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pkgsrc/math
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wen a30663e530 Update to 2.18.1 
Upstream changes:
v.2.18.1 (24 December 2018)
======================================================================
Bugfix release - major bug in threading where certain thread count and
job size combinations could result in incorrect output. See
https://discourse.mc-stan.org/t/bug-in-map-rect-with-threading-in-stan-2-18-0/7056
for more details.

Bug Fixes
--------------------------------------------------
* Fix threading batch size bug (#1075)

v.2.18.0 (13 July 2018)
======================================================================
This is our first release with parallelism (through C++11 threads or MPI)!

New Features
--------------------------------------------------
* Support for MPI parallelization with map_rect
* Support for threaded AD and a threaded map_rect implementation (#809)
* New periodic covariance function (#921)
* Integrated Boost's 1 dimensional integrator (#913)
* Added thin QR decomposition (#900)
* New `add_diag` function for adding a real or vector to the diagonal of a matrix (#871)
* New `log_inv_logit_diff` function for the log of the difference of two inverse logits (#856)
* New dot product kernel for GPs (#834)
* Vectorized many more RNGs (#833, #722, #622)
* Add `matrix_exp_action` to calculate `exp(At)*B` (#830)
* `log_mix` vectorized (#751, #664)
* New integrators from CVODES (`integrate_ode_adams`, `_bdf`) (#735)
* New `std_normal` (#609)
* New `std_normal_log` (#728)
* New GLM primitive `normal_id_glm` (#665)
* New `chol2inv` that computes a matrix's inverse from its Cholesky factor (#649)
* New `poisson_log_glm` poisson regression with log link (#647)
* New vectorized `ordered_probit` (#645)
* New `log_modified_bessel_first_kind` that expands where Bessel 1 function can be used (#640)
* New bernoulli logit GLM (#608)

Bug Fixes
--------------------------------------------------
* Rising and falling factorial were not accepting negative arguments (#636)
* Fix normalizing constant for LKJ distribution (#628)

Other
--------------------------------------------------
* Tweaks to `effective_sample_size` for performance and upstream compatibility (#865)
* Switch to sundials package combining CVODES and IDAS, updating versions (#779, #744)
* Now publishing the Math doxygen (http://mc-stan.org/math/)
* Faster `dirichlet_lpdf` accepting more vector types (#788)
* Upgrade to Boost 1.66 (#766)
* Improved derivatives for Gamma CDF (#780)
* Sped up `multi_normal_cholesky` (#753)
* More efficient `mdivide_right_tri` (#715)
* More efficient `integrate_ode_rk45_grad_test` (#714)
* Make algebraic solver easier to use (#703, #697)
* Begin thinking about internal compatibility for complex numbers (#643)
* Faster `pow` (#642)
2019-03-10 02:33:05 +00:00
..
aamath
abs
admesh
algae
amath Update math/amath to 1.8.3 2017-07-25 12:26:05 +00:00
analitza revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
antixls Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
aribas
arpack Multiple packages: Replace obsolete maintainer email 2019-01-13 22:06:42 +00:00
bc
bcal bcal: Import bcal-2.1 as math/bcal 2018-12-15 17:25:15 +00:00
blas math/lapack: Restore build on DragonFly 2016-12-03 15:37:34 +00:00
blitz++
boolstuff Comment out dead sites. 2017-08-16 20:45:30 +00:00
calc Follow some http redirects. 2017-08-16 20:21:03 +00:00
calcoo Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
cantor revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
capc-calc capc-calc: update to 2.12.7.1 and fix darwin compile 2018-12-31 16:35:25 +00:00
cgal revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
classias Fix indentation in buildlink3.mk files. 2018-01-07 13:03:53 +00:00
clisp-pari sort 2016-06-11 23:29:35 +00:00
cln Fix indentation in buildlink3.mk files. 2018-01-07 13:03:53 +00:00
cloog Updated cloog to 0.18.4. 2016-10-09 19:46:52 +00:00
coinmp
crfsuite Fix indentation in buildlink3.mk files. 2018-01-07 13:03:53 +00:00
dcdflib.c Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
dcdflib.f Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
dfftpack Extend SHA512 checksums to various files I have on my local distfile 2017-03-23 17:06:45 +00:00
dieharder Extend SHA512 checksums to various files I have on my local distfile 2017-03-23 17:06:45 +00:00
