Commit graph

2108 commits

Author SHA1 Message Date
adam
b4580806e2 Changes 4.30:
* glpspx.h, glpspx03.c, glpapi06.c
  The primal simplex solver (spx_prim_opt, spx_prim_feas) was
  replaced by a new implementation (spx_primal), which currently
  provides the same features as the old version.

* glpmpl01.c, glpmpl03.c
  Some changes were made in the MathProg translator to allow <,
  <=, >=, and > on comparing symbolic values.

* glplpx10.c
  Internal routine set_d_eps in the exact LP solver was changed
  to prevent approximation errors in case of integral data.
2008-08-20 08:19:13 +00:00
dholland
d7e204d8ba Use the PIC flag for Fortran that autoconf picks out. Fixes broken
build on amd64 and probably others.
2008-08-18 01:47:31 +00:00
dholland
5c4c0363db Use the PIC flag for Fortran that autoconf picks out. Fixes broken
build on amd64 and probably others.
2008-08-18 00:28:21 +00:00
he
8cbd9f959b Update from version 0.61nb1 to 0.63.
Pkgsrc changes:
 o Changed MAINTAINER to pkgsrc-users@ as per communication with maintainer

Upstream changes:
0.63   2008-07-21
- minor tweak in union(); added tests

0.62   2008-07-20
- fixed a problem in union() that caused first() to return a wrong result.
  reported by David Gang
2008-08-17 17:06:25 +00:00
he
129d44a2a1 Update from version 1.00nb1 to 1.02.
Pkgsrc changes:
 o Change MAINTAINER to pkgsrc-users@ as per communication with maintainer

Upstream changes:

1.02    2008-07-30

    * The 1.01 distribution tarball was broken; this is what it should
      have been.

1.01    2008-07-30

    * Relicensed on request from the old Artistic License to "the same
      terms as Perl itself" (i.e. new Artistic/GPL).

      (No functional changes.)
2008-08-17 16:57:24 +00:00
he
d67adc0bc2 Update from version 2.22 to 2.23. Changes:
2.23 August 10 2008 - Major

    + Added Excel data validation with examples and test suite.
2008-08-17 12:58:29 +00:00
bjs
cdeeca638c Update to mpfr-2.3.1. Add new distribution patch, appease pkglint.
Changes from version 2.3.0 to version 2.3.1:

- Changes in the behavior of mpfr_strtofr and in its documentation
  concerning particular cases where the code and the documentation
  did not match.
- Bug fixes; see <http://www.mpfr.org/mpfr-2.3.0/#bugs>.
- Configure test for TLS support.
- Improved MPFR manual.
2008-08-17 07:59:13 +00:00
dholland
4d2acc70fa Use -fPIC. Fixes broken build on amd64 and probably others. 2008-08-17 07:02:39 +00:00
markd
584ff28626 fix typo. 2008-08-12 21:32:26 +00:00
markd
02eaa3a918 Tell libtool that its linking fortran so the correct libraries get linked
in.
2008-08-12 21:32:04 +00:00
markd
8748e4e0ee Tell libtool that its linking fortran so the correct libraries get
linked in.
2008-08-12 21:29:11 +00:00
he
abd19aa279 Update from version 2.010709 to 2.010800. Changes:
2.010800:
	Test suite was sub()ifying argument to sumnuminit().
	Test suite would not correctly sub()ify intnum() if limits had "()".
	Test suite calculated Pi Euler too early; Now only these fail
    t/55_intnum.t               51    1   1.96%  12
    t/55_ploth.t                34    1   2.94%  4

  # eval-noans: $oo=[  PARI(1) ];
  # eval-noans: setprecision(96)
  # eval-noans: $tab=intfuncinit($t,[-$oo,4.5],[$oo,4.5], sub{gamma(2+ I*$t)**3},1);
  # eval: intmellininvshort(2,4,$tab)-$A
  not ok 12 # in='intmellininvshort(2,4,$tab)-$A'
  #    out='-0.00162288630645762090148373314245888997812239836220952087633884330352714288074453852820714919691012-6.88133524E-101*I', type='Math::Pari'
  # pari==='-3.072350108 E-97 + 9.90717831 E-100*I'
  # re_out='\-3\.072350108,?\s*E\-97,?\s*\+,?\s*9\.90717831,?\s*E\-100\*I'

