Commit graph

294912 commits

Author SHA1 Message Date
wen
6ba3783c89 Updated devel/p5-Data-UUID to 1.224 2019-03-16 23:28:17 +00:00
wen
5c5b5fa9e2 Update to 1.224
Upstream changes:
1.224     2019-03-02
  - No changes since 1.223

1.223     2019-02-14 (TRIAL)
  - Use File::Spec to get tmpdir instead of hardcoding (thanks, Desmond
  Daignault)

1.222     2018-04-29 (TRIAL)
  - Properly quote C strings passed in DEFINE (thanks, Salvador Fadiño)
  - Fix memory leak by decreasing reference count (thanks, Daniel Spang)
2019-03-16 23:27:26 +00:00
wen
132e24b176 Updated devel/p5-Data-ObjectDriver to 0.17 2019-03-16 23:25:01 +00:00
wen
8668637d31 Update to 0.17
Upstream changes:
0.17 2019-03-12T04:24:20Z

    - Bump version

0.16 2019-03-07T07:07:14Z

    - Avoid SQL syntax error: column IN () (charsbar) #26
    - Add disconnect method explicitly to pass tests for windows (twata1) #25
2019-03-16 23:23:31 +00:00
wen
0b300ce038 Updated geography/py-obspy to 1.1.1 2019-03-16 23:14:22 +00:00
wen
5949ea0126 Update to 1.1.1
Upstream changes:
1.1.1: (doi: 10.5281/zenodo.1040770)

