e31ffa14e6
Part of PR pkg/55755. This is Schroedinger, Inc's 2D coordinate generation. It was formerly proprietary code, but is now released under the BSD license. The emphasis of these algorithms are on quality of 2D coordinates rather than speed of generation. The algorithm distinguishes itself from many others by doing well with both macrocycles and metal complexes. It also does extremely well on typical drug-like small molecules, and has been validated on millions of compounds.
61 lines
1.1 KiB
Makefile
61 lines
1.1 KiB
Makefile
# $NetBSD: Makefile,v 1.58 2020/11/03 20:17:59 bsiegert Exp $
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#
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COMMENT= Software for the biological sciences
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SUBDIR+= R-popbio
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SUBDIR+= arka
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SUBDIR+= azara
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SUBDIR+= bcftools
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SUBDIR+= bioperl
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SUBDIR+= bodr
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SUBDIR+= bwa
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SUBDIR+= canu
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SUBDIR+= cdhit
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SUBDIR+= chemical-mime-data
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SUBDIR+= chemtool
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SUBDIR+= clustalw
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SUBDIR+= coalesce
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SUBDIR+= coordgenlibs
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SUBDIR+= fastDNAml
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SUBDIR+= fastp
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SUBDIR+= fluctuate
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SUBDIR+= gabedit
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SUBDIR+= genesplicer
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SUBDIR+= glimmer
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SUBDIR+= gnome-chemistry-utils
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SUBDIR+= gp
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SUBDIR+= gromacs
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SUBDIR+= hisat2
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SUBDIR+= hmmer
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SUBDIR+= htslib
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SUBDIR+= kallisto
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SUBDIR+= lucy
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SUBDIR+= maeparser
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SUBDIR+= mopac
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SUBDIR+= mpqc
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SUBDIR+= mummer
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SUBDIR+= ncbi-blast+
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SUBDIR+= nut
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SUBDIR+= openbabel
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SUBDIR+= p5-Bio-ASN1-EntrezGene
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SUBDIR+= pdbalign
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SUBDIR+= phylip
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SUBDIR+= plink
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SUBDIR+= plinkseq
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SUBDIR+= primer3
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SUBDIR+= profit
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SUBDIR+= puzzle
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SUBDIR+= py-biopython
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SUBDIR+= py-mol
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SUBDIR+= py-pydicom
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SUBDIR+= rasmol
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SUBDIR+= samtools
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SUBDIR+= sewer
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SUBDIR+= stacks
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SUBDIR+= stride
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SUBDIR+= trimmomatic
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SUBDIR+= vsearch
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SUBDIR+= xylem
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.include "../mk/misc/category.mk"
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