djbfft
djbsort We don't install multiple architectures, so don't build them. Bump 2018-08-09 09:14:16 +00:00
eigen2
eigen3 Update to 3.3.7 2019-03-09 14:14:39 +00:00
eispack Extend SHA512 checksums to various files I have on my local distfile 2017-03-23 17:06:45 +00:00
ess Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
eukleides
eukleides10
euler Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
extcalc Recursive bumps for fontconfig and libzip dependency changes. 2018-03-12 11:15:24 +00:00
fftpack Extend SHA512 checksums to various files I have on my local distfile 2017-03-23 17:06:45 +00:00
ffts Update math/ffts to 20170617. 2017-07-04 19:51:42 +00:00
fftw Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
fftw2 Convert all occurrences (353 by my count) of 2017-01-19 18:52:01 +00:00
fftwf Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
fgmp Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
fityk Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
fricas Update to FriCAS 1.3.1 2017-04-13 14:35:31 +00:00
galculator Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
gap Convert all occurrences (353 by my count) of 2017-01-19 18:52:01 +00:00
gcalctool Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
geg Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
genius Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
glpk GLPK 4.63: 2017-08-18 21:47:51 +00:00
gnome-calculator revbump after updating textproc/icu 2018-12-09 18:51:58 +00:00
gnumeric112 gnumeric112: add two patches to fix clang build 2019-01-15 12:05:56 +00:00
go-stats all: revbump Go packages, now that they use go112 to build 2019-03-09 10:05:01 +00:00
go-units all: revbump Go packages, now that they use go112 to build 2019-03-09 10:05:01 +00:00
gp-autpgrp Sort PLIST files. 2018-01-01 22:29:15 +00:00
gp-factint Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
gp-fplsa Comment out dead sites. 2017-08-16 20:45:30 +00:00
gp-grape Comment out dead sites. 2017-08-16 20:45:30 +00:00
gp-grpconst Sort PLIST files. 2018-01-01 22:29:15 +00:00
gp-lag Sort PLIST files. 2018-01-01 22:29:15 +00:00
grace revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
graphopt Mark packages that require C++03 (or the GNU variants) if they fail with 2018-07-18 00:06:10 +00:00
grpn Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
gsl gsl: updated to 2.5 2018-10-02 12:10:29 +00:00
gtklife Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
harminv recursive bump after mpfr shlib major bump 2018-01-28 16:24:10 +00:00
heirloom-factor
heirloom-units
herisvm Update herisvm to 0.8.0 2017-02-17 11:12:15 +00:00
hs-distributive
hs-mwc-random
hs-nats
hs-scientific
hs-semigroups
ipopt Mark packages that require C++03 (or the GNU variants) if they fail with 2018-07-18 00:06:10 +00:00
isl Updated isl to 0.17.1. 2016-10-06 22:03:56 +00:00
itpp Follow some http redirects. 2017-08-16 20:21:03 +00:00
kalgebra revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
kcalc revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
lapack LAPACK: build deprecated functions. Allows me to build unmodified 2018-08-12 15:02:04 +00:00
libffm Sort PLIST files. 2018-01-01 22:29:15 +00:00
libint
libixion libixion: bump dependency version in buildlink3.mk 2019-02-22 06:15:50 +00:00
liblbfgs Fix indentation in buildlink3.mk files. 2018-01-07 13:03:53 +00:00
liblinear liblinear: follow redirects 2017-11-15 22:12:56 +00:00
libmatheval Note error message from building with guile 2.0 2016-09-16 00:37:02 +00:00
libnumbertext Fix build for math/libnumbertext on netbsd-7 2019-01-17 15:56:05 +00:00
libshorttext libshorttext: follow redirects 2017-11-15 22:13:24 +00:00
libsvm math/libsvm: Fix install_name on Darwin 2018-10-25 21:46:03 +00:00
linpack Extend SHA512 checksums to various files I have on my local distfile 2017-03-23 17:06:45 +00:00
lp_solve Fix indentation in buildlink3.mk files. 2018-01-07 13:03:53 +00:00
ltm Update ltm (libtommath) to 1.0.1 to get MP_GEN_RANDOM_MAX etc 2017-09-26 14:34:23 +00:00
mapm Mark packages that require C++03 (or the GNU variants) if they fail with 2018-07-18 00:06:10 +00:00
mathomatic Replaced $(ROUND) with ${CURLY} variable references. 2018-01-01 18:16:35 +00:00
maxima Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
mcsim
meschach
metis