    General:
        Tests pass with numpy 1.14 (see #2044).
        Map plots now also work with matplotlib >= 2.2 (see #2089).
    obspy.core:
        UTCDateTime now raises a meaningful exceptions when passing invalid or
        out-of-bounds 'julday' during initialization (see #1988)
        Fix pickling of traces with a sampling rate of 0 (see #1990)
        read_inventory() used with non-existing file path (e.g. typo in filename)
        now shows a proper "No such file or directory" error message (see #2062)
        Fix Trace.times(type='matplotlib') being slow (see #2112)
        read_events() and read_inventory() now trial most common plugins first
        (QuakeML/StationXML, ...) in case of automatic file format detection (i.e.
        when file type was not explicitly specified, see #2113)
        Event instances with Origin instances that have do not have defined
        latitude/longitude attributes will no longer raise a TypeError when
        creating a string representation (see #2119 and #2127).
        Fix Stream.get_gaps() when a trace is completely overlapping another trace
        (see #2218).
        Fix Exception when comparing ComparingObjects (see #2220).
        Fix UTCDateTime.strftime() when year is <1900 on Python 2 (see #2167)
        Inventory objects are more convenient to create now. Network, station, and
        channel codes can now be optional. Additionally the source parameter of
        inventories must no longer be specified at init time (see #2307, #2314).
    obspy.clients.arclink:
        Raise a warning at import time that the ArcLink protocol will be
        deprecated soon (see #1987).
    obspy.clients.fdsn:
        Mass downloader: Priority lists are now correctly overwritten if channel
        and/or location are set (see #1810, #2031, #2047).
        A few fixes and stability improvements for the mass downloader (see
        #2081).
        Fixed routing startup error when running under certain locales (see #2147)
        Update the IPGP mapping (see #2268).
        Adding a mapping for the KNMI (see #2270) services.
    obspy.clients.nrl:
        Set input units of overall sensitivity to input units of first stage in
        NRL.get_response() (see #2248)
    obspy.geodetics:
        Fix the vincenty inverse calculation for equatorial lines (see #2282).
    obspy.imaging:
        Normalize moment tensors prior to plotting in the mopad wrapper to
        stabilize the algorithm (see #2114, #2125).
        fix some map plotting issues with cartopy and local projection (see #2193,
        #2204)
    obspy.io.ascii:
        Fixes an issue with the time representation (see #2165, #2179).
    obspy.io.cnv:
        Bugfix when phase_mapping is passed as argument when writing a Catalog
        object to CNV (see #2001)
    obspy.io.css:
        Fix automatic filetype detection (see #2160 and #2162)
    obspy.io.gcf:
        Fix reading stream ID for station/channel code in header (see #2289,
        #2311)
        Fix bitmask in getting compression code (see #2290, #2310)
    obspy.io.mseed:
        Ability to read files that have embedded chunks of non SEED data. (see
        #1981, #2057).
        Fix util.get_start_and_end_time returning sample rate = 0 when sample rate
        = 1 (see #2069)
        Avoid showing invalid warnings when guessing endian during parsing
        timestamps (see #1988)
        util.get_record_information() now works correctly for negative sampling
        rate factors and multipliers (see #2030, #2191).
    obspy.io.nordic
        Bug-fix for amplitudes without magnitude_hint (see #2021)
        Bug-fix for wavefiles with full path stripping (see #2021)
        Bug-fix for longitudes between -100 and -180 (see #2197)
    obspy.io.reftek:
        Fix problems reading some Reftek 130 files, presumably due to floating
        point accuracy issues in comparing timestamps. Internal representation of
        time stamps is changed to integer nanosecond POSIX timestamp (see #2036,
        #2038, #2105)
        Fix a bug that prevents reading files that have no data in first channel
        (see #2101)
    obspy.io.sac:
        Allow passing on the byteorder flag from the top-level obspy.read()
        function (see #2285, #2292).
    obspy.io.seiscomp:
        Fix inventory read when maxClockDrift is unset in SC3ML (see #1993)
        Fix the reading of FIR coefficients when multiple whitespaces in SC3ML
        (see #2259)
        Fix the reading of the poles and zeros when multiple whitespaces in SC3ML
        (see #2260).
        Fix reading files with zero sampling rates (see #2294 and #2293)
        Fix divide by zero error when parsing sc3ml files of zero sampling rage
        (see #2294).
    obspy.io.stationxml
        Allow writing of dates before 1900 also on Python 2 (see #2013, #2015).
        Write the UTC time zone specifier to all times (see #2015).
        Units of first response stage as well as unit response stages are now
        determined with some heuristics (see #2250, #2318).
    obspy.io.xseed:
        Third condition to split blockettes when reading RESP files. Now more
        forgiving for slightly different files (see #2170, #2189)
    obspy.signal:
        Allow singular COUNT units in evalresp (see #2003, #2011).
        Fix an evalresp issue in case of an analog PAZ stage zero denominator (see
        #2171 and #2190)
        PPSD: for safety reasons, raise an ObsPyException if trying to read a PPSD
        npz file that was written with a newer version of the npz representation
        than is used by current ObsPy version (see #2051)
        The ar_pick() trigger function now raises an error if the three data
        arrays don't have the same length (see #1801, #2148).
        fix a precision issue in AR picker in case of low amplitude input (see
        #2252 and #2253)
    obspy.taup:
        Fallback to linear slowness interpolation for very small and shallow
        layers (see #2126, #2129).
        Fix bug preventing constant-velocity models with discontinuities at every
        layer boundary from being built (see #2264).
        More robust resize method so TauPy now works properly on Python 3.7 (see
        #2280, #2319).
2019-03-16 23:12:54 +00:00
gutteridge
6dd2b3fcd8 meta-pkgs/mate: amend required version of mate-themes
mate-themes uses an entirely different versioning scheme than the rest
of MATE does, so reflect that here for clarity.
2019-03-16 17:58:22 +00:00
jklos
dc2ced7e5e Updated www/wordpress to 5.1.1 [jklos 2019-03-16] 2019-03-16 17:57:09 +00:00
jklos
382c50036d Update Wordpress to 5.1.1 due to security issue outlined here:
https://wordpress.org/news/2019/03/wordpress-5-1-1-security-and-maintenance-release/
2019-03-16 17:55:04 +00:00
rillig
7bc8f05fc4 audio/freeswitch-sounds-*: add missing SHA-512 hashes
The distinfo for the English sounds also contained the hashes for the
French and Russian sounds. Since the latter packages have their own
distinfo files, they were redundant and have been removed.
2019-03-16 17:16:52 +00:00
bouyer
21139bddfd Re-add patch to workaround gcc warning, lost in the 4.11.1 update. 2019-03-16 16:39:17 +00:00
taca
edddbd7e05 lang/ruby/rails.mk: not yet, revert
Revert previous, not yet.
2019-03-16 14:48:00 +00:00
taca
a558dc9105 lang/ruby/rails.mk: make ruby-on-rails42 to 4.2.11.1
Start update of Ruby on Rails42 to 4.2.11.1.
2019-03-16 14:45:41 +00:00
taca
2b36e300e7 doc: Updated lang/ruby26{,-base} to 2.6.2 2019-03-16 14:40:56 +00:00
taca
bbe228288b lang/ruby26-base: update to 2.6.2
Update ruby26{,-base} to 2.6.2.

