Commit graph

281634 commits

Author SHA1 Message Date
markd
8de1e69f92 tex-supertabular{,-doc}: correct version to 4.1e and add HOMEPAGE 2018-05-08 11:28:25 +00:00
markd
021d39bd83 tex-standalone{,-doc}: update to 1.3a
Bug fix update:
---------------

Fixed compatibility issues with LuaTeX which arised after non-backward-compatible updates to LuaTeX.

Config file:
 * Fixed log file warnings when used outside preamble by wrapping \PassOptionsToPackage call into preamble check.

Package:
 * Added check if \sa at requestedpage is undefined or empty, which can happen with newer versions of LuaLaTeX.
 * Updated page handling to new graphics driver version.


Also fixed the following reported bugs: (see https://bitbucket.org/martin_scharrer/standalone/issues)
 * Issue #22: Removed processing of AUX file with \globaldefs.
 * Issue #25: Changed how papersize special is added for dvips.
 * Issue #26: Adding '-units PixelsPerInch' to 'convert' call so that generated PNGs have correct units parameter.
 * Issue #30: Replaced jobname with subjobname in DVIPS precommand.
 * Issue #31: Added \makeatother before inputting .sta files so that the subpreamble-changed test works with files
using \makeatletter.
 * Issue #40: Corrected order of border option in manual.
2018-05-08 11:24:18 +00:00
markd
9c02d88f99 tex-skak{,-doc}: update to 1.5.3
changes unknown
2018-05-08 11:19:35 +00:00
markd
55d67d0c32 tex-siunitx{,-doc}: update to 2.7n
changes unknown
2018-05-08 11:15:14 +00:00
markd
bbf9ec2ac2 tex-revtex4{,-doc}: update to 4.0.45873
changes unknown
2018-05-08 11:11:25 +00:00
markd
6e3d3b18aa tex-repere{,-doc}: update to 17.11.2
Lagrange and Hermite interpolation
2018-05-08 11:07:21 +00:00
markd
239437d170 tex-ocgx2{,-doc}: update to 0.33
changes unknown
2018-05-08 11:02:37 +00:00
markd
adb55b6bb9 tex-oberdiek{,-doc}: update to 2018
Update to two packages in the collection:

  pdftexcmds :  add support for MD5 sum commands in XeTeX
                (using new primitives added to XeTeX last year)

  accsupp    :  support for Luatex added (separate from pdftex option,
                so the luatex85 compatibility package no longer required)

Updated Oberdiek bundle
use rb (binary) file reading for md5 checksum for issue #34 (pdftexcmds)

fix test for etec.src for issue #33  (iflang)

Skip patching with newer graphics (fixes #29) (grffile)

Merge pull request #25 from yudai-nkt/comment-with-doublecaretnotation
(hologo)

Comment out the BibTeX-like entry with ^^A (hologo)
2018-05-08 10:59:09 +00:00
markd
7f7a9969b1 tex-newtx{,-doc}: update to 1.531
changes unknown
2018-05-08 10:55:32 +00:00
maya
2fe9a7f02f doc: Updated www/firefox-l10n to 59.0.3 2018-05-08 10:39:57 +00:00
maya
b94326cb2b firefox-l10n: update to 59.0.3. 2018-05-08 10:39:43 +00:00
maya
5053df3805 doc: Updated www/firefox to 59.0.3 2018-05-08 10:39:23 +00:00
maya
9531e60f42 firefox: update to 59.0.3
Fix for compatibility with Windows 10 April 2018 update (Bug 1452619)
2018-05-08 10:38:57 +00:00
wen
63b61f0d61 Updated editors/joe to 4.6 2018-05-08 08:32:40 +00:00
wen
9d9f7ef2a6 Update to 4.6
Upstream changes:
JOE 4.6
Enhancements

Upgrade to Unicode 10.0.0. Add configure environment variable that allows you select Unicode 8.0.0, 9.0.0 or 10.0.0.

Install Gnome .desktop files for JOE. This allows you to use JOE in GUI "Open With" mouse actions.

Support strikeout and double-underline attributes for the few terminal emulators that support them. Use "stricken" and "dunderline" in the syntax files, or \s and \z in help screens and status line.

