ed400565a2
brook at biology dot nmsu dot edu and his team at NMSU. COALESCE fits the model which has a single population of constant size, and estimates 4Nu, where N is the effective population size and u is the neutral mutation rate per site.
31 lines
923 B
Text
31 lines
923 B
Text
$NetBSD: patch-aa,v 1.1.1.1 2003/09/30 01:03:56 jschauma Exp $
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--- Makefile.orig 1996-02-29 11:00:09.000000000 -0500
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+++ Makefile 2003-09-29 20:51:32.000000000 -0400
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@@ -1,20 +1,20 @@
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LIBS = -lm
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BINDIR = ./bin
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-CFLAGS = -g
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-CC = cc $(CFLAGS)
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+#CFLAGS = -g
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+#CC = cc $(CFLAGS)
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DCC = gcc -g -DDMALLOC_FUNC_CHECK -ansi -pedantic
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DLIBS = -lm -L/usr/local/lib -ldmalloc
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# -O
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PROGS = coalesce fluctuate
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coalesce : coalesce.c constants.h lamarc.h
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- $(CC) coalesce.c $(LIBS) -o coalesce
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+ $(CC) ${CFLAGS} coalesce.c ${LDFLAGS} $(LIBS) -o coalesce
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modellike.o : modellike.c
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- $(CC) -c modellike.c
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+ $(CC) ${CFLAGS} -c modellike.c
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fluctuate.o : fluctuate.c
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- $(CC) -c fluctuate.c
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+ $(CC) ${CFLAGS} -c fluctuate.c
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fluctuate : fluctuate.o modellike.o
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- $(CC) fluctuate.o modellike.o $(LIBS) -o fluctuate
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+ $(CC) ${CFLAGS} fluctuate.o modellike.o ${LDFLAGS} $(LIBS) -o fluctuate
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