Quote from release announce.

Ruby 2.6.2 (2019-03-13)

This release includes bug fixes and a security update of the bundled
RubyGems.

See details in Multiple vulnerabilities in RubyGems and the commit logs.
2019-03-16 14:39:35 +00:00
taca
476c24852d doc: Updated lang/ruby25-{,-base} to 2.5.5 2019-03-16 14:35:48 +00:00
taca
3a73764b6e lang/ruby25-base: updateo to 2.5.5
Update ruby25{,-base} to 2.5.5.

Quote from release announce:

Ruby 2.5.4 (2019-03-13)

This release includes bug fixes and a security update of the bundled
RubyGems. See details in Multiple vulnerabilities in RubyGems and the commit
logs.

Ruby 2.5.5 (2019-03-15)

This release includes a bug fix for the deadlock in the
multi-thread+multi-process (using Process.fork) applications (ex: puma).
2019-03-16 14:34:56 +00:00
taca
fd4a070d14 sysutils/ruby-rb-inotify: ruby-rb-inotify moved to devel
Remove sysutils/ruby-rb-inotify which moved to devel/ruby-rb-inotify.
2019-03-16 14:21:35 +00:00
taca
2c08f50975 doc: Note update of these packages
sysutils/ruby-listen	3.1.5nb2
	www/ruby-sass-listen	4.0.0nb1
	www/ruby-compass	1.0.3nb1
2019-03-16 14:20:22 +00:00
taca
810363274b www/ruby-compass: update dependencies
* Update dependency to devel/ruby-rb-inotify.
* Enable dependency to devel/ruby-rb-fsevent.
2019-03-16 14:17:20 +00:00
taca
36b13a4bfa www/ruby-sass-listen: update dependency to ruby-rb-inotify
Update dependency to ruby-rb-inotify.
2019-03-16 14:14:48 +00:00
taca
aab59c1e44 sysutils/ruby-listen: update dependency to ruby-rb-inotify
Update dependency to ruby-rb-inotify.
2019-03-16 14:12:37 +00:00
wen
b34d700185 Updated devel/p5-CPAN to 2.25 2019-03-16 14:11:44 +00:00
wen
c96abe43b8 Update to 2.25
Upstream changes:
2019-03-03  k  <andk@cpan.org>

        * release 2.25

        * two weeks after the TRIAL release cpantesters have produced 298
        pass and 2 fail reports on 108 different configurations; the two
        fails are outliers I don't understand

        * no functional change over 2.25-TRIAL; only a couple in the
        distroprefs directory which is not used per default

2019-02-16  k  <andk@cpan.org>

        * release 2.25-TRIAL

        * fix: Avoid a warning when prompting install_help intro (Nicolas
        R/atoomic)

        * testfix: load the tested module early, before juggling with @INC

        * testfix: replace an exec with system and exit (greetings to Windows)

        * two more distroprefs lines

2019-02-14  k  <andk@cpan.org>

        * release 2.24-TRIAL

        * fix: set internal error state on writemakefile=NO in a rare case
        without any output

        * test fix: avoid a so far unreflected dependency on perldoc

        * a few more distroprefs

2019-02-10  k  <andk@cpan.org>

        * release 2.23-TRIAL

        * fix: when option cleanup_after_install is active, prevent
        rerunning make install after a cleanup; allow it only with the
        help of force; also prevent that it is triggered too early