Bugs fixed

Fix bug where JOE would sometimes crash when editing shell scripts. This was due to an obscure bug in the syntax highlighter: 'reset' command (used for default state) was incorrectly messing with stack.

-highlighter_context was missing from many file types, which negated some improvements from the previous version.

Fixed signed char overflow with old style mouse events in large windows

Fix bug where path restart (//) was being applied to block filter command prompt. Strange things would happen if you had adjacent slashes in command arguments.

Allow ~ expansion but suppress path restart (//) in compiler error parsing.

Restore default handling of SIGPIPE and SIGINT for shell commands. This fixes an issue where SIGPIPE doesn't terminate a process as expected, for example by the head -n 10 in: ^K R !sh -c 'while :; do echo y; done' | head -n 10. This issue only occurred in read/write to !, JOE already did the right thing for shell windows and the filter region through shell command.

Improve screen update algorithm so that spaces at the ends of lines are always emitted. This allows them to be preserved when cutting text with the mouse from a terminal emulator window.

Improve efficiency of screen update algorithm: JOE had been resetting attributes such as background color before performing cursor motions (probably as work around for bugs in old terminal emulators). This made screen update slow when there were many attributes, as with syntax highlighting and color schemes. It was also repeatedly emitting ESC [ K.

Switch JOE to issue scrolling commands, even at high baud rates (before this, JOE issued scrolling commands only at 19200 and below because it used to be that simple screen refresh was faster than scrolling in terminal emulators. But this is no longer true with complex screens involving color schemes, unicode and highlighting).

Windows version

Fix file access checks. Inaccessible files due to ACL's weren't correctly detected. This was a regression in 4.5.

Check the correct (Windows) path in the home directory for color schemes. This was not re-implemented properly in 4.5.

JOE 4.5

Enhancements

New color scheme feature, which can be accessed with ^T S or by setting the -colors option.

24-bit color support can be enabled by setting the COLORTERM environment variable to truecolor or 24bit.

Several schemes included in-the-box:

gruvbox by Pavel Pertsev

ir_black by Todd Werth

molokai by Tomas Restrepo

solarized by Ethan Schoonover

wombat by Lars H. Nielsen

xoria by Dmitriy Y. Zotikov

zenburn by Jani Nurminen

The current line can be highlighted by pressing ^T U or by enabling the -hiline option.

The gutter containing line numbers has a dynamic size based on the length of the file, rather than a fixed size of 10.

Updated all language syntax files to use comment_todo and string/comment contexts where appropriate.

Now pass character which invoked a macro to each macro step and call. If a macro step happens to be the 'type' command, the character which invoked the macro will be typed in. For example, this macro will type three 'X's. Before this change you got three NULs.

type,type,type X

Bugs fixed

Fix exsave: (^K ^X) should close file when a block is present in the window, and the file is unmodified (regression from ^C change in 4.2).

Fix regex assertions: they were not working because the character before the search position was not being loaded.

For jmacs: ^Q^J now again inserts \n in the string replace prompt. This broke beginning with JOE 4.0.

Don't try to open files for writing to check file access. This behaves better on unionfs mounts.

Fix stray blocks created after find/replace.

Windows version

Fix inability to set indent step to 1 from menu.

Add support for math functions, fix engineering display.

Fix backslash escapes in find/replace.

Support italicized text.

JOE 4.4
Enhancements

Bugs fixed

Fix segfault due to buffer overrun. This happens if a line with many backslashes appears in the status line context display.

Fix jmacs: ^X ^F and ^X ^B were not working

Build fixes for Solaris

Improve php highlighter: allow numbers in substitution variable names

Unicode tweak: treat private use characters (Co) as printable

Dockerfile highlighter: Add Docker new commands from 1.12, mark bad strings in arrays

Fix loading external charmaps

Windows version

Fix crashing bug when using incremental search
JOE for Windows 4.3
Download

Bugs fixed

Fixed a missed merge that prevented some options menu items from being changed (tab width, tab char, etc).

Fixed bugs updating the title bar.

Minor memory leak/performance fix in subprocess communication.

(from newer version) Fix segfault due to buffer overrun. This happens if you a line with many backslashes appears in the status line context display.

