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thor 3c66c4bf79 mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 
This delivers 64 bit index BLAS libraries alongside 32 bit ones. This is often
called ILP64 in the BLAS world, as opposed to LP64 where integers are 32 bit
due to the Fortran default integer type, not to be confused with the basic
system ABI used by C. For really large vectors on modern machines, you want
an 'ILP64' BLAS and layers on top of it.

In preparation of better support for vendor BLAS libraries, I had to realize
that you better use the C interfaces supplied by them, not the netlib one
strapped on. A simple reason of practicability: The vendor blas libraries,
just like openblas, like to ship all symbols in one library, so you get them
whether you want it or not. Also implementations may skip Fortran and implement
the underlying functionality directly in C anyway, so one might skip a
layer of indirection. Future will tell if other layers will follow. We still
have the framework of individual layers from Netlib to combine with certain
implementations that miss them (Accelerate framework comes to mind, which
needs further work).

The framework of netlib reference packages for the separate libraries
is instructive and helps keeping things small when you not need all of them.
The installation location of the headers is now in a subdirectory to be able
to have 32 and 64 bit variants independently. The 32 bit ones are linked to
${PREFIX}/include to keep the old picture. We could be brave and remove
those, but there is some value in a build just trying -lcblas and
inclusion of <cblas.h> to be happy.

There is one blas.buildlink3.mk that is supposed to be used only once and
so avoids a combination of conflicting libraries (as the 64 bit index symbols
have the same names as the 32 bit ones).

Basic usage for getting LAPACK+BLAS is still the same as before. You get
CBLAS and LAPACKE by setting BLAS_C_INTERFACE=yes in the package. The 64 bit
indices are selected via BLAS_INDEX64=yes.

Due to the special nature of the Accelerate framework, a package has to
explicitly indicate support for it and it will also not appear on the
list of implementations by default. The reason is that it does provide
mainly CBLAS and CLAPACK (another version of C interface to LAPACK, f2c-based)
and BLAS/LAPACK with f2c/g77 calling conventions. A default build with
gfortran would not like that

This commit also fixes up math/py-numpy and math/py-numpy16 to follow the
new scheme, as that are the only packages directly affected by the change
in CBLAS providership.
2021-06-15 04:41:51 +00:00
..
aamath
abs
admesh
algae
amath
analitza revbump for textproc/icu 2021-04-21 11:40:12 +00:00
antixls *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
aribas aribas: update download link 2021-04-24 19:36:25 +00:00
arpack-ng Update arpack-ng to 3.8.0 2021-05-11 10:18:37 +00:00
bc all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
bc-gh math/bc-gh: Update to 3.3.0 2021-02-17 16:51:17 +00:00
bcal bcal: Update to 2.2 2020-01-09 12:21:37 +00:00
blas mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
blas64 mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
blitz++ math: align variable assignments 2019-11-02 16:16:18 +00:00
boolstuff *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
calc
calcoo *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:19:01 +00:00
cantor *: bump PKGREVISION for poppler shlib bump 2021-06-10 11:06:19 +00:00
capc-calc
cblas mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
cblas64 mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
cgal request c++11, not c++03. some of the demos in this library need 2021-04-25 22:07:26 +00:00
classias
clisp-pari math: align variable assignments 2019-11-02 16:16:18 +00:00
cln all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
cloog math/cloog: remove unknown configure option --with-bits=gmp 2020-03-21 11:50:10 +00:00
coinmp coinmp: binary packages appear broken (wants some libstdc++.so.7)... 2020-10-10 16:10:27 +00:00
congen depend on ruby, as there are ruby scripts 2020-04-01 19:15:00 +00:00
crfsuite Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
