3.3.1 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* inst/examples/lmBenchmark.R: Fixed function names
2016-12-22 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION (URL, BugReports): Added / updated
2016-11-12 Yixuan Qiu <yixuan.qiu@cos.name>
[ In RcppEigen 0.3.3.* branch ]
* inst/include/Eigen: Updated to release 3.3.0 of Eigen
* inst/include/unsupported: Idem
* DESCRIPTION: Idem
* README.md: Idem
* inst/include/RcppEigenForward.h, inst/include/RcppEigenWrap.h:
Added exporters for the new Map<SparseMatrix<T> > type
* inst/unitTests/runit.sparse.R: Unit tests for the new type
2016-08-20 Dirk Eddelbuettel <edd@debian.org>
* DESCRIPTION: Release 0.3.2.9.0 with big thanks to Yixuan for doing
the work!
2016-08-19 Yixuan Qiu <yixuan.qiu@cos.name>
* inst/include/Eigen: Updated to release 3.2.9 of Eigen
* README.md: Updated version number and fixed the NOTE from CRAN URL
check
2016-04-30 Dirk Eddelbuettel <edd@debian.org>
* README.md: Expanded
2016-04-28 James Joseph Balamuta <balamut2@illinois.edu>
* inst/include/RcppEigenWrap.h: Added an exporter class for
Map::RowVectorX<t> per http://stackoverflow.com/questions/36920689/
* inst/include/unitTests/runit.RcppEigen.R: Added row exporter unit
test.
R and Eigen integration using Rcpp. Eigen is a C++ template library
for linear algebra: matrices, vectors, numerical solvers and related
algorithms. It supports dense and sparse matrices on integer,
floating point and complex numbers, decompositions of such matrices,
and solutions of linear systems. Its performance on many algorithms
is comparable with some of the best implementations based on Lapack
and level-3 BLAS. The RcppEigen package includes the header files
from the Eigen C++ template library (currently version 3.2.2).