minisat Mark packages that require C++03 (or the GNU variants) if they fail with 2018-07-18 00:06:10 +00:00
minpack Extend SHA512 checksums to various files I have on my local distfile 2017-03-23 17:06:45 +00:00
mpcomplex Update to 1.1.0 2018-01-29 14:49:15 +00:00
mpfr mpfr: update to 4.0.2. 2019-02-13 22:26:50 +00:00
mprime-bin
mtl Replaced $(ROUND) with ${CURLY} variable references. 2018-01-01 18:16:35 +00:00
muparser muparser: Fix SunOS linker flags and naming. 2018-01-26 09:48:46 +00:00
newmat Don't check pointer sign. 2016-12-17 23:31:35 +00:00
nickle nickle: update to 2.84. 2018-12-02 06:49:24 +00:00
nlopt Fix indentation in buildlink3.mk files. 2018-01-07 13:03:53 +00:00
ntl Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
ocaml-num Revbumps associated with update of lang/ocaml. 2018-11-12 16:10:16 +00:00
ocaml-zarith Removed obsolete patch from math/ocaml-zarith 2018-11-28 12:07:09 +00:00
octave Update to 5.1.0 2019-03-05 11:11:12 +00:00
odepack Extend SHA512 checksums to various files I have on my local distfile 2017-03-23 17:06:45 +00:00
openaxiom Mark packages that require C++03 (or the GNU variants) if they fail with 2018-07-18 00:06:10 +00:00
openfst Mark packages that require C++03 (or the GNU variants) if they fail with 2018-07-18 00:06:10 +00:00
ordCalc Pointers are not ordered relative to 0, so compare the elements 2017-02-14 21:27:04 +00:00
otter
p5-Algorithm-BloomFilter Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Algorithm-Cluster Update to 1.57 2019-01-12 04:07:08 +00:00
p5-Algorithm-Munkres Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Alien-GMP Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Excel-Template Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Excel-Template-Plus Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Base-Convert Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Base36 Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Base85 Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-BaseCnv Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Bezier Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-BigInt Update to 1.999816 2019-01-12 04:35:20 +00:00
p5-Math-BigInt-GMP Update to 1.6006 2019-01-12 04:21:35 +00:00
p5-Math-BigInt-Pari Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-BigInteger Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Calc-Units Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Complex Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Derivative Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-FFT Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-GMP Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Int64 Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Interpolate Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Matrix Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-MatrixReal Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Pari Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Permute-List Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Prime-Util Update to 0.73 2019-01-12 12:50:10 +00:00
p5-Math-Random Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Random-ISAAC Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Random-ISAAC-XS Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Random-MT Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Random-MT-Auto Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Random-MT-Perl Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Round Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Spline Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Systems Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Math-Utils Update to 1.13 2018-11-10 10:00:39 +00:00
p5-Math-VecStat Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Number-Compare Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Number-Latin Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Number-Range Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Number-Tolerant Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Number-WithError Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Roman Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Set-Crontab Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Set-Infinite Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Spreadsheet-ParseExcel Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Spreadsheet-Read p5-Spreadsheet-Read: update to 0.79. 2018-09-02 07:31:06 +00:00