dcdflib.c Don't build & install PIC libraries consistently. Bump revision. 2019-12-21 23:43:59 +00:00
dcdflib.f
dfftpack
dieharder *: recursive PKGREVISION bump for sneaky gsl shared library version number change 2021-06-01 09:12:22 +00:00
djbfft Remove DJB_RESTRICTED, no longer used. 2020-11-19 09:35:38 +00:00
djbsort Update to 20190516. From the changelog: 2021-02-18 10:08:31 +00:00
double-conversion math: align variable assignments 2019-11-02 16:16:18 +00:00
eigen2 eigen2: fix headers to avoid introducing errors in dependent packages. 2019-09-09 12:05:01 +00:00
eigen3 Update eigen3 to 3.3.9 2021-03-17 17:20:00 +00:00
eispack
erfa erfa: fix HOMEPAGE. 2021-01-07 21:42:50 +00:00
ess *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
eukleides eukleides: honor environment flags 2021-05-14 13:35:47 +00:00
eukleides10
euler *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:19:01 +00:00
fftpack
ffts
fftw fftw: bump for default options change 2021-06-12 07:30:47 +00:00
fftw-long split fftw package into -long and -quad precision variants 2021-05-16 10:14:09 +00:00
fftw-quad split fftw package into -long and -quad precision variants 2021-05-16 10:14:09 +00:00
fftw2 fftw2: Note in DESCR that this is egregiously old 2021-05-22 16:57:56 +00:00
fgmp
fityk *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:19:01 +00:00
flann-lib math/flann-lib: cleanup for proper distname among others 2021-05-03 09:26:42 +00:00
fplll Reset maintainership for all (no longer) mine packages 2020-07-13 19:45:45 +00:00
fricas *: Convert broken sourceforge HOMEPAGEs back to http 2020-03-20 11:57:53 +00:00
funst math/funst: reset maintainer 2021-04-24 19:44:52 +00:00
galculator *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
gap *: remove dead download link 2021-04-24 00:16:04 +00:00
gappa math/gappa, math/sollya: Cite upstreamed patches. 2020-07-17 17:30:13 +00:00
gcalctool revbump for textproc/icu 2021-04-21 11:40:12 +00:00
geg
genius *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
glpk all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
gnome-calculator *: Use the tools framework for itstool 2021-05-02 10:24:47 +00:00
gnumeric112 *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
go-units Revbump all Go packages after go116 update 2021-06-06 12:18:40 +00:00
gp-autpgrp *: remove dead download link 2021-04-24 00:16:04 +00:00
gp-factint *: remove dead download link 2021-04-24 00:16:04 +00:00
gp-fplsa *: remove dead download link 2021-04-24 00:16:04 +00:00
gp-grape *: remove dead download link 2021-04-24 00:16:04 +00:00
gp-grpconst *: remove dead download link 2021-04-24 00:16:04 +00:00
gp-lag *: remove dead download link 2021-04-24 00:16:04 +00:00
grace *: remove dead download link 2021-04-25 06:43:48 +00:00
graphopt
grpn *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:19:01 +00:00
gsl *: recursive PKGREVISION bump for sneaky gsl shared library version number change 2021-06-01 09:12:22 +00:00
gtklife *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:19:01 +00:00
harmbase2 Add harmbase2-20191229 2020-02-28 22:16:01 +00:00
harmgen math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
harminv math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
heirloom-factor
heirloom-units
herisvm Bump PKGREVISION by change of default Ruby version 2019-12-15 15:38:57 +00:00
hs-bifunctors *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-comonad *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-contravariant *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-distributive *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-ieee754 *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-integer-logarithms *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-math-functions *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-mwc-random *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-nats *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-profunctors *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-scientific *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-semigroupoids *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
