pkgsrc/biology/py-cutadapt/distinfo
adam 066be082ec py-cutadapt: updated to 3.5
v3.5 (2021-09-29)
-----------------

* :issue:`555`: Add support for dumping statistics in JSON format using ``--json``.
* :issue:`541`: Add a "Read fate breakdown" section heading to the report, and also
  add statistics for reads discarded because of ``--discard-untrimmed`` and
  ``--discard-trimmed``. With this, the numbers in that section should add up to 100%.
* Add option ``-Q``, which allows to specify a quality-trimming threshold for R2 that is
  different from the one for R1.
* :issue:`567`: Add ``noindels`` adapter-trimming parameter. You can now write
  ``-a "ADAPTER;noindels"`` to disallow indels for a single adapter only.
* :issue:`570`: Fix ``--pair-adapters`` not finding some pairs when reads contain
  more than one adapter.
* :issue:`524`: Fix a memory leak when using ``--info-file`` with multiple cores.
* :issue:`559`: Fix adjacent base statistics not being shown for linked adapters.
2022-01-17 09:03:10 +00:00

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$NetBSD: distinfo,v 1.6 2022/01/17 09:03:10 adam Exp $
BLAKE2s (cutadapt-3.5.tar.gz) = acfca3b84b2ef7d1cf030b288dd4ea464f8c3243c1566a354f5113a92c2799a1
SHA512 (cutadapt-3.5.tar.gz) = 7ffb2afc1fd57cd30c4c618db0c1c3dde3803bff19709b158537a46c50b4ddc367abf5707e876f139ba5ad1dc18122fa5b69a1db019c03ed7b605cfbb222ef66
Size (cutadapt-3.5.tar.gz) = 303774 bytes