p5-Spreadsheet-ReadSXC Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Spreadsheet-WriteExcel Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Spreadsheet-XLSX Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Statistics-CaseResampling Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Statistics-Descriptive Update to 3.0702 2018-11-10 09:58:03 +00:00
p5-Statistics-Distributions Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Statistics-TTest Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
p5-Test-Number-Delta Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
pari Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
pari-galdata
pari23 Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
pcg
pear-Math_BigInteger Update pear-Math_BigInteger to 1.0.3. 2017-05-28 11:26:12 +00:00
pear-Numbers_Roman
pear-Numbers_Words math/pear-Numbers_Words: update to 0.18.2 2018-02-28 16:01:41 +00:00
php-bcmath
php-stats Drop support for php70 2019-01-14 13:06:10 +00:00
ppl Update to 1.2 2019-02-09 13:05:16 +00:00
prng
pspp Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
py-abcpmc Don't include py-funcsig for Python older than 3.3. 2016-10-12 19:51:45 +00:00
py-almost Switch to MASTER_SITES_PYPI. 2016-06-08 17:43:20 +00:00
py-asteval py-asteval: updated to 0.9.13 2018-10-11 10:07:04 +00:00
py-autograd py-autograd: update to 1.1.13 2017-10-08 20:22:46 +00:00
py-bottleneck Bottleneck is a collection of fast NumPy array functions written in C. 2017-06-07 08:12:47 +00:00
py-cdecimal extend PYTHON_VERSIONS_ for Python 3.7 2018-07-03 05:03:01 +00:00
py-claripy Import py-claripy version 7.8.2.21 from wip 2018-03-15 02:24:18 +00:00
py-ephem py-ephem: updated to 3.7.6.0nb1 2018-01-11 14:31:20 +00:00
py-fftw extend PYTHON_VERSIONS_ for Python 3.7 2018-07-03 05:03:01 +00:00
py-fpconst extend PYTHON_VERSIONS_ for Python 3.7 2018-07-03 05:03:01 +00:00
py-gmpy py-gmpy: updated to 1.17 2018-01-11 07:59:47 +00:00
py-infinity py-infinity: update to 1.4 2017-09-27 20:21:54 +00:00
py-intervals py-intervals: updated to 0.8.1 2017-12-10 17:01:48 +00:00
py-kiwisolver py-kiwisolver: added version 1.0.1 2018-04-14 11:35:23 +00:00
py-lmfit py-lmfit: updated to 0.9.12 2018-12-03 20:41:44 +00:00
py-mpmath py-mpmath: updated to 1.0.0 2018-01-11 08:07:44 +00:00
py-munkres py-munkres: updated to 1.0.12 2018-12-10 11:22:37 +00:00
py-networkx py-networkx: updated to 2.2 2018-11-30 10:37:07 +00:00
py-noise Follow some redirects. 2017-09-04 18:08:18 +00:00
py-numarray extend PYTHON_VERSIONS_ for Python 3.7 2018-07-03 05:03:01 +00:00
py-numba py-numba: updated to 0.42.0 2019-01-02 15:43:10 +00:00
py-Numeric extend PYTHON_VERSIONS_ for Python 3.7 2018-07-03 05:03:01 +00:00
py-numexpr py-numexpr: updated to 2.6.9 2018-12-22 09:38:19 +00:00
py-numpy py-numpy: updated to 1.16.2 2019-03-04 09:09:46 +00:00
py-pandas py-pandas: updated to 0.23.4 2018-08-10 09:00:36 +00:00
py-pandas-datareader math/py-pandas-datareader: Update to 0.7.0 2018-09-24 03:59:41 +00:00
py-patsy py-patsy: updated to 0.5.1 2018-11-20 13:31:03 +00:00
py-powerlaw py-powerlaw: updated to 1.4.5 2018-10-07 07:02:39 +00:00
py-pymc3 math/py-pymc3: Update to 3.5 2018-07-23 01:37:54 +00:00
py-pywavelets py-pywavelets: Add version 0.5.2 2017-11-22 11:06:23 +00:00
py-quadprog matg/py-quadprog: Import version 0.1.6 2017-10-12 16:37:00 +00:00
py-roman py-roman: updated to 3.1 2018-12-04 12:59:58 +00:00
py-rpy py-rpy: updated to 2.9.1 2017-11-28 09:07:23 +00:00
py-Scientific revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
py-Scientific-doc Comment out dead MASTER_SITES/HOMEPAGEs. 2017-09-03 08:36:49 +00:00
py-scikit-image py-scikit-image: update to 0.14.1 2018-11-13 09:57:10 +00:00
py-scikit-learn *: update email for fhajny 2018-12-15 21:12:18 +00:00
py-scipy py-scipy: add upstream bug reports 2018-09-03 09:04:24 +00:00
py-simpleeval py-simpleeval: updated to 0.9.8 2018-11-14 10:26:59 +00:00
py-statsmodels py-statsmodels: updated to 0.9.0 2018-07-05 13:09:11 +00:00
py-sympy Update py-sympy to 1.2 2018-07-19 20:15:36 +00:00
py-tables py-tables: (ex py-pytables) updated to 3.4.4 2018-07-04 06:46:49 +00:00
py-tensorboard math/py-tensorboard: Import version 1.7.0 2018-04-06 19:22:41 +00:00
py-Theano py-Theano: updated to 1.0.3 2018-12-16 14:54:39 +00:00