	Why this succeeds?
  # eval: intnum($x,-1,1, sub{intnum($y,-sqrt(1-$x**2),sqrt(1-$x**2),$x**2+$y**2,$tab)},$tab)- Pi/2
	Actually, $x**2+$y**2 is converted to a string as in '0.09+y^2',
	 which is interpreted by GP/PARI.
	Add warnings to the test suite for detection of #@_
	 in Perl-in-PARI-in-Perl calls.
	Attempt to support v5.10 (based on code contributed by ???)
2008-07-29 12:37:50 +00:00
he
057606a58c Update from version 2.01 to 2.05.
Pkgsrc change:
 o Convert to using Module::Build.

Upstream changes:

Changes in v2.05 - leto
Fri Feb 29 21:58:47 EST 2008
----------------------------
    * fix accidental use of "our" that broke old (like 5.5) Perl's
      Thanks to srezic@cpan.org for the first FAILed report
    * added $matrix->display_precision($n) to easily change the output
      to something a bit easier to read
        $a->display_precision(0)
      is useful for printing integer matrices nicely
    * NEED print_precision() docs near stringify
    * t/display_precision.t created
    * example/ directory created with some benchmark scripts

Changes in v2.04 - leto
Sat Feb 23 20:59:08 EST 2008
---------------------------
    * fixed pod errors
    * $a->length does row+col vectors now
    * converted all tests except ext1.t to Test::More and added
      some overall Kwalitee
    * fixed error with doing $string = $matrix . "\nStuff\n";
    * new funcion new_tridiag
    * $matrix->min and $matrix->max now return the min/max element of a matrix
    * new function new_random added which looks like (with default
      options shown)

    # returns $n x $m matrix of real numbers between 0 and 10
	new_random($n,$m, { symmetric => 0, tridiag => 0, bounded_by => [0,10], integer => 0 )

	new_random($n, %options ) # returns a square matrix

      This has proven to be pretty useful in the unit tests of
      Math::MatrixReal so I figured others may want an easy way to
      generate a random matrix of your own flavor

    * t/rand.t created
    * t/tridiag.t created
    * t/stringify.t created
    * t/minimax.t created
    * t/positive.t created
    * t/gsm.t created
    * t/similar.t created

Changes in v2.03 - leto
Sun Jan 27 13:19:55 EST 2008
---------------------------
    * now using Module::Build, so Math::MatrixReal should in theory be able to
      compile on systems without make, please test and let me know!
    * new concatenation operator ".", i.e $c = $a . $b concatenates two
      matrices side-by-side
    * t/concat.t created
    * new function assign_row
    * beginning of a test suite overhaul (converting to Test::More )

Changes in v2.02 - leto
Sat Jun 09 12:29:08 EDT 2007
----------------------------
    * Fixed the overloading for the division operator which did
      not recognize $a/2, reported by Daniel Brooks <db48x@yahoo.com>
    * Added support for matrix division notation, so that $a/$b =
      $a*$b**(-1) when $a and $b are square matrices
    * t/div.t created
2008-07-29 11:45:33 +00:00
he
cd2207c4fc Update from version 2.21 to 2.22. Changes:
2.22 July 19 2008 - Minor Beta

    + Added JPEG support.

    + Added 29_process_jpg.t test for jpg dimension processing.

    + Turned off compatibility_mode() in Spreadsheet::WriteExcel::Big
      which was on by accident.

    + Added "Warning about Office Service Pack 3" section to the
      docs to explain Excel warnings with duplicate data.

    + Expanded "Dates and Time in Excel" section of the docs.

