Commit graph

6 commits

Author SHA1 Message Date
bacon
46bcc317f6 biology/peak-classifier: Update to 0.1.2
Mainly updates for evolving libxtend and biolibc APIs
A few minor fixes and enhancements
2021-12-14 19:08:11 +00:00
nia
4dd52433ec biology: Replace RMD160 checksums with BLAKE2s checksums
All checksums have been double-checked against existing RMD160 and
SHA512 hashes
2021-10-26 10:03:36 +00:00
nia
169fb9f0f3 biology: Remove SHA1 hashes for distfiles 2021-10-07 13:19:36 +00:00
bacon
40b825e7c1 biology/peak-classifier: Update to 0.1.1.21
Fix regression: Replace BL_BED_SET_STRAND() macro with
bl_bed_set_strand(), which performs sanity checks
2021-09-03 01:57:56 +00:00
bacon
d5c97c175e biology/peak-classifier: Update to 0.1.1.20
Updates for libxtend and biolibc API changes
2021-08-28 18:40:29 +00:00
bacon
c5b9a46b0d biology/peak-classifier: import peak-classifier-0.1.1
Classify ChIP/ATAC-Seq peaks based on features provided in a GFF
Peaks are provided in a BED file sorted by chromosome and position. The GFF
must be sorted by chromosome and position, with gene-level features separated
by ### tags and each gene organized into subfeatures such as transcripts and
exons.  This is the default for common data sources.
2021-06-15 13:54:14 +00:00