py-z3 py-z3: set GITHUB_PROJECT to fix fetch stage 2018-12-23 12:27:34 +00:00
py-z3solver Really correct the PKGNAME 2018-03-20 16:24:34 +00:00
qalculate *: Move SUBST_STAGE from post-patch to pre-configure 2018-07-04 13:40:07 +00:00
qalculate-bases Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
qalculate-currency Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
qalculate-gtk Revbump for libcanberra gstreamer change. 2018-11-29 11:21:45 +00:00
qalculate-units Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
qhull
quadpack Extend SHA512 checksums to various files I have on my local distfile 2017-03-23 17:06:45 +00:00
R Update to 3.5.2 2018-12-21 02:55:06 +00:00
R-abind Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-akima Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-aplpack Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-bbmle Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-bitops Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-car Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-carData Import carData-3.0.2 as math/R-carData. 2018-12-21 10:37:20 +00:00
R-CGIwithR Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
R-chron Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-circular Update to 0.4.93 2018-08-30 12:56:34 +00:00
R-classInt Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-clim.pact Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-coda Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-combinat Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-DAAG Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-date math/R-date: Update to 1.2-38 2018-05-06 03:28:35 +00:00
R-DBI math/R-DBI: Update to 1.0.0 2018-05-09 18:08:19 +00:00
R-e1071 Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-emdbook Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-FNN Update to 1.1.2.2 2018-12-21 02:59:50 +00:00
R-forecast Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-fracdiff Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-gdata Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
R-genetics Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
R-geoR Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-geoRglm Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-GRASS Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-gss Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-gstat Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-gtable Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-gtools Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-httpRequest Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-hwde Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-igraph math/R-igraph: Needs a C compiler 2018-09-04 00:23:12 +00:00
R-intervals Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-ISLR Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-ISwR Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-lme4 Update to 1.1.19 2018-12-21 12:53:49 +00:00
R-lmm Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-lmtest Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-mapproj Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-maps Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-MatrixModels Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-minqa Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-moonsun math/R-moonsun: Import version 0.1.3 2018-06-05 22:58:29 +00:00
R-mvtnorm Update to 1.0.8 2018-08-30 12:52:22 +00:00
R-ncdf revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
R-nloptr Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-numDeriv Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-pbkrtest Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-PHYLOGR Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-pixmap Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-plyr Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-poweRlaw Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-prettyunits math/R-prettyunits: Import version 1.0.2 2018-04-13 15:26:31 +00:00
R-prob Add the CRAN archives to R package MASTER_SITES. 2018-07-28 14:53:46 +00:00