    + Added isa() to _process_images() to allow subclassing.
      Reported by David Worenklein.
2008-07-27 18:33:55 +00:00
he
6be92eecd5 Add p5-Math-Random-MT-Perl. 2008-07-26 20:10:05 +00:00
he
39a7b0fcd2 Import p5-Math-Random-MT-Perl version 1.05.
Pure Perl implementation of the Mersenne Twister algorithm as
implemented in C/XS in Math::Random::MT. The output is identical
to the C/XS version. The Mersenne Twister is a 32 bit pseudorandom
number generator developed by Makoto Matsumoto and Takuji Nishimura.
The algorithm is characterised by a very uniform distribution but
is not cryptographically secure. What this means in real terms is
that it is fine for modeling but no good for crypto.
2008-07-26 20:09:16 +00:00
dbj
545c5feef7 set --disable-R-framework and --without-aqua
these options are only used by R.app on Mac OS X
2008-07-20 23:18:28 +00:00
obache
4bcf4907f1 Update grace to 5.1.22.
Patch provided by Aleksej Saushev in PR 38884.

5.1.22
Interface
 *  [DC] mention object type when asking for user's confirmation on delete

Parser
 *  [ES] added "LINCONV(set1, set2)" command - an equivalent of
         Transformations->Linear convolution
 *  [ES] added "VOIGT(gamma, sigma, x)" function (rep. #2144)

Bug fixes
 *  [ES] in the grace_np library GraceClose() could kill all user processes
         if by that time the Grace subprocess has exited (rep. #2035)
 *  [ES] certain hand-modified settings in project files might cause the GUI
         crash (incl. rep. #2139)
 *  [ES] ungraceful closing of anonymous pipes could result in high CPU load

5.1.21

Functionality
 *  [ES] added IsoLatin5 (ISO 8859-9) encoding file
 *  [ES] now honor locale in number stringifications (rep. #2109)
 *  [ES] extended range of prefixes in the Engineering format up to 10^{+/-24}
 *  [HR] added "Computing" tick label format

Interface
 *  [ES] added "-maxpath" command line option for setting maximal drawing
         path length
 *  [ES] allow for longer legend lines

Parser
 *  [ES] added "KILL BLOCK" command (deallocates the memory of the current
         block data)

Bug fixes
 *  [ES] there was a misleading error message when attempting to redefine an
         existing variable/keyword in the parser
 *  [ES] fixed rounding-off problem with zero labels (rep. #2098)

Portability/Compilation
 *  [IG] eliminated some of gcc-4.1 warnings (rep. #2111)
 *  [IG] man page cleaned (rep. #2110)

5.1.20

Parser
 *  [ES] added SGN() function

Defaults
 *  [ES] changed default major tick spacings to 0.2

Bug fixes
 *  [ES] command argument "-graphtype pie" wasn't recognized (rep. #2058)
 *  [ES] fixed openning of help documents when using an external browser
 *  [ES] "Geometric transforms" with order: "Rotate, scale, translate" in fact
         was doing "Translate, scale, rotate"
 *  [ES] Grace might crash when using "Engineering" tick label format
         (rep. #2094)
 *  [ES] file selection dialog wasn't closed when fit parameters file was
         read in successfully

5.1.19

Functionality
 *  [ES] BARDY and BARDYDY sets are now allowed in XY graphs

Bug fixes
 *  [RL] loading a DL module could fail with an irrelevant error message
         (rep. #2071)
 *  [ES] a bug in the PS driver caused CUPS to output empty page if printing
         accounting was enabled in foomatic (rep. #2047)
 *  [ES] automatic data point purging (enabled when set length exceeds "Max
         drawing path length" in Edit/Preferences) could fail silently
         (rep. #2069)
 *  [ES] the point purging could result in wrong set filling when fill to
         the baseline was selected
 *  [ES] configure's option --with-helpviewer was broken (rep. #1414)

5.1.18

Parser
 *  [ES] implemented concatenation of quoted strings and numerical expressions