JOE 4.3
Enhancements

Improve memory usage by shrinking buffer header size and highlighter state size.

Improve performance of status line context display (which shows the first line of the function that the cursor is currently in). This feature was making JOE very slow on extremely large files with auto indent enabled (typically JSON or XML data files). Now the syntax highlighter computes the context display (using a new syntax named context.jsf).

Add a mode 'title' to enable or disable the status line context display (previously autoindent mode was overloaded to do this).

Disable syntax highlighting and context display in very large files

Force more appropriate modes when we enter hex dump display: enable overtype, disable autoindent, wordwrap, ansi, picture.

Handle middle mouse button in "joe -mouse" mode (before it did nothing). It's treated as paste (copy region to mouse) as expected. (patch from Petr Olsak).

Bugs fixed

Do not kill region highlighting during incremental search (patch from Petr Olsak).

Negative numbers were not being recognized in blocks

PgUp/PgDn would try to scroll menu if the window above is a menu (it should do this only for completion menus associated with prompts)

Use 'LC_ALL=C sed' to get JOE to compile in OS X.

Forward direction delimiter matching where the delimiters do not begin with special characters (for example in Verilog "begin" / "end") was not working.

Get mouse to work in menus: this broke in 4.1

Character classes with ranges were not working for UTF-8 (as in \[a-z])

Apply spec highlighting to .spec files

Gracefully handle short terminals: fix segfaults which occur when trying to shrink terminal while many windows are on the screen or while turning on help with a short terminal. Fix similar bugs involving the skiptop option. JOE now works even if the terminal height is only one line.

JOE 4.2
New or improved syntax files for the following languages:

Dockerfile
Usability Enhancements

The top Google help searches for JOE include:

How do I save and exit? The startup copyright notice has been replaced with basic help for beginners: ^K Q to exit and ^K H for help.

How do I dismiss the region highlighting? The traditional way is to hit ^K B ^K K, but this is slightly non-obvious and has always been awkward. Now Ctrl-C will do it.

How do I close all files and exit? Now Ctrl-K Q does this. Previously ^K Q was the same as ^C: abort a single file.

Restyle the help screens:

Make it more obvious that there is more than one screen: put the help for help inline with the text instead of in the (seemingly invisible) header.

Mention Ctrl-Arrow region selection, status and goto matching delimiter commands on the first screen.

Remove time and "Ctrl-K H for help" message from status bar. Beginners often don't notice this help message, and it takes up valuable status bar space that power users want for the context display.

Add ^KH for help to search and replace prompts. Many JOE users do not know about this context sensitive help.

Provide aborthint and helphint options so that the ^C and ^K H hints can be customized depending on the rc file (so say ^G for abort in jmacs, for example).

Enable -noxon by default (disable ^S/^Q flow control). This allows us to bind ^Q to quote and ^S / ^R to incremental search.

Document ESC X (command prompt) in the help screens.

"joe --help" now prints all command line options.

Other Enhancements

Tags search now tries to find the tags file in parent directories if it does not exist in the current directory and if the TAGS environment variable was not set.

Built-in calculator can now print and accept numbers in binary, octal and engineering formats: dec 12_345 eng 12.345_0e3 bin 0b11_0000_0011_1001 oct 0o3_0071 hex 0x3039

Built-in calculator now prints and accepts separating underscores for clarity. For example, 4_294_967_296 instead of 4294967296.

Enhanced calculator statistics functions:

dev computes standard deviation with full population
samp computes standard deviation with sample of population
Linear regression analysis. Select a region of x and y values, then:
lr(x) provide estimate of y given x
rlr(y) provide estimate of x given y
Lr, lR, LR: log, exponential, power regression
Calculator region functions now assume the entire buffer if no region is set.

Tab completion now works at the calculator prompt (and in all prompts which allow numeric input, such as ^KL- go to line).

Make new regex engine (from JOE 4.1) more compatible with the classic engine. \y is now shorthand for \(\.\*\), so that it does what \* did in the old engine. Also:

\. no longer matches newline.
\* matches shortest match, not longest match.
Add -left and -right options to control the amount scrolling when the cursor moves past the left or right edge of the screen. When the baud rate is low these are automatically set to a large amount. Also, these now control the manual horizontal scrolling commands. When these are positive, they indicate number of columns. When they are negative, they indicate a fraction of the screen width (-2 is 1/2 the width).