R-quadprog Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-quantreg Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-R2HTML Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-RandomFields Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-randomForest Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-RArcInfo Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-Rcmdr Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-RColorBrewer Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-RcppArmadillo Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-RcppEigen Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-reshape2 Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-RNetCDF revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
R-RPostgreSQL Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-sgeostat Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-shapefiles Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-sp Update to 1.3.1 2018-12-21 10:53:51 +00:00
R-spacetime Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-SparseM Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-splancs Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-stabledist Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-statmod Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-tibble Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-VGAM Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-wle Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-XML Remove MASTER_SITES= from individual R package Makefiles. 2018-07-28 14:40:42 +00:00
R-xtable Update to 1.8.3 2018-08-30 12:36:31 +00:00
R-xts Update to 0.11.0 2018-08-30 12:27:57 +00:00
R-zoo Update to 1.8.3 2018-08-30 12:19:26 +00:00
randlib Extend SHA512 checksums to various files I have on my local distfile 2017-03-23 17:06:45 +00:00
ranger Fix pthread use. 2016-08-26 17:17:22 +00:00
ruby-gsl Update ruby-gsl to 2.1.0.3. 2017-06-05 14:30:51 +00:00
ruby-narray Relax patten in GEM_CLEANBUILD. 2017-06-02 04:16:35 +00:00
ruby-roo math/ruby-roo: update to 2.8.2 2019-02-06 15:30:56 +00:00
ruby-spreadsheet math/ruby-spreadsheet: update to 1.2.0 2019-02-25 16:50:23 +00:00
sc
sc-im sc-im: Add xls option and add it to suggested option 2019-02-11 22:01:18 +00:00
scilab Revbumps associated with update of lang/ocaml. 2018-11-12 16:10:16 +00:00
slatec
snns Sort PLIST files. 2018-01-01 22:29:15 +00:00
speedcrunch Recursive bumps for fontconfig and libzip dependency changes. 2018-03-12 11:15:24 +00:00
stan-math Update to 2.18.1 2019-03-10 02:33:05 +00:00
statist Follow some redirects. 2017-09-04 18:08:18 +00:00
sundials Update to 4.1.0 2019-03-10 02:30:06 +00:00
superlu Recursive bump for perl5-5.28.0 2018-08-22 09:42:51 +00:00
svmlin Import svmlin, semi-supervised machine learning tool 2016-07-30 15:13:57 +00:00
tasp-vsipl Sort PLIST files. 2018-01-01 22:29:15 +00:00
teapot needs EXTENSIONS for siginfo_t on SunOS 2017-07-02 11:12:01 +00:00
tex-apnum tex-apnum{,-doc}: update to 1.7 2019-01-22 12:22:18 +00:00
tex-apnum-doc tex-apnum{,-doc}: update to 1.7 2019-01-22 12:22:18 +00:00
tex-fp tex-fp{,-doc}: update to 2.1d 2019-01-30 08:47:04 +00:00
tex-fp-doc tex-fp{,-doc}: update to 2.1d 2019-01-30 08:47:04 +00:00
tex-kastrup
tex-kastrup-doc
tex-mathpartir tex-mathpartir{,-doc}: Add version 1.3.2 2018-01-18 11:00:44 +00:00
tex-mathpartir-doc tex-mathpartir{,-doc}: Add version 1.3.2 2018-01-18 11:00:44 +00:00
tex-mathspec Add tex-mathspec{,-doc} 0.2b 2017-06-23 23:28:29 +00:00
tex-mathspec-doc Add tex-mathspec{,-doc} 0.2b 2017-06-23 23:28:29 +00:00
tex-unicode-math tex-unicode-math{,-doc}: update to 0.8m 2019-01-25 18:32:05 +00:00
tex-unicode-math-doc tex-unicode-math{,-doc}: update to 0.8m 2019-01-25 18:32:05 +00:00
texdrive
TinySVM
tochnog
udunits Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
units
vista
vowpal_wabbit revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
wxmaxima Revbump after cairo 1.16.0 update. 2018-11-14 22:20:58 +00:00
xeukleides10 Comment out dead sites. 2017-09-06 10:40:25 +00:00
xfractint Update to 20.4.14. The changelog, while extremely long, only reaches back 2018-08-28 11:54:54 +00:00
xgap
xldlas Sort PLIST files. 2018-01-01 22:29:15 +00:00
xlife Requires termcap. 2017-05-09 16:30:25 +00:00
xlispstat Convert all occurrences (353 by my count) of 2017-01-19 18:52:01 +00:00
xmgr revbump for boost 1.69.0 2018-12-13 19:51:31 +00:00
xylib
yacas Recursive bump for perl5-5.28.0 2018-08-22 09:43:40 +00:00
yorick
z3 z3: Upgrade to 4.8.3 2018-12-18 06:46:39 +00:00
Makefile math: Add sc-im 2019-01-30 12:58:55 +00:00