Bug fixes
 *  [ES] some X font configurations could make Grace crash (rep. #1436)
 *  [ES] DEFAULT ... commands had no effect on new drawing objects (including
         rep. #1437)
 *  [ES] DEFAULT CHAR SIZE had no effect on tick labels of new axes

5.1.17

Drivers
 *  [ES] changed default resolution of the PDF driver to 300 dpi

Documentation/Info
 *  [ES] minor documentation updates, including rep. #1421

Bug fixes
 *  [ES] with page fill disabled, the page frame line might be drawn with
         wrong properties
 *  [ES] due to a bug in the Xbae widget, when a TrueType font was used,
         several dialogs could become unusable (including rep. #1366)
 *  [ES] enabling patterned fills and PDF-1.4 compatibility mode could result
         in crash when printing to PDF

5.1.16

Interface
 *  [ES] set scrolling of the custom ticks/labels table to 1 row per
         click (rep. #1419)

Documentation/Info
 *  [ES] updates relevant to the status of mailing lists/forums

Portability/Compilation
 *  [ES] PDF driver updated to work with PDFlib-6 (rep. #1426). Minimal
         supported version is now 5.0

Drivers
 *  [ES] added option to generate PDF-1.4 format (Acrobat5). Support for
         PDF-1.2 (Acrobat3) removed

Bug fixes
 *  [ES] replaced meaningless error message issued when trying to load data
         with a few string columns as a single set
 *  [ES] in the spreadsheet editor, the last entered cell's data wasn't
         committed (rep. #1420)

5.1.15

Functionality
 *  [ES] increased max number of custom tick marks/labels to 256 per a
         popular demand

Project files
 *  [ES] now using one-line format for saving graph's world and viewport
         settings

Defaults
 *  [ES] changed default external help viewer to mozilla

Documentation/Info
 *  [ES] misc documentation updates (including rep. #1411)

Bug fixes
 *  [ES] fixed crash when number of custom tick marks/labels exceeded 100
 *  [ES] fixed evaluation of FWHM in "Feature extraction" (old version
         might produce wrong results for multi-peak data)
 *  [ES] support for loadable functions of 4 and 5 parameters, introduced
         in 5.1.14, was incomplete
 *  [ES] in correlation/covariance, only the absolute value at 0 is
         normalized to 1, so for anti-correlation the sign is preserved
2008-07-18 17:22:47 +00:00
drochner
28428ead05 update to 5.22.3
changes:
-UI fix
-translation update
2008-07-15 11:15:21 +00:00
joerg
f605fec2db Mark as destdir ready. 2008-07-14 12:55:56 +00:00
drochner
14061e604b uses decorators -> Python>=2.4 2008-06-26 15:55:18 +00:00
markd
f740336d74 Explicitly disable java support so that it doesn't try, and fail, to build
it if configure script happens to find a java installed.
2008-06-23 20:54:44 +00:00
drochner
582b419cf4 update to 1.63
changes:
-direct support for polynomial arithmetic over GF(2)
-for loop can now handle >= 2**32 iterations
-bugfixes
2008-06-23 17:55:33 +00:00
drochner
a52feffd93 update to 1.0.3
changes: Fixes, optimizations, few new functions, few improvements to GUI
2008-06-23 17:16:56 +00:00
he
eafd64a812 Update from version 2.18 to 2.21. Changes:
2.21 March 9 2008 - Major

    ! Fixed bug where UTF-8 strings in formulas weren't handled.
      Thanks Sergey Zhuravlev.
      http://rt.cpan.org/Public/Bug/Display.html?id=30368

    ! Fixed collapse outlines compatibility with Gnumeric
      and OpenOffice.org.
      Reported by Barrie Slaymaker.
      http://rt.cpan.org/Public/Bug/Display.html?id=33662

    + Added outline_collapsed.pl example.

    + Added document section about rewriting Excel files.

    + Minor security fix to Format to avoid eval and
      additional fix for RT 24218.
      Thanks to Bram.