        * fix: address #121162: support distroprefs for install.env

        * fix: the option h on cpan script now really ignores all other
        options and arguments

        * fix: Local::Null::Logger on cpan script did not honour
        CPANSCRIPT_LOGLEVEL

        * address #122520: exit 1 on unknown options on cpan script

        * address #94941: refuse to generate reports with CPAN::Reporter
        lower than 1.2011

        * fix: distropref method "goto" now inherits CALLED_FOR and other
        attributes from caller

        * fix: correct a buggy version comparison when testing version of
        Net::Ping

        * portability fix: ensure that Compress::Zlib supports gzopen()

        * internal fix: never overwrite internal attribute CALLED_FOR (no
        known user-relevant implications)

        * tiny test fixed uncovered by cpantesters, various tiny typo
        corrections

        * a couple of new and updated distroprefs files
2019-03-16 14:10:54 +00:00
taca
378253a3a9 sysutils/Makefile: remove ruby-rb-inotify 2019-03-16 14:10:35 +00:00
taca
157b9bbed5 doc: Moved sysutils/ruby-rb-inotify to devel/ruby-rb-inotify 2019-03-16 14:09:31 +00:00
rillig
990ca78aff databases/libdbi-driver-*: rename Makefile_drivers to silence pkglint
Makefile fragments are commonly written in *.mk or Makefile.* files.
Using an underscore instead of a dot confuses pkglint.
2019-03-16 14:06:21 +00:00
taca
bfe86c4637 devel/Makefile: add and enable ruby-rb-inotify 2019-03-16 14:03:53 +00:00
wen
254dc43cdd Updated devel/p5-CPAN-Perl-Releases to 3.90 2019-03-16 14:03:39 +00:00
taca
60a60cf448 devel/ruby-rb-inotify:
Move sysutils/ruby-rb-inotify to devel since this is a similar library
like ruby-rb-fsevent and ruby-rb-kqueue.
2019-03-16 14:03:13 +00:00
wen
eef26780c8 Update to 3.90
Upstream changes:
version 3.90 at 2019-02-21 10:39:01 +0000
-----------------------------------------

  Change: 7a586269927569bf30a6de7ab6b35138b5495883
  Author: Chris 'BinGOs' Williams <chris@bingosnet.co.uk>
  Date : 2019-02-21 10:39:01 +0000

    Updated for v5.29.8
2019-03-16 14:01:58 +00:00
wiz
2a27e72e94 doc: Updated shells/zsh to 5.7.1nb1 2019-03-16 14:01:57 +00:00
wiz
f379f669c4 zsh: remove --enable-zsh-mem from default arguments.
Bump PKGREVISION.
2019-03-16 14:01:45 +00:00
wen
dee67c6608 Updated time/p5-DateTime-Format-Builder to 0.82 2019-03-16 13:29:43 +00:00
ryoon
33879ae1bc Add comments for next update or revbump to use external malloc 2019-03-16 13:29:30 +00:00
wen
96272d73af Update to 0.82
Upstream changes:
0.82     2019-03-03

- Removed use of Class::Factory::Util. That distro is poorly maintained (by
  me) and it has some issues with its use of Module::Build. This distro
  (DateTime-Format-Builder) really doesn't need to use Class::Factory::Util.
2019-03-16 13:28:29 +00:00
wen
3f6715095f Updated textproc/p5-XML-LibXML to 2.0134 2019-03-16 13:23:21 +00:00
wen
abbeaec7f3 Update to 2.0134
Upstream changes:
2.0134  2019-02-10
    - Fix overzealous POD escaping in the docs' synposes
        - https://github.com/shlomif/perl-XML-LibXML/issues/26
        - Thanks to @davorg.