Bugs fixed

Fix use after free bug which shows up as a crash in OpenBSD

Fix bug where indent step value was not shown on ^T menu

Fix bug where setting margin doesn't work on big-endian systems

Fix issue where highest valued Unicode character equivalent was not translating to its corresponding 8-bit character. Effect of this was that Delete key was not working in shell windows in ASCII character set.

Standard deviation calculator function was not producing correct results.

Allow koi8r and koi8-r for KOI8-R in joe_getcodeset (which is only used if there is no setlocale).

Guess_crlf forced UNIX line endings for new files even though crlf was set. Now crlf is left alone if guess_crlf can not determine the line ending.

If cursor was at end of a long line and you switched to hex dump display mode, then hex dump was scrolled. Now scroll offset is reset when you switch to hex display mode.
2018-05-08 08:31:29 +00:00
wen
1e713dc43b Updated www/apachetop to 0.18.4 2018-05-08 08:18:50 +00:00
wen
524d242749 Update to 0.18.4
Add LICENSE
Update HOMEPAGE

Upstream changes:
v0.18.4 (12th April, 2018)
 * fix for clang6
 * add better build instructions to INSTALL
 * add option (-v) to show version
 * fix minor mem leak (8 bytes per apachetop invocation)

v0.17.4 (25th April, 2017)
 * create config.nice when running ./configure
 * fix error: extra qualification on member (when using adns)
 * fix compiler warnings
 * fix a potential buffer overflow


v0.15.6 (10th June, 2015)
 * allow other time/date formats in Apache log
 * use sys/param.h for MAXPATHLEN
 * fix deprecated auto tools macros
 * fix compiler warnings
 * use silent compile rules
 * updated man page
 * change version to 0.YY.M of new release


v0.12.6 (27th October, 2005)
 * fixed security issue which described at CVE-2005-2660
2018-05-08 08:17:36 +00:00
maya
5b7fd6b928 Amend changes so ripgrep appears in textproc. 2018-05-08 07:49:53 +00:00
maya
68bf080e27 Add ripgrep in textproc directory.
suggested by alnsn. thanks.
2018-05-08 07:48:39 +00:00
maya
a0eec00cad Remove ripgrep. to be moved to textproc, like grep. 2018-05-08 07:47:44 +00:00
wiz
757684a277 p5-File-HomeDir: fix thinko in previous 2018-05-08 06:53:52 +00:00
wiz
dafc2a4eb0 p5-File-HomeDir: fix PKGNAME after update
Noted by minskim
2018-05-08 06:52:57 +00:00
adam
ab5a7deb3e Updated devel/libuv, databases/py-multidict, devel/py-async-timeout, www/py-aiohttp 2018-05-08 04:54:50 +00:00
adam
7b44f43cbc py-aiohttp: updated to 3.2.0
3.2.0

Features
Raise TooManyRedirects exception when client gets redirected too many times instead of returning last response.
Extract route definitions into separate web_routedef.py file
Raise an exception on request body reading after sending response.
ClientResponse and RequestInfo now have real_url property, which is request url without fragment part being stripped
Speed up connector limiting
Added and links property for ClientResponse object
Add request.config_dict for exposing nested applications data.
Speed up HTTP headers serialization, server micro-benchmark runs 5% faster now.
Apply assertions in debug mode only

Bugfixes
expose property app for TestClient
Call on_chunk_sent when write_eof takes as a param the last chunk
A closing bracket was added to __repr__ of resources
Fix compression of FileResponse
Fixes some bugs in the limit connection feature

Improved Documentation
Drop async_timeout usage from documentation for client API in favor of timeout parameter.
Improve Gunicorn logging documentation
Replace multipart writer .serialize() method with .write() in documentation.

Deprecations and Removals
Deprecate Application.make_handler()
2018-05-08 04:54:10 +00:00
adam
30d32602a5 py-async-timeout: updated to 3.0.0
3.0.0:
Drop Python 3.4, the minimal supported version is Python 3.5.3
Provide type annotations
2018-05-08 04:48:49 +00:00
adam
4147949670 py-multidict: updated to 4.3.1
4.3.1:
Fix a typo in multidict stub file.