hs-semigroups *: Bump PKGREVISION for ghc-9.0.1 2021-05-03 19:00:52 +00:00
ipopt math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
isl isl: updated to 0.24 2021-05-02 17:47:30 +00:00
itpp math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
kalgebra revbump for textproc/icu 2021-04-21 11:40:12 +00:00
kalker math/kalker: fix comment 2021-06-03 11:08:51 +00:00
kcalc revbump for textproc/icu 2021-04-21 11:40:12 +00:00
kissfft kissfft: add buildlink3.mk 2021-04-10 08:28:24 +00:00
lapack mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
lapack64 mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
lapacke mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
lapacke64 mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
libffm
libint all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
libixion revbump for boost-libs 2021-04-21 13:24:06 +00:00
liblbfgs
liblinear liblinear: updated to 2.43 2021-04-16 06:48:04 +00:00
libmatheval all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
libnumbertext libnumbertext: update to 1.0.7. 2021-02-18 10:20:30 +00:00
libquadmath libquadmath: mark only for x86 2021-05-20 06:12:53 +00:00
libshorttext Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
libsvm Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
linpack math/linpack, math/superlu: Convert to use new BLAS 2020-10-13 12:11:07 +00:00
lp_solve various fixes for arm64 big endian support. 2021-04-25 07:51:24 +00:00
ltm Assume non-VAX uses IEEE754 floats. While it doesn't make a difference 2020-09-14 18:23:41 +00:00
lua-cassowary Add lua-cassowary-2.2: 2020-08-06 23:36:51 +00:00
lumina-calculator revbump for textproc/icu 2021-04-21 11:40:12 +00:00
mapm
mathomatic
maxima *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
mcsim *: recursive PKGREVISION bump for sneaky gsl shared library version number change 2021-06-01 09:12:22 +00:00
meschach Always skip PIC libraries. Bump revisions. Add RCS IDs. 2019-12-20 00:02:06 +00:00
metis
minisat
minpack
mpcomplex math: align variable assignments 2019-11-02 16:16:18 +00:00
mpfi mpfi: Import mpfr-1.5.4 as math/mpfr 2020-05-19 14:44:04 +00:00
mpfr gmp,mpfr: Remove CONFIGURE_ARGS flags from builtin.mk as it assumes that 2020-09-03 08:58:42 +00:00
mprime-bin
mtl
muparser *: Convert broken sourceforge HOMEPAGEs back to http 2020-03-20 11:57:53 +00:00
newmat math: align variable assignments 2019-11-02 16:16:18 +00:00
nickle all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
nlopt
ntl *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
ocaml-num Recursive revbump associated with update of lang/ocaml 2021-03-08 08:12:45 +00:00
ocaml-zarith *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
octave octave: fix URL in comment 2021-06-14 22:39:01 +00:00
odepack
openaxiom Revbump packages depending on libffi after .so version change. 2020-03-08 16:42:24 +00:00
openblas mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
openblas64 mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
openblas64_openmp mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
openblas64_pthread mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
openblas_openmp mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
openblas_pthread mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
openfst math: align variable assignments 2019-11-02 16:16:18 +00:00
ordCalc all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
otter otter: update links 2021-04-25 06:36:52 +00:00
p5-Algorithm-BloomFilter *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Algorithm-Cluster *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Algorithm-Munkres *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Alien-GMP *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Excel-Template *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Excel-Template-Plus *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Base-Convert *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Base36 *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Base85 *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-BaseCnv *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Bezier *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-BigInt *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-BigInt-GMP *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-BigInt-Pari *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-BigInteger *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Calc-Units *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Derivative *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-FFT *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-GMP *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Int64 *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Int128 *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Matrix *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-MatrixReal *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Pari *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Permute-List *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Prime-Util *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Random *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Random-ISAAC *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Random-ISAAC-XS *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Random-MT *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Random-MT-Auto *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Random-MT-Perl *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Round *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Spline *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-Utils *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Math-VecStat *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Number-Compare *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Number-Latin *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Number-Range *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Number-Tolerant *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Number-WithError *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Roman *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Set-Crontab *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Set-Infinite *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Spreadsheet-ParseExcel *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Spreadsheet-Read *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Spreadsheet-ReadSXC *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Spreadsheet-WriteExcel *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Spreadsheet-XLSX *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Statistics-Basic *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Statistics-CaseResampling *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Statistics-Descriptive *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Statistics-Distributions *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Statistics-TTest *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
p5-Test-Number-Delta *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
pari *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
pari-galdata all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
pari23 *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
pcg
pear-Math_BigInteger Use https for pear.php.net. 2019-07-03 07:28:21 +00:00
pear-Numbers_Roman Use https for pear.php.net. 2019-07-03 07:28:21 +00:00
pear-Numbers_Words Use https for pear.php.net. 2019-07-03 07:28:21 +00:00
php-bcmath
php-stats math/php-stats: update PHP version 2021-01-03 06:47:07 +00:00
ppl *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
prng
pspp *: recursive PKGREVISION bump for sneaky gsl shared library version number change 2021-06-01 09:12:22 +00:00
py-abcpmc revert wrong fix for py-scipy python 3.6 deprecation, fix properly 2021-04-09 14:41:34 +00:00
py-almost
py-arviz revert wrong fix for py-scipy python 3.6 deprecation, fix properly 2021-04-09 14:41:34 +00:00
py-asdf py-asdf: updated to 2.7.3 2021-04-05 19:45:49 +00:00
py-asteval py-asteval: updated to 0.9.23 2021-03-12 13:11:50 +00:00
py-astroML (math/py-astroML) import py38-astroML-1.0 2020-12-19 14:42:39 +00:00
py-astroplan (math/py-astroplan) import py38-astroplan-0.7 2020-12-19 14:38:01 +00:00