2.0133  2019-02-02
    - Mark as working with libxml2 2.9.9 ( and below ).
    - Allow LibParser to be provided for all methods
        - https://github.com/shlomif/perl-XML-LibXML/pull/23
        - Thanks to @lavock .
    - Portability fixes by Reini Urban and others.
        - https://github.com/shlomif/perl-XML-LibXML/pull/18 .
        - Thanks!
2019-03-16 13:22:28 +00:00
wen
25733ca966 Updated www/drupal8 to 8.6.12 2019-03-16 13:16:28 +00:00
wen
ae96e884fe Update to 8.6.12
Upstream changes:
8.6.12
The third-party Twig library, which powers Drupal 8's theme system, recently released new versions (Twig 1.38.0 and 1.38.1) that introduced a fatal error for Drupal 8 sites using Composer. Drupal 8.6.11 was released yesterday with an update to Twig 1.38.2 in order to resolve that error. However, this update also led to a different regression for certain Drupal 8 themes that use Twig {% embed %} tags. This release hotfixes Drupal 8 to resolve that regression. No other changes are included.

8.6.11
This release resolves two critical issues affecting Drupal 8 site updates:

    The third-party Twig library, which powers Drupal 8's theme system, recently released a new minor version (1.38.0) that introduced a fatal error when used with Drupal 8. As a result, Drupal 8 sites managed with Composer encountered this fatal error when updating Twig to version 1.38.0 or 1.38.1. This release updates Drupal to require Twig 1.38.2, which resolves the fatal error.

    The recent releases for SA-CORE-2019-003 introduced a serialized data integrity issue affecting some contributed and custom modules, including the Default Content and Paragraphs modules. This release resolves the issue for affected sites.

Additionally, this release resolves an administrator-only access bypass with the Layout Builder module. Previously, users who didn't have access to view individual entities were still granted access to configure the layout for that entity (if per-entity layout configuration was enabled) and therefore could view its content. This implicit access has been removed. Site owners should ensure that all content editor roles have access to view the content for which they are configuring the layout.
2019-03-16 13:15:03 +00:00
wen
78f6bc6124 Updated textproc/p5-Pod-Tests to 1.20 2019-03-16 11:15:01 +00:00
wen
06a59ec8a4 Update to 1.20
Upstream changes:
1.20      2019-03-02 20:48:22Z
        - distribution tooling updates
        - mark distribution as deprecated, in favour of Test-Inline
2019-03-16 11:14:08 +00:00
wiz
ab64ae9e44 notion: add upstream bug report URL. 2019-03-16 11:06:38 +00:00
leot
62015299fd doc: Updated sysutils/file to 5.36 2019-03-16 10:50:48 +00:00
leot
3f907af2fb file: Update to 5.36
pkgsrc changes:
 - Remove patches no longer needed (security backport of upstream changes)

Changes:
5.36
----
 * release 5.36
 * Fix cast to use cast macros
 * Add UCS-32 builtin detection (PR/61) reported by tmc
 * Fix stack read (PR/62) and write (PR/64) stack overflows
   reported by spinpx
2019-03-16 10:50:31 +00:00
maya
c786ffed4c doc: Added security/monocypher version 2.0.5 2019-03-16 09:17:36 +00:00
maya
56b8f30bd5 Add monocypher version 2.0.5
Monocypher is an easy to use crypto library. It is:

- Small. Sloccount counts about 1700 lines of code, small enough to
allow audits. The binaries are under 65KB.
= Easy to deploy. Just add monocypher.c and monocypher.h to your
project. They compile as C99 or C++, have no dependency, and
are dedicated to the public domain.
- Easy to use. The API is small, consistent, and cannot fail
on correct input.
- Fast. The primitives are fast to begin with, and performance
wasn't needlessly sacrificed. Monocypher holds up pretty well
against Libsodium, despite being closer in size to TweetNaCl.
2019-03-16 09:17:09 +00:00
bsiegert
e0c3a41af6 file: fix security issues, bump revision.
Fixes CVE-2019-8906, CVE-2019-8904 (not sure about CVE-2019-8905,
CVE-2019-8907).
Patch by Matthias Ferdinand via email to pkgsrc-users.
2019-03-16 09:02:41 +00:00
bsiegert
a48f8c3e63 xosd: place text correctly when using offset monitors.
From Aran Clauson in PR pkg/53994. Upstream seems dead.
2019-03-16 08:50:47 +00:00
bsiegert
41a0352835 doc: Updated lang/go112 to 1.12.1nb1 2019-03-16 08:36:49 +00:00