    + Added increased compatibility with third party
      Excel reading applications such as POI.

    + Added optional compatibility_mode() to fix problems
      that can occur with Office SP3.

    + Fixed compatibility problem with Google Docs.

    + Added set_start_page() method for setting the start page
      number when printing.


2.20 October 6 2007 - Major


    + Added autofilter() and filter_column() method and
      autofilter.pl example.

    + Added embed_chart() method to allow extracted chart
      templates to be embedded in a worksheet.
      Added demo4.pl and demo5.pl examples.

    + Added the insert_image() method and proper Excel 97
      style image handling for PNG and BMP.
      Images now work with Gnumeric and OpenOffice.
      insert_bitmap() is now deprecated.

    ! Made pane split optional when calling freeze_panes().
      Also renamed thaw_panes() as split_panes(). The old
      method name is still available, but deprecated.

    ! Renamed write_unicode() and write_unicode_le() methods
      to the more explicit write_utf16be_string() and
      write_utf16le_string(). The old method names are
      still available, but deprecated.


2.19 June 14 2007 - Major

    + Beta testing only. Not released to CPAN.
2008-06-22 17:08:54 +00:00
joerg
9368f361a6 Fix build with f2c. 2008-06-21 19:31:03 +00:00
minskim
90d5abf001 Update mathomatic to 14.0.5.
Major changes since 12.8.0:
- Improved the "solve verify" command option.
- Added "derivative nosimplify" command option.
- Added "simplify sign" command option.
- More correct simplification restriction added.
- Disallow variable name "all" in expressions.
- Turned off readline file name completion.
- Implemented integral divide operator "//".
2008-06-21 17:23:26 +00:00
minskim
477c60fa06 Update ruby-rb-gsl to 1.10.3.
Major changes since 1.9.2:
* GSL-1.10 support
  * Generalized eigensystems
  * Cholesky routines to complex matrices
  * and more
* NDLINEAR extension support: multi-linear,
  multi-parameter least squares fitting
2008-06-20 15:34:33 +00:00
joerg
3b0d97b0de Add DESTDIR support. 2008-06-20 01:09:05 +00:00
taca
acb340db2a - Switch to use vendor_dir with Ruby 1.8.7.
- Compile with gsl-1.11 (and maybe later).