py-astropy (math/py-astropy) import py38-astropy-4.2 2020-12-19 14:17:39 +00:00
py-astroquery (math/py-astroquery) Fix typo py-astro{4,} 2020-12-22 22:03:56 +00:00
py-autograd math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
py-bottleneck math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
py-cdecimal all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
py-claripy py-angr: update to version 9.0.7833 2021-06-02 23:27:10 +00:00
py-ephem Explicitly read files as unicode for Python 3. The content is converted 2020-05-31 20:49:32 +00:00
py-fftw py-fftw: fix PLIST 2021-05-20 06:12:14 +00:00
py-fpconst Changed PYTHON_VERSIONS_INCOMPATIBLE to PYTHON_VERSIONS_ACCEPTED; needed for future Python 3.8 2019-09-02 13:19:35 +00:00
py-gmpy
py-gwcs (math/py-gwcs) import py38-gwcs-0.15.0 2020-12-19 14:54:00 +00:00
py-infinity use versioned py-pygemnts 2021-04-06 14:36:48 +00:00
py-intervals use versioned py-pygemnts 2021-04-06 14:36:48 +00:00
py-jplephem (math/py-jplephem) import py38-jplephem-2.15 2020-12-19 14:23:00 +00:00
py-Keras-Applications py-Keras-Applications: mark as incompatible with Python < 3.7 2021-06-07 11:59:20 +00:00
py-Keras-Preprocessing math/py-Keras-Preprocessing: Import version 1.1.0 2020-01-01 16:31:21 +00:00
py-kiwisolver py-kiwisolver: updated to 1.3.1 2021-05-05 09:33:02 +00:00
py-libixion revbump for boost-libs 2021-04-21 13:24:06 +00:00
py-lmfit revert wrong fix for py-scipy python 3.6 deprecation, fix properly 2021-04-09 14:41:34 +00:00
py-mpmath py-mpmath: updated to 1.2.1 2021-05-12 08:32:16 +00:00
py-munkres all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
py-netCDF4 py-netCDF4: updated to 1.5.6 2021-05-07 18:31:59 +00:00
py-networkx py-networkx: updated to 2.5.1 2021-04-05 08:43:36 +00:00
py-noise
py-numarray Changed PYTHON_VERSIONS_INCOMPATIBLE to PYTHON_VERSIONS_ACCEPTED; needed for future Python 3.8 2019-09-02 13:19:35 +00:00
py-numba (math/py-numba) regen PLIST 2021-01-01 13:29:16 +00:00
py-Numeric Changed PYTHON_VERSIONS_INCOMPATIBLE to PYTHON_VERSIONS_ACCEPTED; needed for future Python 3.8 2019-09-02 13:19:35 +00:00
py-numexpr py-numexpr: updated to 2.7.3 2021-05-05 10:05:19 +00:00
py-numpy mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
py-numpy16 mk/blas.bl3, Netlib and OpenBLAS packages, NumPy: C fixup and 64 bits 2021-06-15 04:41:51 +00:00
py-pandas py-pandas: remove unneed patch 2021-05-06 04:39:45 +00:00
py-pandas-datareader propagate python incompatibilities 2021-04-09 15:42:35 +00:00
py-patsy math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
py-photutils (math/py-photutils) import py38-photutils-1.0.1 2020-12-19 14:56:04 +00:00
py-powerlaw revert wrong fix for py-scipy python 3.6 deprecation, fix properly 2021-04-09 14:41:34 +00:00
py-pyerfa (math/py-pyerfa) import py38-pyerfa-1.7.1.1 2020-12-19 14:26:57 +00:00
py-pymc3 revert wrong fix for py-scipy python 3.6 deprecation, fix properly 2021-04-09 14:41:34 +00:00
py-pyvo (math/py-pyvo) Fix typo py-astropy4 to py-astropy 2020-12-21 09:02:04 +00:00
py-pywavelets math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
py-quadprog py-quadprog: updated to 0.1.8 2020-12-06 10:46:49 +00:00
py-roman py-roman: updated to 3.3 2020-07-12 17:50:29 +00:00
py-rpy math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
py-Scientific revbump for boost-libs 2021-04-21 13:24:06 +00:00
py-Scientific-doc
py-scikit-image py-scikit-image: cascade py-tifffile Python incompatibilities 2021-03-05 04:16:57 +00:00
py-scikit-learn math/py-scikit-learn: drop ineffective SKLEARN_NO_OPENMP 2021-05-31 07:03:31 +00:00
py-scipy py-scipy: updated to 1.6.3 2021-05-03 17:55:01 +00:00
py-simpleeval py-simpleeval: updated to 0.9.10 2020-01-03 12:17:37 +00:00
py-sklearn-pandas propagate python incompatibilities 2021-04-09 15:42:35 +00:00
py-smt Import PySMT-0.9.0 as math/py-smt. 2020-08-18 20:14:33 +00:00
py-statsmodels Update py-statsmodels to 0.12.2 2021-04-06 12:16:47 +00:00
py-sympy py-sympy: updated to 1.8 2021-05-12 08:42:42 +00:00
py-tables math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
py-tensorboard
py-Theano revert wrong fix for py-scipy python 3.6 deprecation, fix properly 2021-04-09 14:41:34 +00:00
