39 lines
1 KiB
Makefile
39 lines
1 KiB
Makefile
# $NetBSD: Makefile,v 1.2 2019/05/01 12:38:54 bacon Exp $
|
|
|
|
DISTNAME= kallisto-${PV}
|
|
PKGREVISION= 1
|
|
CATEGORIES= biology
|
|
MASTER_SITES= ${MASTER_SITE_GITHUB:=pachterlab/}
|
|
GITHUB_TAG= v${PV}
|
|
|
|
MAINTAINER= bacon@NetBSD.org
|
|
HOMEPAGE= https://pachterlab.github.io/kallisto/
|
|
COMMENT= Quantify abundances of transcripts from RNA-Seq data
|
|
LICENSE= 2-clause-bsd
|
|
|
|
USE_LANGUAGES= c c++
|
|
USE_TOOLS+= pax
|
|
USE_CMAKE= yes
|
|
|
|
SUBST_CLASSES+= test
|
|
SUBST_STAGE.test= post-build
|
|
SUBST_FILES.test= kallisto-test
|
|
SUBST_SED.test= -e 's|/usr/local/share/kallisto|${DATADIR}|g'
|
|
|
|
PV= 0.45.0
|
|
DATADIR= ${PREFIX}/share/kallisto
|
|
|
|
INSTALLATION_DIRS= bin ${DATADIR}
|
|
|
|
post-extract:
|
|
${CP} ${FILESDIR}/kallisto-test ${WRKSRC}
|
|
|
|
post-install:
|
|
${INSTALL_SCRIPT} ${WRKSRC}/kallisto-test ${DESTDIR}${PREFIX}/bin
|
|
cd ${WRKSRC} && pax -rw test ${DESTDIR}${DATADIR}
|
|
|
|
.include "../../biology/htslib/buildlink3.mk"
|
|
.include "../../devel/hdf5/buildlink3.mk"
|
|
.include "../../archivers/libaec/buildlink3.mk"
|
|
.include "../../devel/zlib/buildlink3.mk"
|
|
.include "../../mk/bsd.pkg.mk"
|