Commit graph

3457 commits

Author SHA1 Message Date
brook
8d3c599c6d Added R-markdown v0.7.4. 2014-09-03 18:33:58 +00:00
brook
e5527521be Initial revision of R-markdown v0.7.4.
Markdown is a plain-text formatting syntax that can be converted to
XHTML or other formats. This package provides R bindings to the
Sundown markdown rendering library.
2014-09-03 18:33:02 +00:00
brook
5f3ffde920 Added R-mime v0.1.2. 2014-09-03 18:29:56 +00:00
brook
37b194d1ba Initial revision of R-mime v0.1.2.
This package guesses the MIME type from a filename extension using the
data derived from /etc/mime.types in UNIX-type systems.
2014-09-03 18:28:43 +00:00
brook
39b6177fa7 Added R-highr v0.3. 2014-09-03 18:23:38 +00:00
brook
0a266dbd01 Initial revision of R-highr v0.3.
This package provides syntax highlighting for R source code. Currently
it supports LaTeX and HTML output. Source code of other languages can
be supported via Andre Simon's Highlight package.
2014-09-03 18:21:45 +00:00
brook
531bf4de8e Added R-formatR v1.0. 2014-09-03 18:04:14 +00:00
brook
8be05c9fc5 Initial revision of formatR v1.0.
This package provides a function tidy_source() to format R source
code. Spaces and indent will be added to the code automatically, and
comments will be preserved under certain conditions, so that R code
will be more human-readable and tidy. There is also a Shiny app as a
user interface in this package (see tidy_app()).
2014-09-03 18:02:44 +00:00
brook
60211da695 Added R-evaluate v0.5.5. 2014-09-03 17:00:42 +00:00
brook
58aeec8352 Initial revision of evaluate v0.5.5.
Parsing and evaluation tools that make it easy to recreate the command
line behaviour of R.
2014-09-03 16:59:19 +00:00
brook
dedd9ed14e Added R-stringr v0.6.2. 2014-09-03 16:08:22 +00:00
brook
f11a27e5db Initial import of stringr v0.6.2.
stringr is a set of simple wrappers that make R's string functions
more consistent, simpler and easier to use.  It does this by ensuring
that: function and argument names (and positions) are consistent, all
functions deal with NA's and zero length character appropriately, and
the output data structures from each function matches the input data
structures of other functions.
2014-09-03 16:06:48 +00:00
szptvlfn
4e8f532d1c + hs-semigroups 2014-09-02 20:59:55 +00:00
szptvlfn
72a94fcf73 Import semigroups-0.15.2 as math/hs-semigroups,
packaged for wip by pho.

In mathematics, a semigroup is an algebraic structure consisting of a set
together with an associative binary operation. A semigroup generalizes a
monoid in that there might not exist an identity element. It also
(originally) generalized a group (a monoid with all inverses) to a type
where every element did not have to have an inverse, thus the name
semigroup.
2014-09-02 20:58:16 +00:00
adam
480a8011c4 Changes 4.55:
Some internal (non-API) routines to estimate the condition of
the basis matrix were added. These routines are mainly intended
to be used by the simplex-based solvers.

Two open modes "a" and "ab" were added to GLPK I/O routines.

Minor bug was fixed in the solver glpsol (command-line options
--btf, --cbg, and --cgr didn't work properly).

A serious bug was fixed in a basis factorization routine used
on the dense phase. (The bug might appear only if the number of
rows exceeded sqrt(2**31) ~= 46,340 and caused access violation
exception because of integer overflow.)

Two API routines glp_alloc and glp_realloc were documented.

Translation of the document "Modeling Language GNU MathProg"
to Spanish was included (in LaTeX and pdf formats).
2014-08-30 11:19:52 +00:00
obache
67b87a9e82 Update ruby-spreadsheet to 1.0.0.
### 1.0.0 / 29.08.2014

* added spreadsheet/errors.rb to Manifest.txt
2014-08-30 01:31:02 +00:00
szptvlfn
9da944d0cd make it clear what package depend on
discussed with wiz@.
2014-08-29 14:08:38 +00:00
obache
532b8253e1 Update ruby-spreadsheet to 0.9.9.
### 0.9.9 / 28.08.2014

Author: PikachuEXE <pikachuexe@gmail.com>
Date:   Wed Aug 27 09:55:41 2014 +0800

* Add custom error classes
* Raise custom error for unknown code page or unsupported encoding
2014-08-29 10:10:41 +00:00
brook
09e59399ca Update to date v1.2-34.
2014-03-17  Kurt Hornik  <Kurt.Hornik@wu.ac.at>

	* DESCRIPTION (Version): New version is 1.2-34.

	* NAMESPACE: Improve.

2012-11-23  Kurt Hornik  <Kurt.Hornik@wu.ac.at>

	* DESCRIPTION (Version): New version is 1.2-33.