py-uncertainties py-uncertainties: updated to 3.1.5 2020-11-26 10:57:23 +00:00
py-xarray py-xarray: updated to 0.18.2 2021-05-20 12:58:13 +00:00
py-z3 Drop Python 2.7 restriction that isn't active anyway. 2020-05-31 20:47:23 +00:00
py-z3solver py-z3solver: update to version 4.8.9.0 2020-09-18 05:00:48 +00:00
qalculate revbump for boost-libs 2021-04-21 13:24:06 +00:00
qalculate-gtk revbump for boost-libs 2021-04-21 13:24:06 +00:00
qhull math/qhull: install the old non-reentrant lib for existing users 2021-06-15 04:07:20 +00:00
qrupdate math/qrupdate: mark phony targets phony (want to upstream patches) 2021-05-29 16:04:11 +00:00
quadpack
R Update to 4.1.0 2021-06-13 13:10:46 +00:00
R-abind Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-acepack Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-akima (math/R-akima) Updated 0.6.2 to 0.6.2.1, ChangeLog unknown 2021-01-03 11:23:32 +00:00
R-aplpack Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-backports (math/R-backports) Updated 1.1.4 to 1.2.1 2021-01-03 11:30:46 +00:00
R-bbmle Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-bitops Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-car Update to 3.0.10 2020-10-02 10:31:59 +00:00
R-carData Update to 3.0.4 2020-10-25 03:13:49 +00:00
R-CGIwithR revbump for boost-libs 2021-04-21 13:24:06 +00:00
R-chron (math/R-chron) Updated 2.3.53 to 2.3.56 2021-01-03 11:33:42 +00:00
R-circular Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-classInt (math/R-classInt) Add compiler.mk buildlink 2021-06-06 11:31:17 +00:00
R-clim.pact Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-coda Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-combinat R-combinat: set DIST_SUBDIR 2021-03-11 09:18:39 +00:00
R-compositions R-compositions: initial commit 2019-08-09 15:50:05 +00:00
R-DAAG (math/R-DAAG) Updated 1.22.1 to 1.24. 2020-09-20 21:58:36 +00:00
R-date Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-DBI Update to 1.1.1 2021-04-29 05:56:34 +00:00
R-DEoptimR R-DEoptimR: initial commit 2019-08-09 15:43:47 +00:00
R-dplyr (math/R-dplyr) Updated 1.0.0 to 1.0.6 2021-06-12 22:36:14 +00:00
R-e1071 Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-ellipsis (math/R-ellipsis) LICENSE= mit 2021-06-05 06:27:32 +00:00
R-emdbook Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-energy R-energy: initial commit 2019-08-09 15:42:02 +00:00
R-estimability Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-FNN Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-forcats (math/R-forcats) Updated 0.4.0 to 0.5.1 2021-06-06 13:45:50 +00:00
R-forecast Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-Formula Update to 1.2.4 2020-10-25 03:19:22 +00:00
R-fracdiff Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-gdata *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
R-generics (math/R-generics) Updated 0.0.2 to 0.1.0 2021-06-05 15:14:01 +00:00
R-genetics *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
R-geoR Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-goftest math/R-goftest: remove MASTER_SITES 2020-08-09 17:07:33 +00:00
R-GRASS Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-gss Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-gstat math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
R-gtable Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-gtools Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-httpRequest Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-hwde Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-igraph revbump for textproc/icu 2021-04-21 11:40:12 +00:00
R-intervals Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-ISLR Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-ISwR (math/R-ISwR) Updated 2.0.7 to 2.0.8. NEWS.md not recorded 2020-09-20 22:55:50 +00:00
R-LearnBayes math/R-LearnBayes: remove MASTER_SITES 2020-08-09 17:05:12 +00:00
R-lme4 Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-lmm Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-lmtest Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-mapproj (math/R-mapproj) Updated 1.2.6 to 1.2.7, NEWS.md unknown 2021-06-06 07:22:40 +00:00