Bump PKGREVISION.
2008-06-19 14:51:16 +00:00
joerg
ba171a91fa Add DESTDIR support. 2008-06-12 02:14:13 +00:00
wiz
eda4f2e041 + mprime-bin. 2008-06-02 13:36:53 +00:00
wiz
f51aec788b Remove import with wrong dir (now in mprime-bin). 2008-06-02 13:36:41 +00:00
wiz
235b5b54f2 Import mprime-bin-24.14 as math/mprime-bin.
This program is used to find Mersenne Prime numbers.  See
http://www.utm.edu/research/primes/mersenne.shtml for a good
description of Mersenne primes.  Mersenne numbers can be proved
composite (not prime) by either finding a factor or by running
a Lucas-Lehmer primality test.
2008-06-02 12:40:48 +00:00
wiz
49a1364162 Import mprime-bin-24.14 as math/mprime.
This program is used to find Mersenne Prime numbers.  See
http://www.utm.edu/research/primes/mersenne.shtml for a good
description of Mersenne primes.  Mersenne numbers can be proved
composite (not prime) by either finding a factor or by running
a Lucas-Lehmer primality test.
2008-06-02 12:40:16 +00:00
drochner
5a1bc43f73 update to 0.5.15
changes: feature extensions and fixes
2008-05-29 17:59:25 +00:00
drochner
3ab6eb1564 update to 2.12.3.3
changes: minor fixes (Darwin and build system)
2008-05-29 17:56:35 +00:00
drochner
ffecd78c3b update to 1.8.3
changes: bugfixes
2008-05-29 17:19:14 +00:00
drochner
3eea94623d update to 5.22.2
changes:
-bugfixes
-translation updates
2008-05-29 16:46:13 +00:00
tnn
8aa19c3bca Mark some packages as NOT_FOR_BULK_PLATFORM= Linux-*-*
Addresses PR pkg/38368 and PR pkg/38371
2008-05-26 22:25:25 +00:00
joerg
3d8ef5a52d Second round of explicit pax dependencies. As reminded by tnn@,
many packages used to use ${PAX}. Use the common way of directly calling
pax, it is created as tool after all.
2008-05-26 02:13:14 +00:00
bjs
cc2c07ed27 Mark this package MAKE_JOBS_SAFE=no. 2008-05-06 06:17:15 +00:00
drochner
bd8158d626 +py-sympy 2008-05-05 19:11:35 +00:00
drochner
1db6744951 import py-sympy-0.5.14, a Python library for symbolic calculations 2008-05-05 19:10:02 +00:00
drochner
b4f2312ddb update to 2.67
changes: some fixes and cleanup
2008-05-05 19:07:08 +00:00
drochner
584fd2cca4 update to 2.12.3.0 (most recent stable release)
changes:
-build system improvements
-Fixed bug where a FILEPOS was copied FPOS_POS_BITS octets instead of
 FPOS_POS_LEN octets.
-documentation improvements
2008-05-05 18:54:05 +00:00
adam
46fbc52a40 Changes 3.0.1:
* This is a bug-fixing release.
2008-05-02 08:50:46 +00:00
adam
f8ed52d2fc Changes 1.11:
* Upgraded to latest libtool, autoconf and automake (libtool-2.2,
  autoconf-2.61, automake-1.10.1)
* Fixed underflow in ODE adaptive step size controller that could
  cause step size to decrease to zero.
* Improved the handling of the asymptotic regime in gsl_sf_bessel_jl.
* Improved the handling of large arguments in cumulative distribution
  functions using the incomplete beta function, such as gsl_cdf_fdist_P.
* Fixed overflow bug in gsl_cdf_hypergeometric_{P,Q} for large
  arguments.
* gsl_ran_gaussian_ziggurat now handles generators with different
  ranges explicitly, to minimise the number of function calls
  required.
* Added missing error terms in gsl_sf_exp_mult_e10_e to prevent
  the error being underestimated.
* Updated some constants to the CODATA 2006 values.
* The hypergeometric function gsl_sf_hyperg_2F1 now handles the case
  where x==1.
* Fixed a bug in the brent minimiser which prevented optimal convergence.
* Added functions for evaluating complex polynomials
* The convergence condition for gsl_multiroots_test_delta now accepts
  dxi == 0.
* Improved functions gsl_ldexp and gsl_frexp to handle the full range
  of double precision numbers in all cases.
* Added new quasi random generators gsl_qrng_halton and
  gsl_qrng_reversehalton which support dimensions up to 1229.
* Added function gsl_multifit_linear_residuals for computing the
  residuals of the fit
2008-05-02 08:49:50 +00:00
markd
6990810160 Update to match R 2.7.0 2008-04-26 02:41:00 +00:00
markd
680677a5f3 Update to 2.7.0
SIGNIFICANT USER-VISIBLE CHANGES

    o   The default graphics device in non-interactive use is now
        pdf() rather than postscript().  [PDF viewers are now
        more widely available than PostScript viewers.]

        The default width and height for pdf() and bitmap() have been
        changed to 7 (inches) to match the screen devices.

    o   Most users of the X11() device will see a new device that has
        different fonts, anti-aliasing of lines and fonts and
        supports semi-transparent colours.

    o   Considerable efforts have been made to make the default output
        from graphics devices as similar as possible (and in
        particular close to that from postscript/pdf).  Many devices
        were misinterpreting 'pointsize' in some way, for example as
        being in device units (pixels) rather than in points.

    o   Packages which include graphics devices need to be re-installed
        for this version of R, with recently updated versions.

+ New features and bug fixes.
2008-04-26 02:39:27 +00:00