38 lines
1.2 KiB
Makefile
38 lines
1.2 KiB
Makefile
# $NetBSD: Makefile,v 1.20 2012/10/03 21:53:59 wiz Exp $
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#
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DISTNAME= MUMmer3.20
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PKGNAME= mummer-3.20
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PKGREVISION= 1
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CATEGORIES= biology
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MASTER_SITES= ${MASTER_SITE_SOURCEFORGE:=mummer/}
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MAINTAINER= hdp@cs.nmsu.edu
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HOMEPAGE= http://mummer.sourceforge.net/
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COMMENT= System for aligning whole genome sequences
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WRKSRC= ${WRKDIR}/${DISTNAME}
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USE_TOOLS+= csh:run gmake perl:run pax
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USE_LANGUAGES= c c++
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MAKE_ENV+= SH=${SH:Q}
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MAKE_ENV+= PERL=${PERL5:Q}
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MAKE_ENV+= CSH=${TOOLS_PATH.csh:Q}
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INSTALLATION_DIRS= bin share/doc/mummer share/mummer
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do-install:
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.for p in annotate combineMUMs delta-filter gaps mgaps mummer \
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repeat-match show-aligns show-coords show-snps show-tiling
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${INSTALL_PROGRAM} ${WRKSRC}/${p} ${DESTDIR}${PREFIX}/bin
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.endfor
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.for p in postnuc postpro prenuc prepro
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${INSTALL_PROGRAM} ${WRKSRC}/aux_bin/${p} ${DESTDIR}${PREFIX}/bin
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.endfor
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.for f in run-mummer1 run-mummer3 nucmer promer exact-tandems \
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mapview mummerplot nucmer2xfig dnadiff
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${INSTALL_SCRIPT} ${WRKSRC}/${f} ${DESTDIR}${PREFIX}/share/mummer
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.endfor
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cd ${WRKSRC}/docs && pax -wr -s ',^Makefile$$,,' * \
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${DESTDIR}${PREFIX}/share/doc/mummer
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.include "../../mk/bsd.pkg.mk"
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