R-maps Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-MatrixModels Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-minqa Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-mitools Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-mnormt math/R-mnormt: remove MASTER_SITES 2020-08-09 16:42:15 +00:00
R-moonsun Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-mvtnorm Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-ncdf revbump for boost-libs 2021-04-21 13:24:06 +00:00
R-nimble Add missing R-R6 dependency 2020-09-20 03:19:05 +00:00
R-nloptr math/R-nloptr: remove no-op SUBST block 2020-05-03 07:44:53 +00:00
R-nortest Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-numDeriv Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-pbkrtest Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-PHYLOGR (math/R-PHYLOGR) Updated 1.0.10 to 1.0.11. NEWS.md not recorded 2020-09-20 23:00:09 +00:00
R-pixmap Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-plyr R-plyr: update to 1.8.6. 2020-07-31 18:37:34 +00:00
R-poweRlaw Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-prettyunits (math/R-prettyunits) Updated 1.0.2 to 1.1.1 2021-06-05 06:11:08 +00:00
R-prob Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-proxy math/R-proxy: import R-proxy-0.4.25 2021-06-06 08:07:17 +00:00
R-psych math/R-psych: remove MASTER_SITES 2020-08-09 16:45:23 +00:00
R-quadprog Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-quantreg math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
R-R2HTML Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-RandomFields math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
R-RandomFieldsUtils Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-randomForest Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-RArcInfo Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-Rcmdr (math/R-Rcmdr) Updated 2.7.0 to 2.7.1 2021-01-02 11:22:48 +00:00
R-RcmdrMisc (math/R-RcmdrMisc) Updated 2.5.1 to 2.7.1, make test fails for now 2020-09-20 23:38:08 +00:00
R-RColorBrewer Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-RcppArmadillo Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-RcppEigen (math/R-RcppEigen) Updated 3.3.5.0 to 3.3.9.1 (make test fails for now) 2021-01-03 10:04:58 +00:00
R-relimp Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-reshape2 (math/R-reshape2) Updated 1.4.3 to 1.4.4 2021-06-06 06:38:29 +00:00
R-RNetCDF revbump for boost-libs 2021-04-21 13:24:06 +00:00
R-robustbase R-robustbase: initial commit 2019-08-09 15:48:20 +00:00
R-RPostgreSQL Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-rstudioapi (math/R-rstudioapi) Updated 0.10 to 0.11 2020-09-20 14:50:51 +00:00
R-sandwich Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-sgeostat Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-shapefiles Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-sp Update to 1.4.5 2021-06-13 12:46:04 +00:00
R-spacetime Update to 1.2.4 2021-06-13 13:04:37 +00:00
R-SparseM (math/R-SparseM) Updated 1.77 to 1.78 (make test fails for now) 2021-01-03 10:49:31 +00:00
R-splancs Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-stabledist Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-statmod Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-stringdist (math/R-stringdist) import R-stringdist-0.9.5.5 2020-02-10 14:21:00 +00:00
R-survey Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-tensor math/R-tensor: remove MASTER_SITES 2020-08-09 17:08:55 +00:00
R-tensorA R-tensorA: initial commit 2019-08-09 15:46:29 +00:00
R-tibble (math/R-tibble) Update DEPEDNDS version for R-pillar 2021-06-06 23:39:26 +00:00
R-tidyr R-tidyr: update from 0.8.3 to 1.0.2. 2020-07-31 21:49:29 +00:00
R-units (math/R-units) Updated 0.6.5 to 0.7.1 2021-06-06 11:52:55 +00:00
R-urca Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-vctrs (math/R-vctrs) Updated 0.3.2 to 0.3.8 2021-05-30 13:18:59 +00:00
R-VGAM Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-XML revbump for textproc/icu 2021-04-21 11:40:12 +00:00
R-xtable Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-xts (math/R-xts) Updated 0.11.2 to 0.12.1 2021-06-06 15:12:59 +00:00