	* src/char_date.c (char_date): Try avoiding buffer overflow as
	suggested by Erik Doffagne <erik.doffagne@gmail.com>.
2014-08-28 03:14:39 +00:00
brook
89407def91 Update to plyr v1.8.1. 2014-08-26 16:40:40 +00:00
brook
5ee66a920c Add a buildlink3.mk file for depending packages. 2014-08-26 16:36:06 +00:00
brook
918710ef22 Add R-Rcpp v0.11.2. 2014-08-26 16:30:01 +00:00
brook
3933b26ba6 Initial revision. 2014-08-26 16:28:47 +00:00
brook
d95a62a01d Update to DAAG v1.20. 2014-08-26 15:48:39 +00:00
brook
15e32d7b3b Add R-latticeExtra v0.6-26. 2014-08-26 15:46:20 +00:00
brook
a18e645227 Initial revision. 2014-08-26 15:44:48 +00:00
brook
6a98e3f6a3 Update to chron v2.3-45. 2014-08-26 14:08:02 +00:00
brook
597e2cd862 Add R-countrycode. 2014-08-26 04:33:59 +00:00
brook
ba51cc31f9 Initial revision. 2014-08-26 04:32:27 +00:00
obache
44f242b224 Update ruby-spreadsheet to 0.9.8.
### 0.9.8 / 19.08.2014

Author: PikachuEXE <pikachuexe@gmail.com>
Date:   Tue Aug 19 09:54:30 2014 +0800

* Fix Encoding for MRI 2.1.0
2014-08-24 01:02:37 +00:00
wiz
ae075e6d55 Bump PKGREVISION for ilmbase shlib major bump. 2014-08-22 11:24:25 +00:00
joerg
66582b0394 Don't strip library path for Fortran lib. 2014-08-19 13:37:53 +00:00
joerg
db452e7a63 Build and link Fortran code using the Fortran Compiler. Bump revision. 2014-08-19 13:37:14 +00:00
szptvlfn
8d39c22415 Update to 0.3.3.0
changelog:
0.3.3.0
    * Add the isFloating or isInteger predicates.
      Courtesy of Zejun Wu (@watashi).
    * Add the toRealFloat' and toBoundedInteger functions.
      Courtesy of Fujimura Daisuke (@fujimura).

0.3.2.2
    * Enable package to link with integer-simple instead of
      integer-gmp using the -finteger-simple cabal flag.
      Courtesy of @k0ral.

0.3.2.1

    * Parameterize inclusion of the Data.ByteString.Builder.Scientific
      module using the bytestring-builder flag. Disabling this flag
      allows building on GHC-7.0.4 which has bytestring-0.9 installed
      by default.

0.3.2.0

    * Add the floatingOrInteger function
    * Fix build on GHC-7.0.4
    * More efficient and better behaving magnitude computation
    * Lower the number of cached magnitudes to 324 (same as GHC.Float)

0.3.1.0

    * Don't normalize on construction but do it when pretty-printing
      instead. Also provide a manual normalize function.
    * Improve efficiency of toRealFloat
    * Added note about caching magnitudes
    * Dropped dependency on arithmoi
    * Make benchmark easier to build
    * Add junit XML output support (for Jenkins)

0.3.0.2

    * Lower the minimal QuickCheck version.
    * Make sure sized exponents are generated in the QuickCheck tests.

0.3.0.1

    * Fix build for bytestring-0.10.0.*

0.3.0.0

    * Fix a DoS vulnerability that allowed an attacker to crash the
      process by sending a scientific with a huge exponent like
      1e1000000000.
    * Fix various RealFrac methods.
    * Cache some powers of 10 to speed up the magnitude computation.
    * Normalize scientific numbers on construction.
    * Move the Text Builder to its own module &
      provide a ByteString builder
    * Added more documentation
2014-08-16 21:54:50 +00:00
szptvlfn
c3ec4771b2 + hs-mwc-random 2014-08-14 21:59:03 +00:00
szptvlfn
fd2ce923be Import mwc-random-0.13.2.0 as math/hs-mwc-random,
packaged for wip.

This package contains code for generating high quality random numbers that
follow either a uniform or normal distribution. The generated numbers are
suitable for use in statistical applications.

The uniform PRNG uses Marsaglia's MWC256 (also known as MWC8222)
multiply-with-carry generator, which has a period of 2^8222 and fares well
in tests of randomness. It is also extremely fast, between 2 and 3 times
faster than the Mersenne Twister.

Compared to the mersenne-random package, this package has a more convenient
API, is faster, and supports more statistical distributions.
2014-08-14 21:57:25 +00:00
wiz
4435519808 + p5-Statistics-TTest 2014-08-13 20:35:35 +00:00
wiz
0647850271 Import p5-Statistics-TTest-1.1.0 as math/p5-Statistics-TTest.
Perl module for computing confidence intervals in parameter estimation
with Student's T distribution.
2014-08-13 20:35:24 +00:00
wiz
e6d8f783a6 + p5-Statistics-Distributions 2014-08-13 20:31:41 +00:00
wiz
e81af35dea Import p5-Statistics-Distributions-1.02 as math/p5-Statistics-Distributions.
Perl module for calculating critical values and upper probabilities
of common statistical distributions.
2014-08-13 20:31:23 +00:00
adam
72ed0307eb Revbump after boost-libs update 2014-08-13 10:57:32 +00:00
obache
d253456d83 Update py-roman to 2.0.0.
2.0.0 (2013-02-25)
------------------

- Added Python 3.3 and PyPy support.