4.3.0:
Polish type hints, make multidict type definitions generic.
2018-05-08 04:20:31 +00:00
adam
209c5948e4 libuv: updated to 1.20.3
v1.20.3:
* win: add Windows XP support to uv_if_indextoname()
* win: fix `'floor' undefined` compiler warning
* win, pipe: stop read for overlapped pipe
* build: fix utf-8 name of copyright holder
* zos: initialize pollfd revents
* zos,doc: add system V message queue note
* linux: don't use uv__nonblock_ioctl() on sparc
2018-05-08 04:14:30 +00:00
wen
776bc1e9f9 Updated time/p5-DateTime-Locale to 1.20 2018-05-08 00:19:18 +00:00
wen
fa2b531092 Update to 1.20
Upstream changes:
1.20     2018-05-06

- Fix test failures on Windows. Reported by Adrian Devries. GH #23.
2018-05-08 00:18:30 +00:00
wen
f6d169152e Updated textproc/p5-podlators to 4.11 2018-05-08 00:13:37 +00:00
wen
bd7c350ae3 Update to 4.11
Upstream changes:
podlators 4.11 (2018-05-07)

    [Pod::Text] The default value of the sentence option is false, not
    true, and has been since at least 2.0.0.  Fix the documentation to
    match.  Thanks, eponymous alias.  (#124461)

    [Pod::Text::Termcap] Correctly honor the width option, which was being
    ignored due to a bug in interpreting user-supplied options.  Thanks,
    eponymous alias.  (#124447)

    [Pod::Text::Color, Pod::Text::Termcap] Fix a subtle wrapping bug with
    long =item text that would cause lines to be wrapped when they didn't
    need to be.  Thanks, eponymous alias.

    [Pod::Text::Color, Pod::Text::Termcap] Clear any text attributes at
    the end of each line and reinstate them at the start of the next line,
    since some pagers (less -R in particular) clear all text attributes at
    the end of each line and were therefore not correctly showing
    attributes in wrapped text.  Thanks, eponymous alias.

    [Pod::Text::Termcap] Correctly get the terminal width from Term::Cap
    information when COLUMNS isn't set, instead of getting a string value
    that later cannot be used numerically.

    Specifying "none" for the errors option of Pod::Man and Pod::Text no
    longer results in an errata section in the generated documentation,
    matching the documented behavior.  Thanks, Olly Betts.

    Fix order of SEE ALSO section in manual pages to match the
    recommendation of perlpodstyle.

    Use https for all eyrie.org URLs.

    Add SPDX-License-Identifier headers to all substantial source files.
2018-05-08 00:09:47 +00:00
minskim
64cfaf4333 devel/hyperscan: Add patches 2018-05-07 22:19:34 +00:00
minskim
3c6f234098 doc: Added devel/hyperscan version 4.7.0 2018-05-07 22:19:04 +00:00
minskim
b3210798ef devel/Makefile: Add hyperscan 2018-05-07 22:18:56 +00:00
minskim
49efc417e2 devel/hyperscan: Import version 4.7.0
Hyperscan is a high-performance multiple regex matching library. It
follows the regular expression syntax of the commonly-used libpcre
library, but is a standalone library with its own C API. Hyperscan
uses hybrid automata techniques to allow simultaneous matching of
large numbers (up to tens of thousands) of regular expressions and for
the matching of regular expressions across streams of data.
2018-05-07 22:18:53 +00:00
minskim
95181d6711 devel/boost-libs: fiber doesn't build on Darwin-1[0-5].*
fiber requires thread_local, and clang in Xcode 7 or earlier doesn't
allow it.
2018-05-07 18:47:02 +00:00
bacon
6ccf2d54f7 doc: Added biology/samtools version 1.8 2018-05-07 18:41:12 +00:00
bacon
6136f9678e Add samtools 2018-05-07 18:40:10 +00:00
bacon
c5c6ca3a78 biology/samtools: import samtools-1.8
Samtools implements various utilities for post-processing alignments in the
SAM, BAM, and CRAM formats, including indexing, variant calling (in conjunction
with bcftools), and a simple alignment viewer.