R-zeallot Update all R packages to canonical form. 2019-08-08 19:53:36 +00:00
R-zoo (math/R-zoo) Updated 1.8.6 to 1.8.9 2021-06-06 15:08:56 +00:00
randlib randlib: update to 1.3nb1. 2019-12-28 11:47:34 +00:00
ranger math: align variable assignments 2019-11-02 16:16:18 +00:00
ruby-gsl *: recursive PKGREVISION bump for sneaky gsl shared library version number change 2021-06-01 09:12:22 +00:00
ruby-narray all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
ruby-roo math/ruby-roo: update to 2.8.3 2020-03-08 16:06:05 +00:00
ruby-spreadsheet math/ruby-spreadsheet: update to 1.2.9 2021-05-30 09:33:10 +00:00
sc sc: Update to version 7.16_1.1.2 2019-06-01 06:35:33 +00:00
sc-im revbump for boost-libs 2021-04-21 13:24:06 +00:00
scilab Recursive revbump associated with update of lang/ocaml 2021-03-08 08:12:45 +00:00
slatec all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
snns math: align variable assignments 2019-11-02 16:16:18 +00:00
sollya revbump for textproc/icu 2021-04-21 11:40:12 +00:00
speedcrunch revbump for textproc/icu 2021-04-21 11:40:12 +00:00
stan-math all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
statist
sundials math: align variable assignments 2019-11-02 16:16:18 +00:00
superlu *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
svmlin all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
tasp-vsipl Don't install PIC libs to avoid different PLISTs depending on the 2019-12-19 22:20:01 +00:00
teapot all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
tex-apnum all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
tex-apnum-doc all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
tex-fp all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
tex-fp-doc all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
tex-kastrup tex-*: add TEXLIVE_UNVERSIONED=yes 2019-12-06 19:00:17 +00:00
tex-kastrup-doc tex-*: add TEXLIVE_UNVERSIONED=yes 2019-12-06 19:00:17 +00:00
tex-lualatex-math tex-lualatex-math{,-doc}: add version 1.9 2021-02-12 03:18:12 +00:00
tex-lualatex-math-doc tex-lualatex-math{,-doc}: add version 1.9 2021-02-12 03:18:12 +00:00
tex-mathpartir all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
tex-mathpartir-doc all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
tex-mathspec tex-mathspec: dependency tex-ifxetex -> tex-iftex 2020-05-02 03:13:54 +00:00
tex-mathspec-doc all: migrate several HOMEPAGEs to https 2020-01-18 23:30:43 +00:00
tex-minifp tex-minifp{,-doc}: Add version 0.96 2020-05-22 03:10:33 +00:00
tex-minifp-doc tex-minifp{,-doc}: Add version 0.96 2020-05-22 03:10:33 +00:00
tex-physics tex-physics{,-doc}: add version 1.3 2021-03-18 03:46:00 +00:00
tex-physics-doc tex-physics{,-doc}: add version 1.3 2021-03-18 03:46:00 +00:00
tex-unicode-math tex-unicode-math{,-doc}: update to 0.8q texlive 2020 version 2020-04-27 02:20:52 +00:00
tex-unicode-math-doc tex-unicode-math{,-doc}: update to 0.8q texlive 2020 version 2020-04-27 02:20:52 +00:00
texdrive all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
TinySVM
tochnog *: Convert broken sourceforge HOMEPAGEs back to http 2020-03-20 11:57:53 +00:00
udunits math/udunits: update to udunits2 v2.2.26. 2020-08-08 21:55:54 +00:00
units Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
vista
volk revbump for boost-libs 2021-04-21 13:24:06 +00:00
vowpal_wabbit revbump for boost-libs 2021-04-21 13:24:06 +00:00
wxmaxima revbump for textproc/icu 2021-04-21 11:40:12 +00:00
xeukleides10
xfractint *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:19:01 +00:00
xgap *: remove dead download link 2021-04-24 00:16:04 +00:00
xldlas
xlife
xlispstat
xmgr *: recursive bump for perl 5.34 2021-05-24 19:49:01 +00:00
xyconvert revbump for textproc/icu 2021-04-21 11:40:12 +00:00
xylib Stop using boost/detail/endian.hpp 2020-05-09 15:19:02 +00:00
yacas *: recursive PKGREVISION bump for sneaky gsl shared library version number change 2021-06-01 09:12:22 +00:00
yices2 Reset maintainership for all (no longer) mine packages 2020-07-13 19:45:45 +00:00
yorick yorick: set LICENSE 2021-05-15 06:53:50 +00:00
z3 Recursive revbump associated with update of lang/ocaml 2021-03-08 08:12:45 +00:00
Makefile p5-Math-Interpolate: remove 2021-06-07 14:11:55 +00:00