- Added tests.
2014-08-08 12:48:44 +00:00
szptvlfn
5cac8019aa + hs-distributive 2014-08-02 21:43:47 +00:00
szptvlfn
ed42e7e8cf Import distributive-0.4.4 as math/hs-distributive,
packaged for wip by pho.

Haskell 98 Distributive functors -- Dual to Traversable
2014-08-02 21:42:23 +00:00
wen
e3d98f2b01 Update to 1.9
Add missing DEPENDS

Upstream changes:
NetworkX 1.9
Release date: 21 June 2014

Support for Python 3.1 is dropped in this release.

Highlights
Completely rewritten maximum flow and flow-based connectivity algorithms with backwards incompatible interfaces
Community graph generators
Stoer-Wagner minimum cut algorithm
Linear-time Eulerian circuit algorithm
Linear algebra package changed to use SciPy sparse matrices
Algebraic connectivity, Fiedler vector, spectral ordering algorithms
Link prediction algorithms
Goldberg-Radzik shortest path algorithm
Semiconnected graph and tree recognition algorithms
2014-07-28 12:16:23 +00:00
markd
52e01e1e91 Update R to 3.1.1
NEW FEATURES:

    * When attach() reports conflicts, it does so compatibly with
      library() by using message().

    * R CMD Sweave no longer cleans any files by default, compatibly
      with versions of R prior to 3.1.0.  There are new options
      --clean, --clean=default and --clean=keepOuts.

    * tools::buildVignette() and tools::buildVignettes() with clean =
      FALSE no longer remove any created files.  buildvignette() gains
      a keep argument for more cleaning customization.

    * The Bioconductor 'version' used by setRepositories() can now be
      set by environment variable R_BIOC_VERSION at runtime, not just
      when R is installed.  (It has been stated that Bioconductor will
      switch from 'version' 2.14 to 'version' 3.0 during the lifetime
      of the R 3.1 series.)

    * Error messages from bugs in embedded Sexpr code in Sweave
      documents now report the source location.

    * type.convert(), read.table() and similar read.*() functions get a
      new numerals argument, specifying how numeric input is converted
      when its conversion to double precision loses accuracy.  The
      default value, "allow.loss" allows accuracy loss, as in R
      versions before 3.1.0.

    * For some compilers, integer addition could overflow without a
      warning.  R's internal code for both integer addition and
      subtraction is more robust now.

    * The function determining the default number of knots for
      smooth.spline() is now exported, as .nknots.smspl().

    * dbeta(, a,b), pbeta(), qbeta() and rbeta() are now defined also
      for a = 0, b = 0, or infinite a and b (where they typically
      returned NaN before).

    * Many package authors report that the RStudio graphics device does
      not work correctly with their package's use of dev.new().  The
      new option dev.new(noRStudioGD = TRUE) replaces the RStudio
      override by the default device as selected by R itself, still
      respecting environment variables R_INTERACTIVE_DEVICE and
      R_DEFAULT_DEVICE.

    * readRDS() now returns visibly.

    * Modifying internal logical scalar constants now results in an
      error instead of a warning.

    * install.packages(repos = NULL) now accepts http:// or ftp:// URLs
      of package archives as well as file paths, and will download as
      required.  In most cases repos = NULL can be deduced from the
      extension of the URL.

    * The warning when using partial matching with the $ operator on
      data frames is now only given when
      options("warnPartialMatchDollar") is TRUE.

    * Package help requests like package?foo now try the package foo
      whether loaded or not.

    * General help requests now default to trying all loaded packages,
      not just those on the search path.

    * Added a new function promptImport(), to generate a help page for
      a function that was imported from another package (and presumably
      re-exported, or help would not be needed).
2014-07-24 21:33:03 +00:00
wiz
7f5d7e3174 Remove unnecessary comment. 2014-07-22 10:12:56 +00:00
wiz
0f67ca5c7b Update to 0.19. Update HOMEPAGE and MASTER_SITES. Allow python-3.
--0.19--
Released June 10, 2014

* Moved issue tracking to github and the main website to mpmath.org.
  Several URLs and issue numbers were updated in the documentation
  (Sergey B Kirpichev)
* Enabled automatic testing with Travis CI (Sergey B Kirpichev)
* Fixed many doctest issues (Sergey B Kirpichev)
* Converted line endings to LF (Ondrej Certik)
* Made polyroots() more robust (Ondrej Certik)
2014-07-22 10:11:42 +00:00
wiz
f329ab7c34 Import py34-almost-0.1.5 as math/py-almost.
A Python helper module to compare two numbers generously.
2014-07-22 10:09:14 +00:00
wiz
59a8f24e85 + py-almost 2014-07-22 10:08:50 +00:00