OK wiz@
2018-05-07 18:37:31 +00:00
khorben
8c2097ff30 Correctly set the path to the Python interpreter
This notably fixes building with PKG_DEVELOPER=yes.

Bump PKGREVISION as some of the files installed are modified.
2018-05-07 15:27:09 +00:00
wiz
3f391cb5ae doc/TODO: gnumeric112-1.12.40 done, remove 2018-05-07 12:15:24 +00:00
wiz
c12d0f69c2 doc: Updated math/gnumeric112 to 1.12.40 2018-05-07 11:55:08 +00:00
wiz
90add85b35 gnumeric: update to 1.12.40.
Gnumeric 1.12.40

Andreas:
	* Fix histogram tool for the case of no labels. [#795475]

Dean McCarron:
	* Introspection fixes.

Morten:
	* Add floating-point environment sanity check.  [#794515]
	* Before saving, verify that files hasn't changed on disk.  [#334024]
	* Add GUI for comparing sheets.
	* Introspection fixes.
	* Clean up workbook view construction.
	* Test suite improvements.
	* Fix problems with boxed types.
	* Avoid most punting for object properties.
	* Fix paste from LibreOffice.
	* Fix paste to LibreOffice -- use Biff8.  [#795280]
	* Allow inter-process paste-special.  [#346630]
	* Fix ssconvert --merge-to problem with names.  [#795408]
	* Fix problem with image pasting.
	* Allow pasting an image into Gnumeric.  [#366816]
	* Full-column paste includes column width.  [#121722]
	* Auto-fix shared array formulas in gnumeric files.
	* No-net-access doc build.  [#790226]
	* No-net test suite fixes.
2018-05-07 11:55:00 +00:00
wiz
576f5286a3 doc: Updated misc/goffice0.10 to 0.10.40 2018-05-07 11:33:44 +00:00
wiz
9af3e9ec4a goffice0.10: update to 0.10.40.
goffice 0.10.40:

Hiroshi Hatake:
	* Introspection fixes. [#793684]

Morten:
	* Fixes required for running with musl.  [#794115]
	* Store last-known modtime for GODoc.
	* Option menus: handle markup for labels.
	* Introspection fixes
	* Improve font selector sizing a bit.
2018-05-07 11:33:35 +00:00
wiz
c32c0aa77c doc: Updated sysutils/dbus to 1.12.8 2018-05-07 11:28:45 +00:00
wiz
c1fe1b8e0a dbus: update to 1.12.8.
dbus 1.12.8 (2018-04-30)
========================

The “golden super-velociraptor” release.

Enhancements:

• The Devhelp documentation index is now in version 2 format
  (fd.o #106186, Simon McVittie)

• Give the dbus-daemon man page some scarier warnings about
  <allow_anonymous/> and non-local TCP, which are insecure and should
  not be used, particularly for the standard system and session buses
  (fd.o #106004, Simon McVittie)

Fixes:

• Fix installation of Ducktype documentation with newer yelp-build
  versions (fd.o #106171, Simon McVittie)
2018-05-07 11:28:37 +00:00
wiz
148fb4e73d doc: Updated sysutils/py-dbus to 1.2.8 2018-05-07 11:26:58 +00:00
wiz
214fa72a1e doc: Updated sysutils/dbus-python-common to 1.2.8 2018-05-07 11:26:46 +00:00
wiz
34fa6172c6 py-dbus, dbus-python-common: Update to 1.2.8
D-Bus Python Bindings 1.2.8 (2018-05-04)
========================================

The “cursed ice surface” release.

Dependencies:

• Documentation requires Sphinx and the readthedocs theme
• Documentation no longer requires epydoc

Enhancements:

• Build documentation with Sphinx instead of epydoc

• Remove obsolete COMPAT.txt, documenting compatibility breaks in
  versions over a decade old

Fixes:

• Make sure $(builddir)/test exists before creating .test files there

• Add PKG-INFO and egg_info to dist tarballs so they can be uploaded
  to PyPI again
2018-05-07 11:26:30 +00:00